Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,373,177 G→A 7.7% G96S (GGC→AGC)  arnF → undecaprenyl‑phosphate‑alpha‑L‑Ara4N flippase ‑ ArnF subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,373,1770GA 7.7% 164.2 / 5.3 66G96S (GGC→AGC) arnFundecaprenyl‑phosphate‑alpha‑L‑Ara4N flippase ‑ ArnF subunit
Reads supporting (aligned to +/- strand):  ref base G (25/35);  new base A (3/2);  total (28/38)
Fisher's exact test for biased strand distribution p-value = 6.44e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.59e-01

CTGTTACTCGGGCTGCTGGGTTATCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTACTGAGTTTTCCCTGCCACTTTACACTGCCGTTCCCACTCATCGG  >  NC_000913/2373039‑2373318
                                                                                                                                          |                                                                                                                                             
cTGTTATTCGGGCTGCTGGGTTATCTGCTTTGCTTTTTTTTTTGGTATAAAACGCTTCATGAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTg                                                                                                                                           <  2:462237/143‑1 (MQ=255)
cTGTTACTCGGGCTGCTGGGTTATCTGCTTTCCGTTTTTTGTTGGTATATAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCGTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTg                                                                                                                                           <  2:210328/143‑1 (MQ=255)
cTGTTACTCGGGCTGCTGGGTTATCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGTCTTGCTCAGTATGAGTTCTGTGCTGGTCTGGATTGGTTAACTGGTACTTCACGGccg                                                                                                                                           >  2:600990/1‑141 (MQ=255)
cTGTTACTCGGGCCGCTGGGTTATCTCCTTTCCGTTTTTTGTTCGTATAAATCTCTTCATAATCTTGCTCTAAGCAAAGCCTATGCCTTGCCCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTg                                                                                                                                           <  1:291450/143‑1 (MQ=255)
  gTTACTCGGGCTGCTGGGTTATCTGCTTTCCGTTTTTTGTTGGTCTCAAACGCTTCATAAACTTGCGCTAATCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGAATTGCTTCATTGGTACTTCCCGGCTggg                                                                                                                                         >  2:471282/1‑143 (MQ=255)
            ctgctgGGTTATCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGGTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCAGCCGGGAAgtaccatt                                                                                                                               <  1:1012245/143‑8 (MQ=255)
                tgGGTTATCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCg                                                                                                                           <  1:178479/143‑1 (MQ=255)
                tgGGTTATCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCg                                                                                                                           >  2:220336/1‑143 (MQ=255)
                 ggtttATCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTTCATAATCTTGCGCTATGCAACGCCTATGCCGTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGc                                                                                                                          <  2:309924/140‑1 (MQ=255)
                  ggTTATCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCt                                                                                                                         <  2:379893/143‑1 (MQ=255)
                    ttATCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAATGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTACCGTCTGGGAAGGTACTTTTTCGCTGa                                                                                                                       >  2:996225/1‑143 (MQ=255)
                    ttATCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGAAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGATGGTATGGATTGCTTCCATCGTACTTCCCGGCTGGGAAGGGACTTTTTCGCGGa                                                                                                                       >  1:636878/1‑143 (MQ=255)
                     tATCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGaa                                                                                                                      <  1:579911/143‑1 (MQ=255)
                      aTCTTCTTTCCGTCTCTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATTAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGaaa                                                                                                                     <  1:21033/143‑1 (MQ=255)
                      aTCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGaaa                                                                                                                     <  1:824194/143‑1 (MQ=255)
                      aTCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGaaa                                                                                                                     <  1:547934/143‑1 (MQ=255)
                      aTCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCAGGCTGGGGAGGGGCTTTGTCGCTGaaa                                                                                                                     >  1:227401/1‑143 (MQ=255)
                       tCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCTGCTGGGAAGGGACTTTTTCGCTGAAAg                                                                                                                    <  1:294392/143‑1 (MQ=255)
                       tCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAg                                                                                                                    <  1:50194/143‑1 (MQ=255)
                       tCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTCGGAAGGGACTTTTTCGCTGAAAg                                                                                                                    >  1:167733/1‑143 (MQ=255)
                            tttCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGCGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGCCTTTTTCGCTGAACGCccta                                                                                                               >  1:225192/1‑143 (MQ=255)
                             ttCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCactac                                                                                                              >  2:586772/1‑143 (MQ=255)
                              tCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCCATGGTACTATTTGGTTGTCAAGGGACTTTTTCGCTGAAAGCactact                                                                                                             <  1:1002194/143‑1 (MQ=255)
                                cGTTTTTGCTTGCTATCAAACGCTTCCTAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTgg                                                                                                           <  1:113985/143‑1 (MQ=255)
                                cGTTGTTTGTTGGTATAGACCGCGTCATACCCCTGCGCTAAGCAACGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTgg                                                                                                           <  1:313831/143‑1 (MQ=255)
                                    ttttGTGGTATTCAACGCCTCATAAACTTGCGCTCAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTa                                                                                                      <  2:647324/143‑1 (MQ=255)
                                      tcgttgGTATAGAACGCTGCACACACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGCTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGCCTTTTTCGCTGAAAGCACTACTGGGAGTAg                                                                                                     <  2:572915/141‑1 (MQ=255)
                                       tgttgGTATAAAACGCTTCATCAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGc                                                                                                    <  1:637654/143‑1 (MQ=255)
                                        gttgGTATAAAGCGCTTCATAGACGTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGcc                                                                                                   <  2:585734/143‑1 (MQ=255)
                                         ttgGTATAACACGCTTCATTAGCCTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCGGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCt                                                                                                  <  2:262861/143‑1 (MQ=255)
                                                 aaaCGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCTATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATg                                                                                          >  2:579164/1‑143 (MQ=255)
                                                    cGCTTGATAAAGTTGCGCGAGGCAATGCCTATGCCTTGGTCAGTATGAGTGATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTAGTATGAGc                                                                                       <  2:235475/143‑1 (MQ=255)
                                                        tCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGt                                                                                   <  1:294297/143‑1 (MQ=255)
                                                                 tGCGCTGAGCAAAGCCTATGCCTTGCTCAGTATGAGCTATGTGCTGGTGTGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGACAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGa                                                                          <  2:427847/143‑1 (MQ=255)
                                                                    gcTGAGGAAAGCCTATGCCTGGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGAttt                                                                       <  2:406357/143‑1 (MQ=255)
                                                                        aGCAAACCCTATGCCTTGCTCCGTATGCTGTATGTGCTGGTATTGATTGCTTCAATGGTACTTCCCGGCTGGGAACTGACTTTTTCGCTCAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCt                                                                   <  1:15447/143‑1 (MQ=255)
                                                                                cTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGa                                                           <  1:342741/143‑1 (MQ=255)
                                                                                      cTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAGaac                                                     >  1:431090/1‑143 (MQ=255)
                                                                                         tcTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCTATGGTACGTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAaacaac                                                  <  2:766517/142‑1 (MQ=255)
                                                                                         gCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAaacaac                                                  <  1:220336/143‑1 (MQ=255)
                                                                                             aGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTa                                              >  2:268003/1‑143 (MQ=255)
                                                                                             aGTATGAGTGATGTGCTGGTACGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAACGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTa                                              <  2:731649/143‑1 (MQ=255)
                                                                                                aTGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTACTg                                           >  2:579333/1‑143 (MQ=255)
                                                                                                     ttATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGCGCGGGTCGATGCTGATTCTCCTGACCACGACCGAACAACGGTACTGAGttc                                      >  2:1043083/1‑142 (MQ=255)
                                                                                                        tgtgCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTAATTGGAGTAGCCTGCCATATCGTCTTGTTGATGCTGATTTGCCTGCCCACGACAAAACAACGTTACTGAGTTTTcc                                   <  2:469262/143‑1 (MQ=255)
                                                                                                         gtgCTGGTATGGCTTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTACTGAGTTTTccc                                  <  1:100217/143‑1 (MQ=255)
                                                                                                         gtgCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTACTGAGGTTTccc                                  >  2:439906/1‑143 (MQ=255)
                                                                                                               gTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTACTGAGTTTTCCCTGCCAc                            >  2:770044/1‑143 (MQ=255)
                                                                                                                    gATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTACTGAGTTTTCCCTGCCACTTTac                       <  1:586772/143‑1 (MQ=255)
                                                                                                                          ttCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGACAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTACTGAGTTTTCACTGCCCCTTTACACTccc                 >  2:1029552/1‑143 (MQ=255)
                                                                                                                          ttCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAGAACAACGTTACTGAGTTTTCCCTGCCGCTTTACACTGcc                 >  1:333053/1‑143 (MQ=255)
                                                                                                                          ttCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCCGCCCACGACAAAACAACGTTACTGAGTTTTCCCTGCCACTTTACACTGcc                 >  1:717163/1‑143 (MQ=255)
                                                                                                                             aaTGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCCATACAAAGTTTGGCCTGTATTATGAGCGGCTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTACTGAGTTTTCCCTGCCACTTTACACTGCCGtt              <  1:718123/143‑1 (MQ=255)
                                                                                                                              ctGGTACTGCCCGGCTGGGAAGGGACGTTTTCGCTGAAAGCACTGCTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTACTGAGTTTTCCCTGCCACTTTACACTGCCGTTc             <  2:924479/142‑1 (MQ=255)
                                                                                                                              aTGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTACTGAGTTTTCCCTGCCACTTTACACTGCCGTTc             <  1:268003/143‑1 (MQ=255)
                                                                                                                               agtcccTTCCCAGCCGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTACTGAGTTTTCCCTGCCACTTTACACTGCCGTTcc            >  1:945266/6‑143 (MQ=255)
                                                                                                                                 tcccTTCCCAGCCGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCAGTATTCTGAGCGGGCAGATGCTGATTTTCCTGCCCACGACAAAACAACGTTACTGAGTTTTCCCTGCCACTTTACACTGCCGTTCCCa          >  1:663606/4‑143 (MQ=255)
                                                                                                                                 gcaCTGCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTACTGAGTTTTCCCTGCCACTTTACACTGCCGTTCCCa          <  1:471282/141‑1 (MQ=255)
                                                                                                                                 gTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGCGTAGCCTGTATTATGAGCGGGTTGATGCTGAGTTTCCTGCCCACGACCAAACAACGTTCCGGAGCTTTCCCTGCCACTCTACACGGCCGTTCCCa          >  2:37545/1‑143 (MQ=255)
                                                                                                                                  cccTTCCCAGCCGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGAttt                                                                       >  2:273428/3‑81 (MQ=255)
                                                                                                                                  cccTTCCCAGCCGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGAttt                                                                       <  1:273428/79‑1 (MQ=255)
                                                                                                                                    cTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTACTGAGTTTTCCCTGCCACTTTACACTGCCGTTCCCACTc       >  1:518651/1‑143 (MQ=255)
                                                                                                                                     ttCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTACTGAGTTTTCCCTGCCACTTTACACTGCCGTTCCCACTCa      >  2:96861/1‑143 (MQ=255)
                                                                                                                                     ttCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTACTGAGTTTTCCCTGCACCTTTAGACTGCGGTTCCCAGTCa      >  1:121816/1‑143 (MQ=255)
                                                                                                                                        ccGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTAACTGAGTTTTCCCTGCCACTTTACACTGCCGTTCCCACTCATCg   >  1:893267/1‑143 (MQ=255)
                                                                                                                                         cGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGACAGTGCTGATTTTCCTGCCCACGACAAAACAACGTTACTGAGTTTTCCCTGCCACTTTACACTGCCGTTCCCACTCACCgg  >  1:149266/1‑143 (MQ=255)
                                                                                                                                          |                                                                                                                                             
CTGTTACTCGGGCTGCTGGGTTATCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTACTGAGTTTTCCCTGCCACTTTACACTGCCGTTCCCACTCATCGG  >  NC_000913/2373039‑2373318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: