Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,520,504:1 +T 12.3% intergenic (‑180/+167) yjhU ← / ← yjhF KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator YjhU/KpLE2 phage‑like element; putative transporter YjhF

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,520,5041.T12.3% 210.9 / 28.6 65intergenic (‑180/+167)yjhU/yjhFKpLE2 phage‑like element; putative DNA‑binding transcriptional regulator YjhU/KpLE2 phage‑like element; putative transporter YjhF
Reads supporting (aligned to +/- strand):  ref base . (29/28);  new base T (4/4);  total (33/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.14e-01

AACCCTGTTTACCCGGAGAGTTGATGCAGATTGCCAGTGGCATGATTTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAAC  >  NC_000913/4520364‑4520644
                                                                                                                                             |                                                                                                                                            
aaCCCTGTTTACCCGGAGAGTTGATGCAGATTGCCAGTGGCATGATTTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCt                                                                                                                                            >  2:699624/1‑143 (MQ=255)
    cTGTTTACCCGGAGAGTTGATGCAGATTGCCAGTGGCATGATTTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCgg                                                                                                                                        >  2:748728/1‑143 (MQ=255)
     ggTTTACCCGGAGAGTTGATGCAGATTGCCAGTGGCATGATTTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCACTGTTCCCCCATACTGTAAAGCCGGAGCATGTCTCCGGc                                                                                                                                       <  2:317880/142‑1 (MQ=255)
       tttACCCGGAGAGTTGATGCAGATTGCCAGTGGCATGATTTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCtt                                                                                                                                     >  1:770756/1‑143 (MQ=255)
       tttACCCGGAGAGTTGATGCAGATTGCCAGTGGCATGATTTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGCATGTCTCCGGCtt                                                                                                                                     <  2:240047/143‑1 (MQ=255)
       tgtaaccGGCGAGTGGATGCAGATGGGCAGTGGCATGATTTTATACAGAGATTTTATTCTTTTACATGAAATAAACCAGTATACTATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGCATGTCTCCGGCtt                                                                                                                                     <  1:1012789/138‑1 (MQ=255)
           cctggAGAGTTGATGCAGTTTGCCAGTGGCATGATTTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGCATGTCTCCGGCTTTACa                                                                                                                                 <  1:340474/140‑1 (MQ=39)
           cccGGAGAGTTGATGCAGATTGCCAGTGGCATGATTTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACa                                                                                                                                 <  1:377990/143‑1 (MQ=255)
             cGGAGAGTTGATGCAGATTGCCAGTGGCATGATTTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGt                                                                                                                               >  2:317510/1‑143 (MQ=255)
              ggAGAGTTGATGCAGATTGCCAGTGGCATGATTTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAGACTCGGGCATTACAGTa                                                                                                                              >  2:57757/1‑143 (MQ=255)
                     tGATGCAGATTGCCAGTGGCATGATTTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTga                                                                                                                       <  1:321333/143‑1 (MQ=255)
                        tGCAGATTGCCAGTGGCATGATTTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGaa                                                                                                                    <  2:724789/143‑1 (MQ=255)
                        tGCACATTGCCAGTCGCATGATGTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGaa                                                                                                                    <  1:246404/143‑1 (MQ=255)
                                   aGTGGCATGATTTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCACCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCa                                                                                                         >  1:558865/1‑143 (MQ=255)
                                    gTGGCATGATTTTATACAGATATTTTATTCTTTTACATGAGATAAACCAGCATACCAGTGGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCaa                                                                                                        <  2:110163/143‑1 (MQ=255)
                                      ggCATGATTTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGGTCTCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGc                                                                                                      <  2:834343/143‑1 (MQ=255)
                                         aTGATTTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTCTACAGTATTACTGAGAATACACCCATCAAGCCTa                                                                                                   >  2:328178/1‑143 (MQ=255)
                                           gATTTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAAt                                                                                                 >  1:873372/1‑143 (MQ=255)
                                              tttATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGa                                                                                              <  1:488984/143‑1 (MQ=255)
                                               ttATACAGATATTTCAGTCTTTTACGTGAAATAAACCAGCATACCATTTGCGCGATCGCCCGCTGTTCCCCCAGACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGaa                                                                                             <  2:589981/143‑1 (MQ=255)
                                                       atatTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGATGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAat                                                                                     >  2:635872/1‑143 (MQ=255)
                                                            ttATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCCTACTGTAAAACCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCCTCAACCATAATCGACGGGGCAAGATCGc                                                                                >  2:799567/1‑143 (MQ=255)
                                                             tATTGTTTTACATGAAATAAACCAGCATACCATGTGAGCGATCGCCCGCTGGTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGcc                                                                               <  1:455038/143‑1 (MQ=255)
                                                                tCTTTTACGTGAAATAATCCAGCATACCATTTGAGCGATCGCCCGCAGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCt                                                                            <  2:191200/143‑1 (MQ=255)
                                                                 cTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCACGCATCATCGACGGGTCACTATCGccccgt                                                                           >  1:1055289/1‑141 (MQ=255)
                                                                  ttttACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCTCATACTGTAAAGCCGGAGACATGCTCCGGCTCTACAGTATTACTGCGAAGACACCCATCAAGCCTAATCGAAGGTTCAATATCGcgccgtc                                                                          >  2:582809/1‑140 (MQ=255)
                                                                  ttttACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCGTAATCGAACGTTCAATATCGCCCCttt                                                                          >  1:125033/1‑143 (MQ=255)
                                                                  ttttACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCttt                                                                          >  1:957995/1‑143 (MQ=255)
                                                                  ttttACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACACATCAAGCATAATCGAAGTTTCAATATCGCCCCttt                                                                          >  1:654359/1‑143 (MQ=255)
                                                                   tttACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCtttt                                                                         <  1:699624/143‑1 (MQ=255)
                                                                     tACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTg                                                                       <  1:317510/143‑1 (MQ=255)
                                                                      aCATGTAATAAACCAGCATCCCATTTGGGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGa                                                                      <  2:42959/143‑1 (MQ=255)
                                                                       caggAAATAAACCAGCATACCATTTGCGCGATCGACCGCAGAGCACCCAGACTGTAAAGCCTGAGACATGCTCCGGCTTTACAGTATTACTGAGTATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGAt                                                                     <  2:780424/140‑1 (MQ=255)
                                                                       cATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGAt                                                                     <  1:173043/143‑1 (MQ=255)
                                                                        aTGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATc                                                                    <  1:424053/143‑1 (MQ=255)
                                                                        aTGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATAACTTGCCTTTGTGATc                                                                    >  1:684661/1‑143 (MQ=255)
                                                                        aTGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTACCCCATACTGTAAAACCGGAGACATGCTCCGGCTTTACAGTATCACTCAGAATACACCCAGCAAGCATAATCGACGGTTCAATATAAACCCTTTTTGATc                                                                    >  2:590245/1‑143 (MQ=255)
                                                                         tGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATACTCCGGATTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTGAATATAGCCCCTATATGATCg                                                                   >  1:385639/1‑143 (MQ=255)
                                                                          gAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGc                                                                  <  1:475860/143‑1 (MQ=255)
                                                                                 aCCAGCATACCGTTGGAGCGATCGCCCGCTGTTCCCCCCTCCTGTAAACCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGAt                                                           <  2:382316/143‑1 (MQ=255)
                                                                                 aCCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTCATCGCCAGCggt                                                           >  2:394693/1‑141 (MQ=255)
                                                                                   cAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTc                                                         >  1:814544/1‑143 (MQ=255)
                                                                                              ttGGGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTAAATGCTTTATTTAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCa                                              <  1:807411/143‑1 (MQ=255)
                                                                                               tGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAg                                             >  1:372843/1‑143 (MQ=255)
                                                                                                        gCCCGCTGTTCCCCCATTCTGTATAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCTGCGGTTCGTCACCGTGCAGACGGTTGcc                                    <  2:136073/143‑1 (MQ=255)
                                                                                                        gCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGATCAATATCGCCCCTTTTTGCTCGCCAGCGATTCGTCACCGTGCAGACGGTTAcc                                    >  2:2797/1‑143 (MQ=255)
                                                                                                         cccGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCGGACGGTTGGCg                                   >  2:284847/1‑143 (MQ=255)
                                                                                                         cccGCTGCACCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGAGTCGTCACCGTGCAGACGGTTGCCg                                   <  1:934775/143‑1 (MQ=255)
                                                                                                          ccGCTGTTCCCCCCTACACCATAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGt                                  <  2:823251/143‑1 (MQ=255)
                                                                                                             cTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGtcac                               <  2:957995/143‑1 (MQ=255)
                                                                                                              tGTTCCCCCATACTGTAAAGCCGGAGACCTGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGtcact                              <  2:863595/143‑1 (MQ=255)
                                                                                                                   ccccATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCACCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTa                         >  1:228807/1‑143 (MQ=255)
                                                                                                                      cATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCCCCGTGCAGCCGGTTGCCGTCACTCACTAAAt                      >  2:410202/1‑143 (MQ=255)
                                                                                                                         aCTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAACTTAt                   >  2:558556/1‑143 (MQ=255)
                                                                                                                          gtGTAACGCCAGAGACATGCTCCGGCTTTACAGTATTACTGAGACTACACCCATCGAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATg                  <  1:987514/142‑1 (MQ=255)
                                                                                                                           tGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATgg                 <  2:873372/143‑1 (MQ=255)
                                                                                                                             tAAAGCCGGAGCATGTCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATgggg               >  1:1018935/1‑143 (MQ=255)
                                                                                                                              aaaGCCGGAGCATGTCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCACTATGGGCCCTTTTTGATACCCAGCCAGGCGTCACCGTGCAGACGGTTGCCGTGACTCACTAAATTATggggt              >  1:207392/1‑142 (MQ=255)
                                                                                                                               aaGCCGGAGCATGTCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATCTCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGa             >  1:304375/1‑143 (MQ=255)
                                                                                                                               aaGCCGGAGCATGTCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCGCTCACTAAATTATGGGGGa             >  1:480435/1‑143 (MQ=255)
                                                                                                                                     tgtaCATGTTCCGGCTGGACCGTCTGACAGAGAATACACCCATCCAGCATCCTCGAAGTTTCATTATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGa       <  2:1065828/140‑1 (MQ=255)
                                                                                                                                         cATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACAGTGCAGACGGAACACGTTACTCACTAAATTATGGGGGGCAGTGaacaa   >  1:748968/1‑143 (MQ=255)
                                                                                                                                         cATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATAGCGCCCCTTTTTCATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGAGAGTGaacaa   >  1:755156/1‑143 (MQ=255)
                                                                                                                                          aTGCTCCGGCTTTCCAGTCTGACGTAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGaacaac  <  1:744044/143‑1 (MQ=255)
                                                                                                                                          aTGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACCGTGaacaac  >  1:680825/1‑143 (MQ=255)
                                                                                                                                             |                                                                                                                                            
AACCCTGTTTACCCGGAGAGTTGATGCAGATTGCCAGTGGCATGATTTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACATGCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAAC  >  NC_000913/4520364‑4520644

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: