New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 303629	51 (0.900)	4 (0.080)	3/238	NT	7.5%	intergenic (+24/+224)	yagU/ykgJ	inner membrane protein that contributes to acid resistance/putative zinc‑ or iron‑chelating domain‑containing protein YkgJ
	?	NC_000913	= 303636	53 (1.040)					intergenic (+31/+217)	yagU/ykgJ	inner membrane protein that contributes to acid resistance/putative zinc‑ or iron‑chelating domain‑containing protein YkgJ

TTCTGAAATTTTTGGACATTTAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCATTGTTGCTGGCAAATAGAA  >  NC_000913/303488‑303771                                                                                                                                              |                                                                                                                                               ttCTGAAATTTTTGGACATTTAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCa                                                                                                                                               >  1:318503/1‑143 (MQ=255)  tCTGAAATTTTTGGACATTTAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCac                                                                                                                                              >  1:542480/1‑142 (MQ=255)   cttaaaTTGTTGGACATTTAGTCTGGTTCTTGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTGTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCaaa                                                                                                                                             <  2:389382/140‑1 (MQ=255)   cTGAAATTTTTGGACATTTAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCaaa                                                                                                                                             <  1:537632/143‑1 (MQ=255)    tGAAATTTTTGGACATTTAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACCGAATTACTCATGAGCCAGACCCTGAGATCCTGTTAGGCTCAAACAGACAATGCATTGACTGGTAAACATGGCGCaaac                                                                                                                                            >  2:1062153/1‑142 (MQ=255)    tGAAATTTTTGGACATTTAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAAt                                                                                                                                            >  1:28748/1‑143 (MQ=255)        aTTTTTGGACATTTAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACCGCATTCATCGTGAGACAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAg                                                                                                                                        >  1:1101658‑M2/1‑142 (MQ=255)          ttctGGACATTTAGTCGGGTTCTGGTCTATTGAAATTATTCGCAGCGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcg                                                                                                                                      <  1:871871/140‑1 (MQ=255)               gACATTTAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccatt                                                                                                                                 >  2:510599‑M2/1‑135 (MQ=255)                aCATTTAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCtgtatttgcgccattt                                                                                                                                <  1:842593‑M1/143‑17 (MQ=255)                aCATTTAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCtgtatttgcgccattt                                                                                                                                <  1:290042‑M1/143‑17 (MQ=255)                aCATTTAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccattt                                                                                                                                >  1:871351‑M2/1‑134 (MQ=255)                   tttAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccattttta                                                                                                                             >  1:312474‑M2/1‑131 (MQ=255)                    ttAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccatttttat                                                                                                                            <  1:572083‑M2/143‑14 (MQ=255)                        tctggttctggtCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGt                                                                                                                        >  1:816768/1‑143 (MQ=255)                            gttctggtCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTaaa                                                                                                                    <  1:611446/143‑1 (MQ=255)                                   gcTATTGAAAGTATTCGCAGAGAGTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTg                                                                                                             <  2:901527/142‑1 (MQ=255)                                      aTTGAAATGATTCGCAGAGATTTACGAATCAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCtt                                                                                                          <  2:1038220/143‑1 (MQ=255)                                       ttGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATCAAAATGGCGCAAATACAGCGCCATTTGTATAGGTTAAAAACATTGCttt                                                                                                         >  1:93200/1‑143 (MQ=255)                                        tGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCtgtatttgcgccatttttatcattcaatgcattatctgtt                                                                                                        <  1:290664‑M1/143‑41 (MQ=255)                                         gAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCttttt                                                                                                       >  1:236634/1‑143 (MQ=255)                                           aagtatccgcAGGGGGTTACGCAACAGAATTGCTCATGAGGCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCtgtatttgcgccatttttatcattcaatgcattatctgtttga                                                                                                     <  2:280970‑M1/140‑44 (MQ=255)                                              tattCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATAtt                                                                                                  >  1:998272/1‑143 (MQ=255)                                                   gCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGAt                                                                                             >  2:529061/1‑143 (MQ=255)                                                   gCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGAt                                                                                             <  2:857058/143‑1 (MQ=255)                                                    cAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATg                                                                                            >  1:548249/1‑143 (MQ=255)                                                        gaTTTACGAAACAAAATTACTCACGAGCCAGTCCCTTAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGa                                                                                        <  1:67368/143‑1 (MQ=255)                                                         aTTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAACGCCATTTTTATAGGTTAAAAAAATTGCTGTTTATCTTCTGATGCAGAt                                                                                       >  2:735629/1‑143 (MQ=255)                                                          tttACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTAAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTATGATGCAGATa                                                                                      >  1:159876/1‑143 (MQ=255)                                                           ttACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAg                                                                                     >  2:889493/1‑143 (MQ=255)                                                              cGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGAAAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCa                                                                                  >  1:322041/1‑143 (MQ=255)                                                               gAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCTGGTAGTccg                                                                                 >  1:21911/1‑141 (MQ=255)                                                               gAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAg                                                                                 >  1:138451/1‑143 (MQ=255)                                                                  aCAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGa                                                                              <  1:537093/143‑1 (MQ=255)                                                                  aCAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGa                                                                              <  1:610549/143‑1 (MQ=255)                                                                   cAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAg                                                                             <  1:472442/143‑1 (MQ=255)                                                                    aGAATTACTCATGGGCCGGTCCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAACTGCCCCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGt                                                                            <  2:833546/143‑1 (MQ=255)                                                                    aGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGt                                                                            >  1:633990/1‑143 (MQ=255)                                                                      aaTTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGtat                                                                          >  1:618251/1‑143 (MQ=255)                                                                       aTTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGtata                                                                         <  2:318503/143‑1 (MQ=255)                                                                        ttACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTatat                                                                        >  2:1047400/1‑143 (MQ=255)                                                                         tACTCATGAGCCAGACCCTGAGATCCCTTTAGTCTCAAACAGACAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATc                                                                       <  1:1043933/143‑1 (MQ=255)                                                                               tGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATGTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTa                                                                 <  2:236634/143‑1 (MQ=255)                                                                                gAGCCAGACCCTGAGACCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATCGTCCGTGAGTATATCGCGCTAc                                                                >  2:372081/1‑143 (MQ=255)                                                                                   ccAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTc                                                             >  2:346357/1‑143 (MQ=255)                                                                                    ttgaaccTTAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCa                                                            <  2:652272/138‑1 (MQ=255)                                                                                    cAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCCGATAGTCCGTGAGTATATCGCGCTACTTCa                                                            >  2:879967/1‑143 (MQ=255)                                                                                    cAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCa                                                            >  1:902848/1‑143 (MQ=255)                                                                                     aGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAg                                                           >  1:345180/1‑143 (MQ=255)                                                                                          cTGAGATCCCTGTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGgatga                                                      <  1:111076/143‑1 (MQ=255)                                                                                            gagaTCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGatgatg                                                    <  1:184140/143‑1 (MQ=255)                                                                                            gagaTCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGatgatg                                                    <  2:379010/143‑1 (MQ=255)                                                                                               aTCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATCGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAg                                                 >  1:160383/1‑143 (MQ=255)                                                                                                   cTTTAGGCTGAAACAGATAATGCATTGAATGAT‑AAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCg                                            <  2:28812/143‑1 (MQ=255)                                                                                                   cTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATcc                                             >  1:468510/1‑143 (MQ=255)                                                                                                     ttAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCga                                           <  2:816768/143‑1 (MQ=255)                                                                                                      tAGGCTCAAACAGATAATTCATGGAATGATAAAAATGGCGCAAAGACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCgaa                                          <  1:171438/143‑1 (MQ=255)                                                                                                      cggacacAAACAGACAATCCATTTTATTATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCgaa                                          <  1:799165/137‑1 (MQ=255)                                                                                                       aGGATCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCACCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCgaag                                         <  1:745351/143‑1 (MQ=255)                                                                                                        ggCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCgaaga                                        <  2:206975/143‑1 (MQ=255)                                                                                                         gCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCggagaa                                       >  2:368015/1‑143 (MQ=255)                                                                                                           tCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctgcctcatgagcaattctgttgcgtaaccccctgcggatactt                                     <  2:280970‑M2/143‑101 (MQ=255)                                                                                                             aaaCAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGCTAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCt                                   >  1:173875/1‑143 (MQ=255)                                                                                                              aaCAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgtttcgtaaatctctgcgaataatttca                                  <  1:290664‑M2/143‑104 (MQ=255)                                                                                                                     aaTGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACagaaga                           <  2:593634/143‑1 (MQ=255)                                                                                                                        gCATTGTATGATATAGATGGCGCAACTACAGCGCCATTTTTATAGGTTAAAAACATTGCTTGTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAcgagag                        <  2:918132/143‑1 (MQ=255)                                                                                                                          aTTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGc                      >  1:558930/1‑143 (MQ=255)                                                                                                                            tGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCAt                    >  1:265819/1‑143 (MQ=255)                                                                                                                                  aTAAAAATGGCGCtgtatttgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgtttcgtaaatctctgcgaataatttcaatagaccagaaccagactaa              <  1:572083‑M1/143‑131 (MQ=255)                                                                                                                                   tAAAAATGGCGCtgtatttgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgtttcgtaaatctctgcgaataatttcaatagaccagaaccagactaaa             >  1:312474‑M1/1‑12 (MQ=255)                                                                                                                                      aaaTGGCGCtgtatttgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgtttcgtaaatctctgcgaataatttcaatagaccagaaccagactaaatgt          >  1:871351‑M1/1‑9 (MQ=255)                                                                                                                                      aaaTGGCGCAAATACAgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgtttcgtaaatctctgcgaataatttcaatagaccagaaccagactaaatgt          <  1:842593‑M2/143‑128 (MQ=255)                                                                                                                                      aaaTGGCGCAAATACAgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgtttcgtaaatctctgcgaataatttcaatagaccagaaccagactaaatgt          <  1:290042‑M2/143‑128 (MQ=255)                                                                                                                                       aaTGGCGCtgtatttgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgtttcgtaaatctctgcgaataatttcaatagaccagaaccagactaaatgtc         >  2:510599‑M1/1‑8 (MQ=255)                                                                                                                                             gcAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTAAGGATGATGTAGATGCGAAGAACGCTAAAGCAGAGAGGCATGGTTGCTGGCCAATaga   >  2:285360/1‑143 (MQ=255)                                                                                                                                              ctgtatttgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctgtctcacgatgaatgcggtttcgtaaatctctgcgaataatttcaatagaccagaaccagactaaatgtccaaaaat  >  1:1101658‑M1/1‑1 (MQ=255)                                                                                                                                              cAAATACCGGTCCATTTTTATAGGTTGTAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCATTGTTGCTGGCAAATagaa  <  2:366966/143‑1 (MQ=255)                                                                                                                                              cAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCATTGTTGCTGGCAAATagaa  <  2:138451/143‑1 (MQ=255)                                                                                                                                              cAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCATTGTTGCTGGCAAATagaa  <  1:697398/143‑1 (MQ=255)                                                                                                                                              |                                                                                                                                               TTCTGAAATTTTTGGACATTTAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCATTGTTGCTGGCAAATAGAA  >  NC_000913/303488‑303771

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.