New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 899695	NA (NA)	4 (0.070)	4/250	NT	NA	intergenic (+50/+149)	rlmC/artJ	23S rRNA m(5)U747 methyltransferase/L‑arginine ABC transporter periplasmic binding protein
	?	NC_000913	= 899725	NA (NA)					noncoding (29/34 nt)	other	REP82a

GCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATgccggat‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/899555‑899695 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACATGCGGCTTTTTTATTGCTTCACCAGCAGCGTCAGCACTTCATAGTGCGCGGTATGCGGGAACATATCGAAAAGCTGCA  <  NC_000913/899725‑899578                                                                                                                                                                                                                                                                                                   GCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGC                                                                                                                                                    <  1:100318/143‑1  CCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAACTGCGCGTTGTTTATGCC                                                                                                                                                   >  2:743204/1‑143     GGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGA                                                                                                                                                <  1:432979/143‑1      GGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGAT                                                                                                                                               >  2:861033/1‑143                            GCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATAAGGCGTTTACGCCGCATCCGG                                                                                                                         <  2:503160/143‑1                                                           TATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATAAGGCGTTTACGCCGCATCCGGC                                                                                                                        <  1:209427/113‑1                                                           TATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATAAGGCGTTTACGCCGCATCCGGC                                                                                                                        >  2:209427/1‑113                                                                                                                                     GTTGTTTATGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCAGCACATGCGGCTTTTTTATTGCTTCACCAGCAGCGTCAGCACTTCATAGTGCGGGGTATGCGGGAACAa                >  2:453094/1‑142                                                                                                                                              GCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACATGCGGCTTTTTTATTGCTTCACCAGCAGCGTCAGCACTTCATAGTGCGCGGTATGCGGGAACATATCGAAAAG       >  1:1095281/1‑143                                                                                                                                               CCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACATGCGGCTTTTTTATTGCTTCACCAGCAGCGTCAGCACTTCATAGTGCGCGGTATGCGGGAACATATCGAAAAGC      <  2:411644/143‑1                                                                                                                                                CGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACATGCGGCTTTTTTATTGCTTCACCAGCAGCGTCAGCACTTCATAGTGCGCGGTATGCGGGAACATATCGAAAAGCT     <  2:511948/143‑1                                                                                                                                                  GATAAGGCGGTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACATGCGGCTTTTTTATTGCTTCACCAGCAGCGTCAGCACTTCATAGTGCGCGGTATGCGGGAACATATCGAAAAGCTGC   <  1:435339/143‑1                                                                                                                                                   ATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACATGCGGCTTTTTTATTGCTTCACCAGCAGCGTCAGCACTTCATAGTGCGCGGTATGCGGCAACATATCGAAAAGCTGCA  >  2:812366/1‑143                                                                                                                                                                                                                                                                                                   GCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATgccggat‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/899555‑899695 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACATGCGGCTTTTTTATTGCTTCACCAGCAGCGTCAGCACTTCATAGTGCGCGGTATGCGGGAACATATCGAAAAGCTGCA  <  NC_000913/899725‑899578

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.