Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,865,682 G→C 5.4% intergenic (‑46/+44) yeaE ← / ← mipA methylglyoxal reductase YeaE/scaffolding protein that interacts with murein polymerase and murein hydrolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,865,6820GC 5.4% 201.1 / 4.4 75intergenic (‑46/+44)yeaE/mipAmethylglyoxal reductase YeaE/scaffolding protein that interacts with murein polymerase and murein hydrolase
Reads supporting (aligned to +/- strand):  ref base G (41/30);  new base C (2/2);  total (43/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.15e-01

TTTGCGCTGACTGGCATCTTCGCCCATATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGTGC  >  NC_000913/1865541‑1865824
                                                                                                                                             |                                                                                                                                              
tttGCGCTGACTGGCATCTTCGCCCATATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAACCAGGGCGTGa                                                                                                                                               >  1:969160/1‑143 (MQ=255)
    cgcTGGCTGGGACCGTCGCCCATATACCATGTGCTCTGCCCTACGGCTGGCAGTGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGcc                                                                                                                                           <  2:250707/143‑1 (MQ=255)
       tGACTGGCATCTTCGCCCATATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGACATCGCCACTAAATTGCATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCCCCACCGTAATGCAAAACAGGGCGTGACGCCCTg                                                                                                                                        >  2:366156/1‑143 (MQ=255)
       tGACTGGCATCTTCGCCCATATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGACATCGCCACTAAATTGAATCATGTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTg                                                                                                                                        >  1:823191/1‑143 (MQ=255)
        gACTGGCATCTTCGCCCATATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTCTTGCCCCACCGTAATGCAAAACAGGGCGTGACGCCCTGt                                                                                                                                       <  1:1002888/143‑1 (MQ=255)
         aCTGGCATCTTCGCCCATATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGtt                                                                                                                                      >  2:438750/1‑143 (MQ=255)
         aCTGCCATCTGCGCCCATATACCATGTTCCCTGCGCTACGGCTGGCAGTGAGAGATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGtt                                                                                                                                      <  2:205245/143‑1 (MQ=255)
          ttGGCATCTTCGGGCCTATACCATGTTCCTTGCCCTACGGCTGGCAGTGAGACATCGCCACTAAATTGTATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTCACGCCCTGttt                                                                                                                                     <  1:343682/142‑1 (MQ=255)
             gcatgcccGCCCAGATGCCATGTTCCCTGCCCTACGGCTGGCAGTGAGACATCGCCTCTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTa                                                                                                                                  <  2:560635/136‑1 (MQ=255)
             gCATCTTCGCCCATATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTCACGCCCTGttttgc                                                                                                                                  <  1:757591/143‑3 (MQ=255)
                 cTTCGCCCATATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTCTATGca                                                                                                                              >  2:730559/1‑143 (MQ=255)
                   tCGCCCATATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGcaca                                                                                                                            >  2:334134/1‑143 (MQ=255)
                       ccATATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACACAAt                                                                                                                        >  2:1036139/1‑143 (MQ=255)
                               cATGTTCCCTGCCCTACGGCTGGCAGTGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTCATGCCAACCACGCCGTGACGCCCGGTTTTCATGCACAACATGCCCTgta                                                                                                                >  2:601802/1‑141 (MQ=255)
                               cATGTTCCCTGCCCTACGGCTGGCAGTGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGa                                                                                                                >  1:429125/1‑143 (MQ=255)
                               cATGTTCCCTGCCCTACGGCTGGCAGTGAGACATCGCCACTAAATTGAATCATTTTGTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCACAACAGGGCGCGACGCCCTGACTGCATGCACACAATCCCCTGGa                                                                                                                >  2:30030/1‑143 (MQ=255)
                                   ttCCCTGCCCTACGGCTGGCAGTGAGACATCGCCACTAAATTGCATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGCCGTGACGCCCTTTTTTTATGCACACAATGCACTgggcaga                                                                                                            >  2:100961/1‑138 (MQ=255)
                                     cccTGCCCTACGGCTGGCAGTGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGCCGGCCTGTTTTTTTGCACAAACTGCCCTgggtagaga                                                                                                          >  2:738128/1‑136 (MQ=255)
                                      ccTGCCCTACGGCTGGCAGTGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAACCAGGGGGTGACGCCCTGTTTTTCGGCACAAAATGCCCGGGGAAGATGc                                                                                                         >  2:345671/1‑143 (MQ=255)
                                            cTACGGCTGGCAGTGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGATAGATGCATTATc                                                                                                   >  2:306457/1‑143 (MQ=255)
                                            cTACGGCTGGCAGTGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATc                                                                                                   >  1:756213/1‑143 (MQ=255)
                                               cGGCTGGCAGTGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACATGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGa                                                                                                <  1:110928/143‑1 (MQ=255)
                                                     gCATTGAGACATCGCCACTAAATTGAATCATGTTTTGTTGCATTGTTGCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGt                                                                                          <  2:936383/143‑1 (MQ=255)
                                                     gCAGTGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTAGGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGt                                                                                          >  2:209969/1‑143 (MQ=255)
                                                      ccgTGAGACATCGCCCCTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTa                                                                                         <  1:63039/141‑1 (MQ=255)
                                                      cAGTGAGACATCGCCACTAGATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTGTTATGCACAAAATGCCCTGGAAAGATGCCTTCTCACAATTTGtt                                                                                         <  2:754763/143‑2 (MQ=255)
                                                       gttGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAg                                                                                        <  2:848616/141‑1 (MQ=255)
                                                       aGTGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAg                                                                                        >  1:184477/1‑143 (MQ=255)
                                                        gTGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAgg                                                                                       >  2:728343/1‑143 (MQ=255)
                                                         tGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCCCCGTCATGCAAAACAGGGCGTGACGCCCTGTTTCTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGt                                                                                      >  1:517435/1‑143 (MQ=255)
                                                             aCATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTTTTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGCATTTGTAGGTGATc                                                                                  >  2:336723/1‑143 (MQ=255)
                                                             aCATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCACTGGCAAGATGCATCATACGCATTTGTAGGTGaga                                                                                  >  2:685294/1‑141 (MQ=255)
                                                                 cGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCgg                                                                              <  1:392881/143‑1 (MQ=255)
                                                                  gCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGTGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCGCGGt                                                                             >  1:1051907/1‑143 (MQ=255)
                                                                   ccACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTa                                                                            <  1:684578/143‑1 (MQ=255)
                                                                    ctcTACATTTAATCCTCTTTTGTTTCATTGTGTGCTCCCAGGTCTTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACACAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAg                                                                           <  2:434121/141‑1 (MQ=255)
                                                                    cACTAAATTGAATCCTTCTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAg                                                                           <  2:614745/143‑1 (MQ=255)
                                                                    cACTAAATTGAATCATTTTTTTTTTTTTTTTTTCCTCCCAGGTGTTGTACCATCTTAATGCTTTTCAGGGCGTGTCGCCCTGTTTTTTTGCACAACTTCCCCTGGAAAGATCCCTTATCTGAATTTGTTTGTGATccctggag                                                                           >  2:399974/1‑138 (MQ=255)
                                                                          aTTGAATCATTTTTTGTTGCATCGTTTCCTCCCAGGTGTTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCa                                                                     <  2:39936/143‑1 (MQ=255)
                                                                             gAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGc                                                                  <  1:801586/143‑1 (MQ=255)
                                                                                  aTTTTTTGTTGCATTGTCTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAACGATGCCTTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTc                                                             <  1:778553/143‑1 (MQ=255)
                                                                                  aTTTTTTGCTGCATGGTTCCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTCATGCACAAAATGCCCTGGAAAGATGCATTATAAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTc                                                             <  1:100961/143‑1 (MQ=255)
                                                                                   ttttttGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGTGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTcc                                                            >  1:126968/1‑143 (MQ=255)
                                                                                   ttttttGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAACATCCCCTGGAAAGATGCATTATCAGAATTAGTAGGTGATCCCGGTAGAAATAAGGCCAGTcc                                                            >  1:861149/1‑143 (MQ=255)
                                                                                   ttttttGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTcc                                                            >  1:644351/1‑143 (MQ=255)
                                                                                     ttttGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAg                                                          <  1:199184/143‑1 (MQ=255)
                                                                                         gttgCATTGTTTCGTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGAtt                                                      <  2:897260/143‑1 (MQ=255)
                                                                                                 gTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATccacc                                              >  1:806526/1‑143 (MQ=255)
                                                                                                       tccCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCggg                                        <  1:366156/143‑1 (MQ=255)
                                                                                                       tccCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTGTTATGCACAAAATGCCCTGGATAGATGCATTATCAGAATTTGTAGGTGATGCCGGTAGAACTCAGGCCGATCCAGGATTTATCCACCATCggg                                        >  1:130769/1‑143 (MQ=255)
                                                                                                         ccAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCt                                      >  1:1025155/1‑143 (MQ=255)
                                                                                                         ccAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCt                                      <  1:5835/143‑1 (MQ=255)
                                                                                                           aGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGt                                    >  1:542676/1‑143 (MQ=255)
                                                                                                             gttgtGCACCCCCGTAATGCAAAACAGTGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCa                                  <  2:64584/139‑1 (MQ=255)
                                                                                                             gTATTGCACCACCGTAATGCAAAACGGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCa                                  <  2:606409/143‑1 (MQ=255)
                                                                                                             gTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCCGAATAAACGCACAAAATGCCATAGAAAGATGCATTAACAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCa                                  >  1:468934/1‑143 (MQ=255)
                                                                                                             gTATTGAAACACCATAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCa                                  <  1:931749/143‑1 (MQ=255)
                                                                                                              tATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAg                                 >  2:131399/1‑143 (MQ=255)
                                                                                                                 tGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTaa                              <  1:306457/143‑1 (MQ=255)
                                                                                                                   caccacCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGACCAGGATCTATCCACCAGCGGGCTGTCAGTAAcg                            >  2:614549/1‑142 (MQ=255)
                                                                                                                   caccacCGTAATGCAAAACAGGGCGTGACGCCCTGTTGTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATATATCCACCATCGCGCTGTCAGTAACt                            >  2:334459/1‑143 (MQ=255)
                                                                                                                    accaccGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACtt                           >  1:109752/1‑143 (MQ=255)
                                                                                                                       accGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTtcat                        >  1:724207/1‑143 (MQ=255)
                                                                                                                       accGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTtcat                        <  1:728343/143‑1 (MQ=255)
                                                                                                                        ccGTAATGAAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGCGATCCCGGTAGAAACCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTtcatc                       <  2:599452/143‑1 (MQ=255)
                                                                                                                         cGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTtcatca                      <  2:290140/143‑1 (MQ=255)
                                                                                                                                cAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCagacagac               <  2:84033/143‑1 (MQ=255)
                                                                                                                                 aaaaCAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACg              >  2:985170/1‑143 (MQ=255)
                                                                                                                                 aaaaCAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACg              >  1:313726/1‑143 (MQ=255)
                                                                                                                                 aaaaCAGGGCGTCACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACg              >  1:730938/1‑143 (MQ=255)
                                                                                                                                  acaCAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACgg             <  1:898738/141‑1 (MQ=255)
                                                                                                                                   aaCAGGGCGTCACGCCCTGTTTTTATGCACAAAATGCCCTGGAACGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGACATCAGGCCAGTCCAGGATTTATCCACCACCGGGCTGTCGGTAACTTCATCAGACAGACggg            >  2:466235/1‑143 (MQ=255)
                                                                                                                                    aCAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGACAGATGCATTCTCAGAATTTGTAGGTGATCCCGGTAGAAATCACGCCAGTCCAGGACTTATCCACCACAGGGCTGTCAGTAAATCCATCAGACACACGGgt           >  2:1050602/1‑143 (MQ=255)
                                                                                                                                        ggCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCAGCAGACAGACGGgcgtcg       >  2:927394/1‑141 (MQ=255)
                                                                                                                                         gCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCACCAGACAGACGGGTGTAGc      >  2:798227/1‑143 (MQ=255)
                                                                                                                                             gACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGGGc  >  2:724867/1‑143 (MQ=255)
                                                                                                                                             gACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGAAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGTGc  >  2:693500/1‑143 (MQ=255)
                                                                                                                                             |                                                                                                                                              
TTTGCGCTGACTGGCATCTTCGCCCATATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGACATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGTGC  >  NC_000913/1865541‑1865824

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: