| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,708,428 | T→A | 9.4% | intergenic (‑723/+188) | dppA ← / ← proK | dipeptide ABC transporter periplasmic binding protein/tRNA‑Pro |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,708,428 | 0 | T | A | 9.4% | 143.6 / 10.1 | 65 | intergenic (‑723/+188) | dppA/proK | dipeptide ABC transporter periplasmic binding protein/tRNA‑Pro |
| Reads supporting (aligned to +/- strand): ref base T (24/34); new base A (4/2); total (28/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.06e-01 | |||||||||||
GCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCC‑CTGCCCCCGGAGGTTCTCATCCTC > NC_000913/3708286‑3708565 | gCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGt > 1:74275/1‑143 (MQ=255) gcgcCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCCTGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCa < 1:202390/143‑1 (MQ=255) gtCCGACAATGGCCGGCACATTTGCCTGATGCGACGCGGACGCGGCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCAACGAGCAGGCtttt < 1:176003/142‑1 (MQ=21) aTCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCtttt > 2:891677/1‑143 (MQ=255) tCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTc > 1:730167/1‑143 (MQ=255) tCCCACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTc < 1:975525/143‑1 (MQ=255) ccGACAATGGCCGGCACATTTTCTTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCAACGAGCAGGCtttttt < 1:76651/143‑3 (MQ=21) cGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AACAAAGCCTGCTCGTTGAGCAGGCTGTACGa > 2:786372/1‑143 (MQ=255) aaTGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGCTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCACGTTGTGCAGCCTTGTCGAAttt > 2:500642/1‑143 (MQ=21) aaTGGCCGGCACATTGGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAAttt < 1:626734/143‑1 (MQ=255) gtGGCCGGCACAGGTGCCTGCGGCGACGCTGACGCGCCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGACCACGGGGTGTCTGATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTg < 2:422626/142‑1 (MQ=18) gCCGGCATGTTGGCTGGATGCGACGCTGACGCGTCTTATCAGGGCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTc < 2:790643/143‑1 (MQ=17) ccGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCg > 2:739723/1‑143 (MQ=255) ggCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCCGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGt < 1:864126/143‑1 (MQ=255) gCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTg < 1:16783/143‑1 (MQ=255) cccccctGCCTGAGGCGTCCCTGCCGCGTCTTCTCAGGCCTAGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGa < 2:479160/137‑1 (MQ=14) caTTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATa < 1:632388/143‑1 (MQ=255) aTTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑CCAAAAGCCTGCCCGTCGAGCCGGCCCTTCGACTTCCGTCGGtcacac > 2:770176/1‑138 (MQ=18) tttGCCTGATGCGACGCTGCCGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATaga < 2:616531/143‑1 (MQ=255) tttGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTGTTCGAATTTGGTCGGTGATaga > 1:402117/1‑143 (MQ=255) tcgCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCAGGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATagag < 2:49797/141‑1 (MQ=255) tGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCAGCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAgg < 2:125139/143‑1 (MQ=255) ggCCTGATGCGACGCTGACGCGTCTTAGCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCAGCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAgg < 2:66682/142‑1 (MQ=255) gcctcctGCGACGCTGCCGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCAGCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGa < 2:548274/137‑1 (MQ=255) gCCCGATGCGCCGCTGACGCGTCCTCTCAGGCCTACGTCGAGTCGACCCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGa < 1:4431/143‑1 (MQ=17) gATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAACAAGCCTGCTCGTTGAGCAGGCTTTTCGACTTTGGTCGGTGATACAGGCttcg > 2:657135/1‑141 (MQ=255) cgccGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACGTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGc < 2:104245/140‑1 (MQ=255) cGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCCTAGc > 2:80868/1‑143 (MQ=255) cGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGc < 1:770213/143‑1 (MQ=255) gACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGACTGTCGTCTGTGATAGAGGATTAGTCGcc > 2:963411/1‑143 (MQ=17) gACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGcc < 1:906135/143‑1 (MQ=255) aCGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGCGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGCGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCa > 1:424348/1‑143 (MQ=255) aCGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCa > 1:410462/1‑143 (MQ=255) gCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACATCCCTGCCCCAGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCATTTCGAAGATGGAAGGTGAAAGAGGAGTACTCGACACt > 2:200022/1‑143 (MQ=17) tGACGCGTCTTATCAGGCCTACGTCGAGGCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGCGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTc < 1:211651/143‑1 (MQ=255) ttATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAACGCCTCCTCGTTGAGCAGGCCTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTACGTGGCTctc > 1:1016695/1‑141 (MQ=255) tCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACGTCGTGGCTCGcccg > 1:129399/1‑142 (MQ=255) aGGCCTAGGTCGAGTCGAACCTCCCGGCCCCCGGAGGTTCTCATCCTCATGGGCTGGAAAAAT‑GAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGc < 1:1045142/143‑1 (MQ=17) gCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCCTCCTCATGAGCTGCAGATGC‑AAGAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGGCGGGGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCgg < 2:516268/143‑1 (MQ=255) ttACGCCGAGTCTAACCTCCCGGCCCCCGGAGGTTCTCATCCTCACGAGCTGCAGATGC‑AAAAAAGCCTGCACGTTGAGCATGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGc < 2:353973/142‑1 (MQ=17) gtcgaACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCCCTTCGTGGCTCGCCCCGCGGGCCGTCGCTgc > 1:127566/1‑142 (MQ=255) tcgaGCCTCCCTGCCCCCGGGGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAGAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGgc < 2:153273/143‑1 (MQ=255) tcgaACCTCCCTGCCCCCGGAGGGCCGCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGgc < 1:32630/143‑1 (MQ=255) gaACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGCGCTGCAGATGCAAAAAAAGCCTGCTCGTTGCGCAGGCTTTTCGAATTTGGTCGCGGATAGGGGTTTACTCGCCACCGCGCGGCGCGCCCGGCCGCCGGGTGCAGgcg > 1:312409/1‑143 (MQ=14) ccTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTtc > 1:416687/1‑143 (MQ=255) ccccGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCtcg < 1:891677/143‑1 (MQ=255) cGGTGGTCCTCGTCCGGATGAGCTGCGGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTGTTCGAATTTGGTGGGTGATAGAGGATCACTCGCCACTGCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCtcgctt < 2:198980/143‑1 (MQ=21) ttCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTGCCTCGCTCGCCCTGCGGGCCGTTGCTGGCGCACCGCTCTCTCCCCCCGCTCg > 2:399987/1‑143 (MQ=18) tcATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGt < 1:120925/143‑1 (MQ=255) cATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGCGGCCCGCCCTGCGGGCCGTCGCTGGCGCACCGTGCCCTCGCCTCGCTCGAggc > 2:348801/1‑141 (MQ=21) tgggtgtcAGATGC‑AAAAGCGCCTGCGCGTGTAGCAGGCTTTTCGAATTTGGCCGGTGTTGGTTGATTTTGCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTcc < 2:369579/136‑1 (MQ=255) tGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTcc < 1:364526/143‑1 (MQ=255) gAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGCActaact > 1:647040/1‑138 (MQ=255) cAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCCTCGCTCCAGCCGACCCTCC‑ATGcccc > 2:586779/1‑143 (MQ=37) aGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTACGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCC‑CTGccccc < 2:524465/143‑1 (MQ=255) c‑AAGAAGGCCGGCTCGTTGAGCAGGCTTTGCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCCGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCC‑CTGCCCCCGGAgg < 2:933720/143‑1 (MQ=38) aaaaGCCTGCTCAACGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGTGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGCACCTCC‑CTGCCCCCGGAGGCtc > 2:683592/1‑143 (MQ=38) aaaaGCCTGCTCAACGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCC‑CTGCCCCCGGAGGTtc > 2:299095/1‑143 (MQ=255) aaGCCTGCTCGTTGGGCAGGCTTTTCGACTTTGCTCGGTGATATAGGATTACTCGCCACTTCGTGGCCCGCCCGGCGGGCCGCTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCC‑CTGCCCCCGGAGGTtctc < 2:416687/143‑1 (MQ=255) aaGCCTGCTCAACGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCCTCGCCCGAGTCGAACCTCC‑CTGCCCCCGGAGGCtccc > 2:915687/1‑141 (MQ=38) aaGCCTGCTCAACGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTAGCGCAACGTTCTCTCGCTTCGCTCGCGTCGAACCTCC‑CTGCCCCCGGAGGCtctc > 1:117170/1‑143 (MQ=38) gCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATCCCTCCCCACTTCGCGGCTCGCCCGGCGGGCCGTTGCCGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCC‑CTGCCCCCGGAGGTTCTCAt < 2:79017/143‑1 (MQ=38) ccTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCC‑CTGCCCCCGGAGGTTCTCATc < 1:786372/143‑1 (MQ=255) ccTGCTCGGTGAGTATCCTGTTCGGATTTGTGCGGTGCGGGAGGATTCCTCGCCACTTCGTGGCTCGCTCGGCGGGCCGTTGCTGGCGCAACGTTCTCGCGCTTCGCTCGAGTCGAACCTCC‑CTGCCCCCGGAGGTTCTCATc < 2:565892/143‑1 (MQ=25) tGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGACGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCC‑CCGCCCCCGGAGGCTCTCATCCt > 2:517924/1‑143 (MQ=255) gCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAGCGTTATCTGGCTTCGCTCGCGTCG‑CCCTCCGCTGCTCGCGGAGCTTTTCAGCCTc > 1:937337/1‑143 (MQ=25) | GCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGC‑AAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCC‑CTGCCCCCGGAGGTTCTCATCCTC > NC_000913/3708286‑3708565 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |