| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,377,791 | A→T | 6.4% | intergenic (‑69/+20) | blc ← / ← ampC | outer membrane lipoprotein Blc/beta‑lactamase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,377,791 | 0 | A | T | 6.4% | 211.8 / 4.4 | 78 | intergenic (‑69/+20) | blc/ampC | outer membrane lipoprotein Blc/beta‑lactamase |
| Reads supporting (aligned to +/- strand): ref base A (35/37); new base T (2/3); total (37/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.11e-01 | |||||||||||
GGCGTAGGAGAACTGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACC > NC_000913/4377652‑4377930 | ggcgTAGGAGAACTGCAGGCAACGACCAGAAATGCAGCTGTCGCGGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAAtt < 1:935548/143‑1 (MQ=255)agcgTAGGAGCAGCGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGACGAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGCAAAtt < 2:919088/142‑1 (MQ=255) cgcaGGAGAACTGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCg < 1:923905/140‑1 (MQ=255) tAGGAGAACTGCAGGCAACGACCAGAAATGCAGCTGTCGTTGCTGCAACGAGAGGGAGCAGGTGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGa < 1:562307/143‑1 (MQ=255) aGGAGAACTGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGAc > 1:1065644/1‑143 (MQ=255) ggAGAACTGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAAAGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGAGAGCAAGGAAAAGCGGAGAAAAGGTCCGAGAATTCGGAcc > 1:159368/1‑143 (MQ=255) gaagaACCGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACGGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAATTTTCGGAcc < 1:1072344/141‑1 (MQ=255) gagaACCGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAATTTTCGGAcct < 2:211706/143‑2 (MQ=255) aggaCTGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAATTTTCGGAcctt < 2:469296/140‑3 (MQ=255) aaCTGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAACAGCGGAGAAAAGGTGCGCAAATTCGGACCCGaa > 1:1088360/1‑142 (MQ=255) ccTGCAGCCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGCGAGCAGGCGCATAGATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTATATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATg < 1:924274/142‑1 (MQ=255) cTGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATgg > 1:87623/1‑143 (MQ=255) tGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGGCAGCAAGGGAGAGCGGAGAAAAGGGCCGAAAATTCGGACGCAATGGa > 1:774971/1‑143 (MQ=255) gCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTGACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGaa < 2:160018/143‑1 (MQ=255) aGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAAtt < 1:1086090/143‑1 (MQ=255) cAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGACTTTTa > 1:209119/1‑143 (MQ=255) aaCGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAACAGCGGAGAAACGGCCCGAAAATCCGGACCGGCTGGAATCTTAc > 2:264112/1‑143 (MQ=255) aCGACCAGAAATGCAGCTGTCGCTGCGGCAACGGGAGGGAGCAGGCGCATAAAGGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACt < 2:851592/143‑1 (MQ=255) aCCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGCCCCGATGGAATTTTACTGTa > 2:708006/1‑143 (MQ=255) aCCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTa > 2:706966/1‑143 (MQ=255) ccAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTGCTTACGGGGTTTTTTAAGAT‑TTTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGGATTTGACTGTag > 1:362468/1‑143 (MQ=255) aGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGAAGAACTTTCATTGTagag > 1:978390/1‑143 (MQ=255) aGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTGTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGAGGGAATTTTACTGTagag > 1:608196/1‑143 (MQ=255) gAAGTGCGGCTGTCGGTGCGGGCACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGc < 2:529515/143‑1 (MQ=255) aaaTGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCg < 2:741592/143‑1 (MQ=255) aTGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTACTTACTGGTAATTTACTCAGATGT‑TCTTACATCATGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGtt > 1:1102849/1‑143 (MQ=255) gCAGCTGGCTGTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAGG‑GGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTaa < 2:147871/143‑1 (MQ=255) aGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGa < 1:281262/143‑1 (MQ=255) tCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTATAAG‑TGTAGATGACAGCACGGAATAGCGGAGAAAAGGTCCGAAAATTCGTACCCGAAGGACTTTTCCTGTAGAGCGTTAACACTCTg > 2:816997/1‑143 (MQ=255) gCTGCGGCAACGAGAGTGAGCAGGCGCATAAATGTTTCCTTACTGGTTATTGTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGCAGAAACGGTCCGCAAATTAGGACCCGATGGAATTTTACTGCAGCGCGTTACGAAACTGca > 2:830022/1‑142 (MQ=255) gCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGCCAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTAATGTAGAGAGGTAAGCATCTGcc > 1:262415/1‑143 (MQ=255) tGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATGTTACTGTAGAGCGTTAAGAATCTGCCAg > 1:450749/1‑143 (MQ=255) cGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAggc < 1:777029/143‑1 (MQ=255) ggCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAggcg < 1:646708/143‑1 (MQ=255) gCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGGAAAGCGGAGAAAACGTCCGAAAATTCGGACCCGATGGAATGTTACTGTAGAGCGTCAAGAACCTGcgcggagg > 2:800318/1‑136 (MQ=255) gagaGGGAGCAGGCGCATAACTGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGAGAGCAAGGACAAGCGGAGAAAAGGTCCGCAAATTCGGACCCGCTGGAATTTTACTGTAGAGCGTTACCCGTCGGCCAGGCGGCGTCg > 1:178664/1‑143 (MQ=255) gagaGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCg < 1:550220/143‑1 (MQ=255) agagGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGAAGATGAGAGCAAGGAAAAGCGGAGAAAAGGTACGAAAAGTCGGACCCGATGGAATTTTAACTTAGAGCGTTCAGAATCTGCCCCGCAGcgacga > 2:180963/1‑143 (MQ=255) gagGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGAc > 1:906680/1‑143 (MQ=255) cAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCt > 1:639316/1‑143 (MQ=255) aGGCGCGTAAGTGTTTCGTTCCTGGTGTTTTTCTAAG‑TGCAGATGAGAGCAAGGAAAAGCGGAGAAAAGGTCCGAAGATTCGGACCCGAGGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTg < 2:64236/143‑1 (MQ=255) aGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGGGCGTTAAGAATCTGCCAGACGGCGTCGACTCTCGCTg < 2:341546/143‑1 (MQ=255) ggCGCATAAATGTTTCCTTACTGGTTTTTTTTTAAG‑GTTAGTTTACAGCTTGGAAAATCGGAGACAATGTCCGATTATTCGGGCCCGTTGGAATTTTGCTGTATATCTTTATGAATCTGCCAGTCGGCTTCGTCTCTCGCTgg > 2:392821/1‑143 (MQ=255) gaTAAATGTTTCCTTACTGGTTTTTTTCTAAG‑GGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTg < 2:815867/142‑1 (MQ=255) cagaaaGGTTTCCTTGCTGGGTGTTGTCTTAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAAGTCGGACCCGATGGAATTCTACTGGAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTg < 2:30523/140‑1 (MQ=255) cATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGACTTTTACTGTAGCGCGTTAAGAATCTGCCAGGCGGCGTCAACTCTCGCTGGCTTg > 2:112166/1‑143 (MQ=255) gttCCTTACTGGTTCGTTGCTAAG‑TGTAGACGACAGCAAGGAAAAGCGGATAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGtt < 1:437575/142‑1 (MQ=255) tCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGtttt > 1:920217/1‑143 (MQ=255) ccTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGACAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGttttt < 1:628603/143‑1 (MQ=255) gtACTGGTTGTTTAAGAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTtttgt < 1:878967/142‑1 (MQ=255) cTGGTGTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTGACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTtttgtttg < 1:128756/143‑1 (MQ=255) tGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGc > 2:356789/1‑143 (MQ=255) gcttttttCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAGTTTTCGTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGCCTCTCGCTGGATTGGGGGGGGTTTTGTTTGCCa > 1:1054995/3‑143 (MQ=255) gTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATCGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGCTTGGGATAGTTTTTGTTTGCCa > 2:211314/1‑143 (MQ=255) gTTTTTTTCTAAG‑TGGAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCATCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCa < 1:1007383/143‑1 (MQ=255) tttttCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCa < 2:745119/140‑1 (MQ=255) tttttCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCa > 1:745119/1‑140 (MQ=255) tCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCAc > 1:643652/1‑143 (MQ=255) tAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGa < 1:708006/143‑1 (MQ=255) tAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGa < 1:706966/143‑1 (MQ=255) gaaG‑GGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCAGGATTGAGATAGTTTTTGTTTGCCAGCATCACGa < 2:135569/142‑1 (MQ=255) tgtAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGGTTGGGATAGTTTTTGTTTTCCAGCATGCCGATAcc > 1:529291/1‑143 (MQ=255) tgtAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCGGCATCACGATAcc > 1:311636/1‑143 (MQ=255) tgtAGAGGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATAcc < 1:644720/143‑1 (MQ=255) tAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCa > 2:574454/1‑143 (MQ=255) aTGACAGCAAGGAAAAGCGGAGAAAGGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGAGTCCCGGct > 2:141755/1‑143 (MQ=255) gaaGGAAAAGCGGAGAACAGTTCCGAAAATTCGGACACGATGGCACTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTc < 2:892767/142‑1 (MQ=255) aggggaaaGCGGAGAAAATGTCCGAAAATTCGGACCCGATGGAAGTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCt < 2:262415/138‑1 (MQ=255) aaGGAAGAGCGGAGAAAAGGTCCGAAAATTCGGGCCCGATGGAAGTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTGGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCt < 1:578894/143‑1 (MQ=255) gAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGAGGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGa < 1:327615/143‑1 (MQ=255) ggAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAAcg > 2:50278/1‑143 (MQ=255) ggAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAAcg < 1:647894/143‑1 (MQ=255) catcgggTCCGAATTTTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCCGCATCACGATACCCAGCTCTGTTTCTGGAAATAAcgcgg > 2:1067176/6‑142 (MQ=255) aaGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGCGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACAt < 1:667565/143‑1 (MQ=255) cggTCCGAAAATTCGGACCGGATTGAATTTTACTGTAGAGCGTTGAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTAGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATa < 2:582099/142‑1 (MQ=255) cGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTAc < 1:217678/143‑1 (MQ=255) cGAAAATTCGGACCCGAGGGAAGTTTACTGTAGAGCGTTAAGAATCGGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTAc < 1:217798/143‑1 (MQ=255) gAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACCTCGCTAcc > 1:600260/1‑143 (MQ=255) | GGCGTAGGAGAACTGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAG‑TGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACC > NC_000913/4377652‑4377930 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |