Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 78,830 T→A 6.9% intergenic (+31/+18) setA → / ← leuD sugar exporter SetA/3‑isopropylmalate dehydratase subunit LeuD

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091378,8300TA 6.9% 169.9 / 3.8 58intergenic (+31/+18)setA/leuDsugar exporter SetA/3‑isopropylmalate dehydratase subunit LeuD
Reads supporting (aligned to +/- strand):  ref base T (23/31);  new base A (2/2);  total (25/33)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.63e-01

CGTTATTCAGGGAGCAATTGCACAAAGTTGGGGGCACTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATGGCGTCGTCGTGCTGCAAGGTAAGCCCAATACTGTCCAGACCGTTCATCATGCAGTGGCGGCGGAAGGCATCGATGGTAAAGC  >  NC_000913/78688‑78972
                                                                                                                                              |                                                                                                                                              
cGTTATTCAGGGAGCAATTGCACAAAGTTGGGGGCACTTTGCTGTCTACTGGGTAATTGCGGTTCTTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGCCGATAGCGGAAAGCCCGGCCAt                                                                                                                                                >  2:109813/1‑143 (MQ=255)
 gtgaTTCAGGGAGCGATTGCACCAAGTTGGGTGCACTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCAtt                                                                                                                                               <  2:892082/140‑1 (MQ=255)
 gTTATTCAGGGAGCAATTGCACAAAGTTGGGGGCACTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCAtt                                                                                                                                               >  2:988730/1‑143 (MQ=255)
  ttATTCAGGGAGCAATTGCACAAAGTTGGGGGCACTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCCTAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCAttt                                                                                                                                              >  1:497974/1‑143 (MQ=255)
    gttCAGGGAGTATGTGCAGAAAGTTGGGCGCGCTGGTCTGTCTATTGGGGAGTTGCGGTTATTTCTGTTGTCGTATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGa                                                                                                                                            <  2:506692/142‑1 (MQ=255)
    aTTCAGGGAGCAATTGCACAAAGTTGGGGGCACTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGa                                                                                                                                            >  2:241640/1‑143 (MQ=255)
     ttCAGGGAGCAATTGCACAAAGTTGGGGGCACTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCAAATGAc                                                                                                                                           >  1:308175/1‑143 (MQ=255)
       cAGGGAGCAATTGCACAAAGTTGGGGGCACTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCg                                                                                                                                         <  1:603167/143‑1 (MQ=255)
        agtgatcAATTTCACAAAGTTGGGGGCACTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGTCCgg                                                                                                                                        <  1:218981/137‑1 (MQ=255)
        aGGGAGCAATTGCACAAAGTTGGGGGCACTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTATCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCgg                                                                                                                                        <  2:124813/143‑1 (MQ=255)
        aGGGAGCAATTGCACAAAGTTGGGGGCACTTTGCTGTCTACTGGGTAATTGCAGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCgg                                                                                                                                        >  2:431762/1‑143 (MQ=255)
           gAGCAATTGCACAAAGTTGGGGGCACTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCAAATGACCGGGct                                                                                                                                     <  2:308175/143‑2 (MQ=255)
           gAGCAATTGCACAAAGTTGGGGGCACTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCAAATGACCGGGct                                                                                                                                     <  1:558757/143‑2 (MQ=255)
             gCAATTGCACAAAGTTGGGGGCACTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAg                                                                                                                                   <  1:915223/143‑1 (MQ=255)
               aagtGCACAAAGTCGGGGGCACTTTGCTGGCTACTGGGTAATTGCGGTTAGTTCTGTTGTCGCTTTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGCCATTTGACCGGGCAAggg                                                                                                                                 <  2:790330/140‑1 (MQ=255)
                 ttGCACAAAGTTGGGGGCACTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGa                                                                                                                               >  1:78087/1‑143 (MQ=255)
                 ttGCACAAAGTTCGGGGCACTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGa                                                                                                                               <  1:376732/143‑1 (MQ=255)
                     acaAAGTTGGGGGCACTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTaa                                                                                                                           <  2:877075/143‑1 (MQ=255)
                      gtaaGTGGGGGGCACTTGTCTGGCTACTGGGTACTTGCGGTTCTTTCTGTTGGCGCATTATTTTTAACCGCAAGTGTGAAAGACGTTTGATGACGGGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAAt                                                                                                                          <  2:28266/141‑1 (MQ=255)
                       aactttGGGGGCCCTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAAtt                                                                                                                         <  2:649314/139‑1 (MQ=255)
                       aaaGTTGGGGGCACTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAAtt                                                                                                                         >  1:885812/1‑143 (MQ=255)
                           ttGGGGGCACTTTTCTTTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAGGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATa                                                                                                                     <  2:10963/143‑1 (MQ=255)
                                ggCACTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGc                                                                                                                >  2:237128/1‑143 (MQ=255)
                                       tgcgggcTACTGGGTAATTGCGGTTATTTCTGCGGTCGCATGAGTTTTAACCGCAAAGGGTAAAGACGTTTGATGACGTGGACGAGAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGAGTAATTCATAAACGCAGgttgt                                                                                                         <  2:175893/137‑1 (MQ=255)
                                        gCTTTCCACTGGGCAATTGCGGTTACTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGgttgtt                                                                                                        <  1:887851/143‑1 (MQ=255)
                                         cTGTCTACTCGGTAATTGCGGTTATTTCTGTTGTCCCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGttt                                                                                                       <  1:1016192/143‑1 (MQ=255)
                                          tGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTACTTCATAAACGAAGGTTGtttt                                                                                                      >  2:779389/1‑143 (MQ=255)
                                            tCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGCCGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATCAACGCAGGTTGTTTTGc                                                                                                    >  1:1025013/1‑143 (MQ=255)
                                               aCTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGACTAATTCATAAACGCAGGCTGTTTTGCTTc                                                                                                 >  2:512046/1‑143 (MQ=255)
                                                     tAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGc                                                                                           <  1:556426/143‑1 (MQ=255)
                                                          gcgcTTATTTCTGTTGTCGCATTATGTTTAACCGCAACGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCaa                                                                                      <  1:30276/143‑1 (MQ=255)
                                                          gCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCaa                                                                                      <  1:285072/143‑1 (MQ=255)
                                                           tgtttATTGCCGTTGTCGCATTATGTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCCGAATGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAAt                                                                                     <  2:399915/140‑1 (MQ=255)
                                                           cGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAAt                                                                                     >  1:603540/1‑143 (MQ=255)
                                                            ggTTATTTCTGTTGTCGCATTATTTGTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATg                                                                                    <  1:290415/143‑1 (MQ=255)
                                                                   tCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCCTAAGCGGCAATGGcgtcgt                                                                             >  2:1048162/1‑143 (MQ=255)
                                                                    cTGTTGTCGTATTATTTTTAACCGCAAAGGTTAAAGACGTGTTATGACGTGGACGATAGCGTAAAGCCCGGTCGTTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATGGcgtcgtc                                                                            <  2:694041/143‑1 (MQ=255)
                                                                        tgtCGCATGTGTGTTAACCGCACAGGTTGAAGACGTTTGAGGACGTGGACGATATCGGAAAGCGCGGGCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATGGCGTCGTCGtgc                                                                        <  2:342166/143‑1 (MQ=255)
                                                                            gCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCACGGGGCTCACTTCATAAACGCAGGTTGTTTTGCTTCATACGCGGCAATCGCGCCGTCGTCCTCCa                                                                    >  1:951497/1‑143 (MQ=255)
                                                                            gCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCGTACGCGGCAATGGCGTCGTCGTGCTGCa                                                                    >  1:585332/1‑143 (MQ=255)
                                                                              attattTTTAACCGGAAAGGTTAAAGACGTTTGATGACGTGGACGAGAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATGGCGTCGTCGTGCTGCAAg                                                                  <  2:467226/143‑1 (MQ=255)
                                                                              attattTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATGGCGCCGTCGTGCTGCCAg                                                                  >  2:439745/1‑143 (MQ=255)
                                                                                    tttAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGAGTAAGTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATGGCGCCGGCGTGCGGGCAGGTAGGc                                                            >  2:914042/1‑143 (MQ=255)
                                                                                            cAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCCTAAACGCAGGTTGTTTTGCTTCATAAGCGCCAATGGAGTCGTGGTGCTGCAAGCTAAGCCCAATACt                                                    >  1:916784/1‑143 (MQ=255)
                                                                                               aGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATTGCGTCGTCGTGCTGCAAGGTAAGCCCAATACTGTc                                                 <  1:272545/143‑1 (MQ=255)
                                                                                                    aaaGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATGGCGTCGTCGTGCTGCAAGGTAAGCCCAATACTGTCCCGAc                                            >  2:651929/1‑143 (MQ=255)
                                                                                                        aCGTTTGATGGCGTGGACGATAGCGGATAGCCCGCTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATGGCGTCGTCGTGCTGCAAGGTAAGCCCAATACTGTCCAGACCGtt                                        <  2:506291/143‑1 (MQ=255)
                                                                                                        aCGTTTGATGACGTGGACGATAGCGGAAATCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATGGCGTCGTCGTGCTGCAAGGTAAGCCCAATACTGTCCAGAcccgt                                        >  2:130933/1‑140 (MQ=255)
                                                                                                            ttGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATGGCGTCGTCGTGCTGCAAGGTAAGCCCAATACTGTCCAGACCGTtcatc                                    <  1:384379/143‑1 (MQ=255)
                                                                                                            ttGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCGTCATAAGCGGCAATGGCGTCGTCGTGCTGCAAGGTAAGCCCAATACTGTCCAGACCGTtcatc                                    <  2:202571/143‑1 (MQ=255)
                                                                                                                 gaCGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGTGAAGGTGATTATTTCATAAACGCAGGTTGTTGGGCTTCAAAAGCGGCAATGGCGTCGTCGTGCTGCAAGGTAAGCCCAATACTGTCCAGACCGTTCATCATGCa                               <  1:846039/143‑1 (MQ=255)
                                                                                                                  aCGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAGGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATGGCGTCGTCGTGCTGCAAGGTAAGCCCAATACTGTCCAGACCGTTCATCATGCAg                              <  1:16589/143‑1 (MQ=255)
                                                                                                                   cGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATGGCGTCGTCGTGCTGCAAGGTAAGCCCAATACTGTCCAGACCGTTCATCATGCAGt                             >  1:655612/1‑143 (MQ=255)
                                                                                                                    gTGGACGAGAGCGGAAAGCCCGCTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATGGCGTCGTCGTGCTGCAAGGTAAGCCCAATACTGTCCAGACTGTTCATCATGCAGTg                            <  2:887065/143‑1 (MQ=255)
                                                                                                                     tGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATGGCGTCGTCGTGCTGCAAGGTAAGCCCAATACTGTCCAGACCGTTCATCATGCAGTgg                           >  1:665064/1‑143 (MQ=255)
                                                                                                                       gACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATGGCGTCGTCGTGCTGCAAGGTAAGCCCAATACTGTCCAAACCGTTCATCATGCAGTggcc                         >  2:142277/1‑142 (MQ=255)
                                                                                                                         cGAGAGCGGAAAGCCCGGGCATTTGACCGGGCAAGGGGATTAATTCATAAACGCGGGTTGTTTTTCTTCATAAGCGGCAATGGCGTCGTCGTGCTGCAAGGTAAGCCCAATACTGTCCAGACCGTTCATCATGCAGTggcggc                       <  1:241640/143‑1 (MQ=255)
                                                                                                                               ccccttgCCCGGTCAAATGGCCGGGCAAGGGGATTAATTCATTCGTTTAGGTGGTTTTGCTTCATAAGAGGCAATGGCGTCGTGGTGCTGCAGGGTAAGCCCCATACGGTGCAGATCGTTCCTCCTGCAGTGGCGGCGGAggg                 >  2:322090/7‑143 (MQ=255)
                                                                                                                               cGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATCAGCGGCAATGTCGTCGTCGTGCTGCAAGGTAAGCCCAATACTGTCCAGACCGGTCATCATGCAGTGGCGGCGGAAgg                 >  1:604584/1‑143 (MQ=255)
                                                                                                                                 gAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATGAACGCAGGTTGTTTTGCTTCATAAGCGGCAATGGCGTCGTCGTGCTGCAAGGTAAGCCCAATACTGTCCAGACCGTTCGTCAGGCAGTGGCGGCGGAGGGCa               >  1:399991/1‑143 (MQ=255)
                                                                                                                                       gcGGTCATGTGACGTGGCAAGTGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATGGCGTCGTCGTGCTGCAAGGTAAGCCCAATACTGTCCAGACCGTTCATCATGCAGTGGCGGCGGAAGGCATCGATg         <  2:615125/142‑1 (MQ=255)
                                                                                                                                        cGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATGGTGTCGTCGTGCTGCAAGGTAAGCCCAATACTGTCCCGTGTTCTCATGTTGCAGTGGCGGCGGAAGGCATCGATgg        >  2:216729/1‑143 (MQ=255)
                                                                                                                                              tttGACCGGGCAAGGGGATTAATTCATAACCGCAGGTTGTTTTGATTCCTATGCGGCAATGGAGACATTGTACTGTTAGATAAGTGCTGAACTTTCCAGACCGTTCATCATGATTTGGCGTCGGAAGGCATCGATGGTAAAGc  <  2:1025013/143‑1 (MQ=255)
                                                                                                                                              tttGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATGGCGTCGTCGTGCTGCGAGGTAAGCCCAATACTGTCCCGACCGTTCATCATGCAGCGGCGGCGGAAGGCATCGATGGTAAGGc  >  2:128373/1‑143 (MQ=255)
                                                                                                                                              |                                                                                                                                              
CGTTATTCAGGGAGCAATTGCACAAAGTTGGGGGCACTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGATGACGTGGACGATAGCGGAAAGCCCGGTCATTTGACCGGGCAAGGGGATTAATTCATAAACGCAGGTTGTTTTGCTTCATAAGCGGCAATGGCGTCGTCGTGCTGCAAGGTAAGCCCAATACTGTCCAGACCGTTCATCATGCAGTGGCGGCGGAAGGCATCGATGGTAAAGC  >  NC_000913/78688‑78972

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: