New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 316201NA (NA)6 (0.110) 6/246 NT NA noncoding (973/1255 nt) IS3 repeat region
?NC_000913 = 316220 NA (NA)noncoding (992/1255 nt) IS3 repeat region

Only 100 of 289 total aligned reads displayed.

GTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/316051‑316201
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagattatGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGA  <  NC_000913/316220‑316079
                                                                                                                                                                                                                                                                                                     
ggCACGTGCCCGCATGGGCGGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGGTCACACGGACCGTGGAGGCCAGTACTGTTCAG                                                                                                                                                        <  2:193269/141‑1
ccCACGTGCCGTCACTCGCTGGTCGATGTCCCCACTCATGACGGCGCAACTGGCCTCCGCTGCCCTGCAGATGCCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAG                                                                                                                                                        <  2:402854/141‑1
GTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGTGATGCTCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAG                                                                                                                                                        <  1:631557/143‑1
GTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAG                                                                                                                                                        >  1:652507/1‑143
GTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGGTCACACGGACCGTGGAGGCCAGTACTGTTCAG                                                                                                                                                        >  2:953801/1‑143
GTCACGTGCCGTCATCGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGCGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAG                                                                                                                                                        <  1:274726/143‑1
GTCACGGGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAG                                                                                                                                                        <  2:552085/143‑1
 gCACGTGCCGTGATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACGGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGC                                                                                                                                                       <  1:1094882/142‑1
 TCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGCTGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGC                                                                                                                                                       >  1:434608/1‑143
 TCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGACCGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGC                                                                                                                                                       >  2:1042781/1‑143
 TCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCCGTACGGTTCAGC                                                                                                                                                       >  1:499867/1‑143
 TCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGC                                                                                                                                                       >  2:1086086/1‑143
 TCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGC                                                                                                                                                       >  1:593788/1‑143
 TCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGGTATCGCTCACCCGGACCGTGGAGGCCAGTACTGTTCAGg                                                                                                                                                       >  2:24669/1‑142
 TCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGGAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGC                                                                                                                                                       >  1:513365/1‑143
 TCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGCAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGGGGAGGCCCGTCCTGTTCAGC                                                                                                                                                       >  1:137437/1‑143
 TCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCATAAGAGGCCCCGGACCGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGC                                                                                                                                                       >  2:261457/1‑143
 TCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGACGGCGTAAGAGGCCCCGGAACGCTATCGTTCACCCGGACCGAGGAGGCCAGTACTGTTCAGa                                                                                                                                                       >  1:555838/1‑142
  cgcgcGCCGTTATTGGCTGGTCAATGTCGCCCCGCGTGGCGGCGCAACTTGCCTGCGATGCCCTGCAGCTGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCA                                                                                                                                                      <  2:370842/138‑1
  CACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCACCTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTGATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCA                                                                                                                                                      <  1:827778/143‑1
  CACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCTCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCA                                                                                                                                                      <  1:692823/143‑1
  CACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCA                                                                                                                                                      <  1:1060024/143‑1
  CACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCA                                                                                                                                                      <  1:975537/143‑1
  CACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCAGGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCA                                                                                                                                                      <  2:619564/143‑1
  CACGTGCCGTTATTGGCTGGTCAACGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCACCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCA                                                                                                                                                      <  1:697476/143‑1
  CACGTCCTGTTCTCGGCTGGTCAATGGCGCCACGCATGACGGCGGAACTGGCCTGCGATGCCCTGCAGAGGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCA                                                                                                                                                      <  2:214500/143‑1
  CACGGGCGGTTATTGGCGGGTGCGTTGCGCCACGCGTGGCGGCGCAACTGGCGTGCGATGCGCTGCAGATGTCGCTTTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCA                                                                                                                                                      <  2:718076/143‑1
  CACCTGCCGTTGTGGGCTGGTCCGTGTCGCCACGCATGACGGCGCACCTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAACAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCA                                                                                                                                                      <  2:530239/143‑1
   ACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGCCCGTGGAGGCCAGTACTGTTCAGCAG                                                                                                                                                     >  1:231932/1‑143
   ACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAG                                                                                                                                                     <  1:841146/143‑1
   ACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGGTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAG                                                                                                                                                     >  1:993170/1‑143
   ACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGAGGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATAGACAGCTCGGTGAGTGGGGGCCAGTACTGTTAAGCAG                                                                                                                                                     >  1:460508/1‑143
    ggtggaGTTATTGGCTGGTCAAGGTCGCCACGCATGACGGCGCAACGGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGA                                                                                                                                                    <  1:647627/137‑1
    ctTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGA                                                                                                                                                    <  1:679754/141‑1
    cggGCCGTTATTGGCTGGTCAATGTCGCCACGCATGCCGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGA                                                                                                                                                    <  1:1008296/140‑1
    cgcGCCGTTCGTCGCTGGTCAGTGTCGCCACGCCTCACGGCGTAACGGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGA                                                                                                                                                    <  2:125513/140‑1
    CGTGCGGTTATGGGCTGGTCGATGTCGCCACGCATGACGGCGCGGCTGGCCTGCGATGCCCTGCAGATGCCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGA                                                                                                                                                    <  2:303536/143‑1
    CGTGCCGTTCTTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGA                                                                                                                                                    <  1:662831/143‑1
    CGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGA                                                                                                                                                    <  1:953228/143‑1
    CGTGCCGTTATTGGCTGGTCAATGCCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGA                                                                                                                                                    <  2:66393/143‑1
     ggGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGAT                                                                                                                                                   <  1:899632/141‑1
     GTGGCGTTATTGGCTGGTCAATGTCGCCACGCAGGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGAT                                                                                                                                                   <  2:350538/143‑1
     GTGCCGTTATTGGCTGGTCAGTGTCGCCACGCATGGCGGCGCAAGTGGCCTGCGAGGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGAT                                                                                                                                                   <  2:50447/143‑1
     GTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATTGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGAT                                                                                                                                                   >  2:446420/1‑143
     GTGCCGTTATTGGCGGGGCAATGTCGCCACCTTTTCTGTCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGAT                                                                                                                                                   <  2:485996/143‑1
     GTGCCGTTATGCGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGTCTAGTACTGTTCAGCAGAT                                                                                                                                                   <  2:138281/143‑1
     GTGCCGTGATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGCTGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACAGTGGAGGCCAGTACTGTTCAGCAGAT                                                                                                                                                   <  1:285320/143‑1
      TGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGATGCCCCGGAACGTTATAGTTCACACGGACCGTGGAGGCCATTACTGTTCAGCAGATT                                                                                                                                                  >  1:218866/1‑143
      TGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATT                                                                                                                                                  <  1:114970/143‑1
      TGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATT                                                                                                                                                  >  1:536932/1‑143
      TGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACCGTTCAGCAGATT                                                                                                                                                  >  1:363953/1‑143
      TGCCGTTATTGGCTGGTCAATGCCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATT                                                                                                                                                  <  2:675562/143‑1
       GCCGTTGTTTGCTGGTCAGTGCCGCCACAGATGTGGGCGCAAATGGCTGGCGATGCCCTGCAGGTGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTA                                                                                                                                                 <  2:10468/143‑1
       GCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCGGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTGCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTA                                                                                                                                                 <  1:152236/143‑1
        CCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTgt                                                                                                                                                >  1:373284/1‑141
          GTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGCTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTAcca                                                                                                                                              >  2:158817/1‑140
           TTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGCACGTTATCGTTTACACGGGCCGTGGAGGCCAGTACTGTTTAGCAGAagatcag                                                                                                                                             >  1:40708/1‑136
           TTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGATCACACGGACCGCGGAGGCCAGTACTGTGCAGCAGAcgaccag                                                                                                                                             >  2:709406/1‑136
                               CCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTATGCCGCTTCAGTTGCGCCTGATAA                                                                                                                         <  1:970739/143‑1
                                         CGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAAC                                                                                                               <  2:893022/143‑1
                                                                                                                                          ccacggtGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGT              <  2:737677/136‑1
                                                                                                                                             ctCAGATTATTCCGTTTCTGTTGCGCCTGACAATCTGCTGAACCGTACTCGCCTCCACGGTCCGTGTGAACGATAACGTTCCGCGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCAT           <  2:418372/141‑1
                                                                                                                                              GCAGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGGTAACGTTCCGGGGCCTCTTACGCCGCCACCGCGCCACCTGCGGGGCCTCGCAGGCCAGTCGCGCCGgcctg          >  1:740121/1‑138
                                                                                                                                              GCAGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGCTAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCCTCGCAGGCCCGCTGCGCCGTCATG          >  1:890101/1‑143
                                                                                                                                              GCAGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCGGTCATG          >  2:110331/1‑143
                                                                                                                                              GCAGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATG          >  2:324547/1‑143
                                                                                                                                              GCAGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATG          >  1:860243/1‑143
                                                                                                                                              GCAGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCAACGCTCCGTGTGACCGTTGATCTTTCGTGGCCTCTTACGCCGCCACCGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCAcg          >  1:810808/1‑141
                                                                                                                                              GCAGATTATGCAGCTTCAGTTACGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGCTCCGTGTGAACGCTAACGGTCGGGGGCATCTTACGCCGCCACAGCGCCATCTGCAGCGCATCGCAGGCGCGTTGCGCCCTCATG          >  2:589070/1‑143
                                                                                                                                              GCAGACTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATG          <  1:330105/143‑1
                                                                                                                                               CAGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCCTGC         >  1:288647/1‑143
                                                                                                                                               CAGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGC         <  1:309990/143‑1
                                                                                                                                                AGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCG        >  1:933609/1‑143
                                                                                                                                                AGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCG        >  1:1073699/1‑143
                                                                                                                                                AGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCAAGCTCGCGTTCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCG        >  2:230861/1‑143
                                                                                                                                                 gcgTATCCCGCTTCGGTTGCGCCTGATAATCTGCTGCCAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTG      <  2:609459/140‑1
                                                                                                                                                 gagTATGCCGCTTCAGTTGCGCCTGTTAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGT       <  2:766099/140‑1
                                                                                                                                                 GATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGT       <  1:172277/143‑1
                                                                                                                                                  atcATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTG      <  1:103892/140‑1
                                                                                                                                                  ATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACCGTAATGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCACCGCGGGCCCGTTCCGCCGGCACGCGcg      >  1:13270/1‑141
                                                                                                                                                  ATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCCGTTGCGCCGTCATGCGTG      >  1:128514/1‑143
                                                                                                                                                  ATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTG      >  1:615747/1‑143
                                                                                                                                                  ATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAACGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTG      <  2:886841/143‑1
                                                                                                                                                  ATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAAAGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGAGCCGTCATaagca      >  2:313318/1‑138
                                                                                                                                                  ATTATGCCGCTTCAGTTGCGCCCGATAATCTGCTGACCAGTACTGGCCTCCACGGTCCGTGTGAACGATACCGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTG      <  1:423364/143‑1
                                                                                                                                                   TTATGCTGCTTCCGTTGCGGCTGATAATCTGCTGGACGGTACTGGCCTCCACGGTCCGTGGGGACGATAACGTTGCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGGATCGCAGGCCAGTTGCGCCGTCATGCGTGG     <  2:836402/143‑1
                                                                                                                                                   TTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGCACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGG     <  1:96635/143‑1
                                                                                                                                                   TTATGCCGCTTCAGTTGCGCCCGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGG     <  2:632489/143‑1
                                                                                                                                                   TTATGCCGCTTCAGTGGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGG     <  1:714805/143‑1
                                                                                                                                                   TTATGCCGCGTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGG     <  1:1006882/143‑1
                                                                                                                                                    gATGCCGCTTCAGTGGCGCCTGATGATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGC    <  1:384444/142‑1
                                                                                                                                                    TATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGACTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGC    <  2:1001713/143‑1
                                                                                                                                                    TATGCCGCTCCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGC    <  1:915871/143‑1
                                                                                                                                                      TGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGA  <  1:73360/143‑1
                                                                                                                                                      TGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGCGGCCTCTTCCGCCGCCCCAGCGCCATCTGCAGGGCATCGCCGGCCAGGTGCGCCGCCATCCGTGGCGA  >  2:871588/1‑143
                                                                                                                                                      TGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGAAAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGA  <  1:254143/143‑1
                                                                                                                                                      TGCCGCTTCAGTTGCGCCTGATAATCTGCCGAACAGTACTGGCTGCCTCTGTCCCGGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGA  <  1:804593/143‑1
                                                                                                                                                      TGCCGCTACAGTTGCGACTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGCACGATAACGTTCCGGGGCCTCTTACGCCGCGACAGAGCCATCTGCAGGGCCTCGCAGGCCCGCTGAGGCGCCATGCGTGCCGA  >  2:986805/1‑143
                                                                                                                                                      TGCCGCGTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGA  <  1:779083/143‑1
                                                                                                                                                      TGCCGCCTCAGTGGCGGCTGATAGTCTCCCGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTCCGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGA  <  1:1066723/143‑1
                                                                                                                                                                                                                                                                                                     
GTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/316051‑316201
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagattatGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGA  <  NC_000913/316220‑316079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.