| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4425443 | 51 (0.950) | 3 (0.060) | 3/256 | NT | 5.7% | coding (326/396 nt) | rpsF | 30S ribosomal subunit protein S6 |
| ? | NC_000913 | = 4425453 | 49 (0.930) | coding (336/396 nt) | rpsF | 30S ribosomal subunit protein S6 | |||||
CTCCGCAGGAAGTGATCGATGAGCTGGAAACTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACCGTCTGGTGTTGTCCGGCACCGTGTGCAGGGCTCCCCTTCGAAAGGTCAGTCCATCAGGAATTCCTC > NC_000913/4425314‑4425595 | cTCCGCTGGAAGTGATCGAGGGGCTGGAAAGTACCTCCCGCTTCGACTATGCCGTTATCCGCATCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTcgc > 2:1020374‑M2/1‑140 (MQ=255)cTCCGCAGGAAGTGATCGATGAGCTGGAAACTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTcgc < 1:577348‑M2/143‑4 (MQ=255) tCCGCAGGAAGTGATCGATGAGCTGGAAACTACCTTCCGCTTCAACGATGCCGTTATGCGCAGCATGGTGATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTcgcg > 1:944515/1‑143 (MQ=255) tCCGCAGGAAGTGATCGATGAGCTGGAAACTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGAGAGCGTcgcg > 1:342085/1‑143 (MQ=255) cGCAGGAAGTGATCGATGAGCTGGAAACTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCgat > 1:581806/1‑143 (MQ=255) gCAGGAAGTGATCGATGAGCTGGAAACTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCgatg < 1:493097/143‑1 (MQ=255) ggAAGTGATCGATGAGCTGGAAACTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCACGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGAtt > 2:722765/1‑143 (MQ=255) aaGTGATCGATGAGCTGGAAACTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTc < 2:94839/143‑1 (MQ=255) gtCGATGCGCTGGAACCCCCCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAACCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCaaa < 1:549980/142‑1 (MQ=255) tgggCTGGAAACTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGaaa < 1:14343/140‑1 (MQ=255) tGGAAACTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGATGATACCGAAGCATCTCCGATGGTTAAAGCGAGAGACGAGCGCCGTGAGCGTCGCGATGACTTCGCAAACGAAACAGCt > 2:401065/1‑143 (MQ=255) aaCTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCACACGAAACCGCtgatg > 1:890255/1‑143 (MQ=255) aCTCCCTTCCGCTTCAACGATGCGGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTGCCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCtgatga < 2:1047197/143‑1 (MQ=255) tACGTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGatgatg < 2:726578/143‑1 (MQ=255) tCCGCTTCAACGATGCCGTTATCCGCAGCATGGTGATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCCCGATGCTTTCGCAAACGAAACCGCTGATGATGCTGaa < 2:20297/143‑1 (MQ=255) cTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTAGCAAGCACGCTGTTGCCGAAGGGTCGCCGAGGGTTAAAGCGAAAGACGAGCGGGGGGAGCGTGGCGATGGTTTCGCCAACGGAACCGCTGATGATGCTGAAGGTg > 1:526527/1‑143 (MQ=255) ttCAACGATGCCGTTATCCGCAGCATGGTTATTCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCACACGAAACCGCTGCTGATCCTGAAGCTgt > 2:203478/1‑142 (MQ=255) ttCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTgg < 1:360354/143‑1 (MQ=255) ttCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTgg > 2:203472/1‑143 (MQ=255) ttCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTgg > 2:203473/1‑143 (MQ=255) cAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGCCGAACGCAGAGAGCGTCGCGATTATTTCGCAAACGAAACCGCTGATGATGCTGCAGCTgcgg > 1:485105/1‑143 (MQ=255) gTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCACTGATGATGCTGAAGCTGGGGATTCTGAaga > 1:733448/1‑143 (MQ=255) gTTACCCGCAGCATGGTGATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATGTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAaga < 2:204139/143‑1 (MQ=255) tCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGaaa > 2:899572/1‑143 (MQ=255) ccGCAGCATGGTTATGCGTACCACGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAAt < 1:216355/143‑1 (MQ=255) ccGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAAt > 2:318316/1‑143 (MQ=255) caTGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCGGCGAGAGTCGCGATGGTTTGGAATAAAATATTGCTTATGATGCTGAAGCTGGGGGATCTGAAGAGGAATTTCtcg > 2:1023447/1‑141 (MQ=255) caTGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCtga < 1:39108/143‑1 (MQ=255) caTGGTTAGGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCtga < 2:577348/143‑1 (MQ=255) ttATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGATGGGGATTCTGAAGAGTAATTTCTGATGAcc > 1:314353/1‑143 (MQ=255) tgaTGCGGACCCAGCACGCGGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGAcc < 2:16094/141‑1 (MQ=255) tGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAAc < 1:203473/143‑1 (MQ=255) tGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAAc > 1:1052681/1‑143 (MQ=255) tGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAAc < 1:203472/143‑1 (MQ=255) tGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAAc < 1:203478/143‑1 (MQ=255) tACCGAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGCTGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACCGTc < 2:879703/143‑1 (MQ=255) ccAAGCACACTGTTACCGAAGCAGCTCCGAGGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACCGTCTg < 1:393388/143‑1 (MQ=255) aaGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAGCCGTCTGgt > 1:229539/1‑143 (MQ=255) cGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACCGTCTGGtgttgt < 1:272881/143‑1 (MQ=255) gCTGGTACCGGAGCATCTCCGAGGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAGACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACCGTCTGGTGTTGTc < 2:545486/143‑1 (MQ=255) ttACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAACCCGCTGATGATGCTGAAGCTCGGGATTCTGAAGAGTAATTTCTGATGTCCCACCGTCGCGTGTTGTACgtg > 2:367512/1‑141 (MQ=255) ttACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGAGCAACCGGCTGGTGTTGTCCGGc > 2:801812/1‑143 (MQ=255) aCCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACCGTCTGGTGTTGTCCGGCAc > 1:803410/1‑143 (MQ=255) cGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGCCCAACCGGCTGGTGTTGTCCTGCACCg > 2:333110/1‑143 (MQ=255) gAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACCGTCTGGTGTTGTCCGGCACCgt < 1:318316/143‑1 (MQ=255) tcCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACCGTCTGGTGTTGTCCGACACCGTCTGcggac > 2:1013249/1‑139 (MQ=255) gagggctAAAGCGAAAGACGAGCGTCGTGAGCGGCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGCTGACCCACCGTCTGGTGTTGTCCGGCACCGTGTGCAGGGCTc < 2:374371/137‑1 (MQ=255) tAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACCGTCTGGTGTTGTCCGGCACCGTGTGCAGGGCTCCGCtta > 1:757673/1‑142 (MQ=255) aagggcGAGGGCCGTGCGCGTCGCGATGATGTCGCACAGGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGGAGAGTAAGTTCTGATGAGCAACCGTCTGGTGTTGTCCGGCACCGTGCGCAGGGCTCCCCTTCGAAAGGt < 2:98992/138‑1 (MQ=255) aaaGACGAGCGCCGTGAGCGTcgcgatgatttcgctttaaccatcggagatgcttcggtaacagcgtgcttggtacgcataaccatgctgcggataacggcatcgttgaagcggaaggtagtttccagctcatcgatcacttc < 1:158256‑M2/143‑123 (MQ=255) aaaGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACCGTCTGGTGTTGTCCGGCACCGTGTGCAGGGCTCCCCTTCGAAAGGt < 2:342085/143‑1 (MQ=255) aaGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACCGTCTGGTGTTGTCCGGCACCGTGTGCAGGGCTCCCCTTCGAAAGGTc > 2:667895/1‑143 (MQ=255) aGACGAGCGCCGTGAGCGTcgctcgtctttcgctttaaccatcggagatgcttcggtaacagcgtgcttggt > 2:376199‑M2/1‑19 (MQ=255) aGACGAGCGCCGTGAGCGTcgctcgtctttcgctttaaccatcggagatgcttcggtaacagcgtgcttggt < 1:376199‑M2/72‑54 (MQ=255) aGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCCGGGGATTCTGAAGAGTAATTTCTGATGACCAACCGTCTGGTGTTGTCCGGCACCGTGTGCAGGGCTCCCCTTCGAAAGGTCa < 2:615808/143‑1 (MQ=255) gAGCGCCGCGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACCGTCTGGTGTTGTCCGGCACCGTGTGCAGGGCTCCCCTTCGAAAGGTCAGTcc < 1:618963/143‑1 (MQ=255) gcCGTGAGCGTCGGGATGATTTCGCAAACGAAACCGCTGAGGATGCTGAAGCTGGGGATTCTGAAGAGTAATGGCTGATGACCAACCGTCTGGTGTTGTCCGGCACCGTGTGCAGGGCTCCCCTTCGAAAGGTCAGTCCATCa < 2:55054/143‑1 (MQ=255) tGAGCGCCGCGATGATTTCGCACACGAAACCGCTGATGATGCTCAAGCTGGGGATTCTGAAGAGTAATTTCGGATGGCCAACCGCCTGGTGTTGTCCGGCACCGTGTGCAGGGCTCCCCTTCGAAAGGTCAGTCCATCAGGaa < 2:1038918/143‑1 (MQ=255) gcggcgCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACCGTCTGGTGTTGTCCGGCACCGTGTGCAGGGCTCCCCTTCGAAAGGTCAGTCCATCAGGAATTc < 1:628849/143‑1 (MQ=255) gTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACCGTCTGGTGTTGTCCGGCACCGTGTGCAGGGCTCCCCTTCGAAAGGTCAGTCCATCAGGAATTCCt > 1:92965/1‑143 (MQ=255) tCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACCGTCTGGTGTTGTCCGGCCCCGTGTGCAGGGCTCCCCTTCGAAAGGTCAGTCCATCAGGAATTCCTc > 1:366795/1‑143 (MQ=255) tCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACAGTCTGGTGTTGTCCGGCACCGTGTGCAGGGCTCCCCTTCGAAAGGTCAGTCCATCAGGAATTCCTc > 1:882596/1‑143 (MQ=255) | CTCCGCAGGAAGTGATCGATGAGCTGGAAACTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACCGTCTGGTGTTGTCCGGCACCGTGTGCAGGGCTCCCCTTCGAAAGGTCAGTCCATCAGGAATTCCTC > NC_000913/4425314‑4425595 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |