| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,090,126 | C→T | 6.7% | intergenic (+80/‑66) | hisL → / → hisG | his operon leader peptide/ATP phosphoribosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,090,126 | 0 | C | T | 6.7% | 196.6 / 5.3 | 77 | intergenic (+80/‑66) | hisL/hisG | his operon leader peptide/ATP phosphoribosyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (28/42); new base T (3/2); total (33/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.02e-01 | |||||||||||
ACAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATGCAGAAATCCGGCCGTTTAAGTGATGACTCACGCGAATTGCT > NC_000913/2089984‑2090265 | acaGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCAc < 1:1020463/143‑1 (MQ=255) agaCTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTc > 1:94472/1‑143 (MQ=255) ttttATGACACGCTTTCAATTTAAACACCACCTTCAGCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCACATCTTCCAGTGGTGCATGCACGCATGAGAAGGTCCCCGGTTGGTGATCTTCCggg < 2:1026584/143‑1 (MQ=255) ttttATGACACGCGTTCAATTTAAGCACCACCATCATCTCCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGGACGCATCAGAAAGCCCCCGGAAGATCACCTTCCggg < 2:611981/143‑1 (MQ=255) ttttATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGGTGATCTTCCggg < 1:866827/143‑1 (MQ=255) tgttATGACACGCGTTCCATTTAAGCACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCGTCCggg < 2:1029735/141‑1 (MQ=255) tttATTGCACGCGTTCAATTTAAACACCATCATCAGCCCCGTCATCCTGACTAGTCTTTCAGGCGATGTGTGCTCGAAGACATTCAGCTCTTCCAGTGGTGCATGATCGCATGAGAAAGCCCCCGGAAGATCACCTTCCgggg < 2:187179/143‑1 (MQ=255) aTGACACGCGTTCAATTTAAACACCACCATAATTACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCt > 2:791570/1‑143 (MQ=255) cacGCGTTCAATTTAAACACCACCATCATCACCATCCTCCTGACTAGCCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGCGCAAGACTCCGTGCGATCACCTTCCCGGGGcttctt > 1:200602/1‑143 (MQ=255) cAAGTTAAACACCACCATCATCACCATCAGCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAATCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTgcgc < 1:660985/143‑1 (MQ=255) ttttAACACCACCATCATCACCATCATCCTGTCTAGTCTTTCAGGCGATGTGTGCTGGCAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGt < 2:32333/143‑1 (MQ=255) tttAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGACGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGCAAGATCAGCTACCGGGGGCATCTTGATGgcgctgc > 2:772943/1‑140 (MQ=255) tAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTg < 1:576695/143‑1 (MQ=255) caccacCATCATCACCATCATCCTGACTAGTCTGTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATaa < 2:194127/143‑1 (MQ=255) ccaccaTCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACg < 1:868444/143‑1 (MQ=255) caccatcatcaccatcatCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACgg > 2:259967/1‑143 (MQ=255) caccatcatcaccatcatCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTGGATAACgg > 1:546312/1‑143 (MQ=255) caccatcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATGAGACGAGGGGGGCGTTTTTATTGCGCGGTTGATACCGGTGCAGAccg > 1:506940/1‑141 (MQ=255) caccatcatcCCGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGAGCACCTGCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAg < 1:413311/143‑1 (MQ=255) atcatcCTGCCTAGTCTTTCAGGCGATGTGTGCTGGAAGACAGTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGAGCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGttt < 1:915134/143‑1 (MQ=255) tcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTGTGAag > 1:20030/1‑143 (MQ=255) tGACTAGTCTTTCCGGCGATGTCTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGCAGCTCCCCCTCCGGGGGCTCTCTTATTGCGCGGTTGACAACGGTCCAGCCAGGTTTAAAGCgg > 2:150852/1‑143 (MQ=255) gACTAGTCTTTCAGGCGATGTGTGCTGGCAGACATTCAGATCTTCCAGTGGTGCATGCACGCCTGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTCTATTGCGCGGTTGATCACGGCTCCGCCACGTTTGACGAggc > 2:541038/1‑142 (MQ=255) gACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCCTGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTCTTTACTGCGCGGTTGATACCGGCTCAGACAGGGCTAAAGCGGa > 2:251651/1‑143 (MQ=255) gACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGa < 2:565656/143‑1 (MQ=255) ctggTCTTTCAGGCGATGTGTGCTGGAAGACAGTCTGCTCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAAt < 2:1071767/140‑1 (MQ=255) tCTTTCAGGCGAGGTGGGCTGGAAGATATTCAGATCTGCCAGTGGTGCATGAACGCATGGGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACa < 2:591312/143‑1 (MQ=255) tttCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAATGGTTCAGACAGGTTTAAAGAGGAATAACaaa > 1:752084/1‑143 (MQ=255) tttCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACgaa < 1:259967/143‑1 (MQ=255) gcAGGCGATGTGTGCTGGAAGACATTCAGATCTTGCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAAt < 2:161591/142‑1 (MQ=255) gCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATgaca < 1:737063/143‑1 (MQ=255) gCGATGTGGGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATgaca < 1:366386/143‑1 (MQ=255) tgtgCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGacaac > 2:151833/1‑143 (MQ=255) tgtgCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGacaac > 1:757458/1‑143 (MQ=255) tgtgCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGacaac > 2:610167/1‑143 (MQ=255) gtgCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGacaaca < 1:548039/143‑1 (MQ=255) tgCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAacac < 2:585038/143‑1 (MQ=255) tgCTGGAAGACATTCAGATCTTCCAGCGGGACATGAACGCATGAGAAAGCCCCCGGAAGATCACCTCCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGCcaccac < 2:531181/143‑1 (MQ=255) cTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTc < 1:478787/143‑1 (MQ=255) gAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTGTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGtt < 1:467616/143‑1 (MQ=255) aGACATTCAGATCTACCAGTAGTACATAAACCAATAAGAAAGCCACCAGAAGATCACCTACCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTa < 1:349242/143‑1 (MQ=255) ttCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTCTTTTATTGCGCGGTTGATAACGGTTAAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTGACGCac > 1:155749/1‑142 (MQ=255) tCAGATCTTCCAGTTGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATa < 1:27116/143‑1 (MQ=255) tCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACCCTCGTTTCCGCATa > 2:800145/1‑143 (MQ=255) tCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATa > 1:1059077/1‑143 (MQ=255) cAGATCTTCCAGTGGTGCATGAACGCATGAGCAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGATTACGCATAg > 2:18283/1‑143 (MQ=255) cAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAg < 1:887330/143‑1 (MQ=255) cAGACCTTCCAGTGGGGCATGAACGCATGAGAACGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATGGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAg < 1:495090/143‑1 (MQ=255) aTCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGCTTAAAGAGGAATAACAAAATGACCGACAACACTCGTTTACGCATAACTa > 2:471547/1‑143 (MQ=255) cTTCCAGTGGTGCATGAGCGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATg < 2:913323/143‑1 (MQ=255) cTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATg < 2:1069181/143‑1 (MQ=255) cTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATg < 1:791570/143‑1 (MQ=255) ttCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATGc > 1:222555/1‑143 (MQ=255) tgccAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATGc < 2:812224/141‑1 (MQ=255) tCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGCAGATCACCTTCGGGGGGCTTTTTTATTGCGCGGTTGATGACGGGTCAGACAGGGTTAAAGCGGAATAAGAGAATGACAGACAACGCCCGTTTACGCATAGCTATGCa > 2:376173/1‑143 (MQ=255) tCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATGCa < 1:151833/143‑1 (MQ=255) aGTTGTGCATGAACGCATGAGAAAGCCTTCTGAATTTCACCTTCCGGGGTCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTGTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATGCAGaa < 1:773567/143‑1 (MQ=255) aGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATGCAGaa > 2:181234/1‑143 (MQ=255) aGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATGCAGaa < 1:1013704/143‑1 (MQ=255) tggtgCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATGCAGAAAt < 1:653119/143‑1 (MQ=255) tgCATGAACGTATGAGAGAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATGCAGAAATCCg < 2:989517/143‑1 (MQ=255) attaccGCATGAGAAAGCCCTCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATGCAGAAATCCGGcc < 2:565391/138‑1 (MQ=255) gCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTCCGCTTGTCTATGCAGAAATCCGACCGTTTaa > 1:323569/1‑143 (MQ=255) gCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGGTTACGCATAGCTATGAAGAAATCCGGCCGTGTag > 2:508177/1‑142 (MQ=255) cATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATGCAGAAATCCGGCCGTTTAAg < 2:94472/143‑1 (MQ=255) tGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGATTAAATCGTCATCACGTGATTCCGGTTCAGACAGGTTTAAAGAGGAATAACAAAATAACAGACAACACTCGTTTACGCATAGCTATGCAGAAATCCGGCCGTTTAAGtg > 1:211429/1‑143 (MQ=255) aaaaaaGCCCCCGGAAGGTGATCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATGCAGAAATCCGGCCGTTTAAGtga > 1:818160/4‑143 (MQ=39) agaAAGCCCCGGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTGCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATGCAGAAATCCGGCCGTTTAAGtgat < 2:909537/143‑1 (MQ=255) agaAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATGCAGAAATCCGGCCGTTTAAGtgat < 1:449739/143‑1 (MQ=255) ccccGGAAGGTGATCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATGCAGCAATCCGGCCGTTCAAGCGAGGACTccc > 1:453865/1‑141 (MQ=255) ccccGGAAGGTGATCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATACAGAAATCCAAACGATTAAGTGATAACTCAc > 1:687566/1‑143 (MQ=255) cccGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGGTAACGGTTCGGACAGGTTTCAGGAGGAATCACAAAATGACGGGCAACACTCGTTTACGCATAGCTATGCAGAAATCCGGGCAGTTAGGTGATGACTcccc > 1:60107/1‑140 (MQ=255) cccGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATGCAGAAATCCGGCCGTTTAAGTGATGACTCAcg > 1:963155/1‑143 (MQ=255) ccGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATGCAGAAATCCGGCCGTTTAAGTGATGACTCAcgc > 2:289863/1‑143 (MQ=255) cGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGCATAACAAAATGACAGACAACACTCGTTTACGCATCGCTATGCAGAAATCCGGCAGTTTAAGTGATGACTccggct > 2:212138/1‑138 (MQ=255) agagCACCTTCCTGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAAGGACAGACAACTCTCGTTTACGCATAGCTCTGCAGAAAAACGACCGGTGGAGTGATGACTCACGCGAAtt < 2:967599/143‑1 (MQ=255) gATCACCTTCCGGGGGGTTTTTTATTGCGGTGTTGATAACGGGTCAGACAGGTTTGAAGAGGAATAACAAAATGACAGACAACACGCGTTTACGCGTAGCTATGCAGAAATCCGGCCGTTTAAGTGATGACTCACGCGAATTg < 2:530773/143‑1 (MQ=255) aTCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATGCAGAAATCCGGCCGTTTAAGTGATGACTCACGCGAATTGc < 1:1105808/143‑1 (MQ=255) tctccTTCCGGTGCGTTTTTTATTGCGCGGTTGATACGGGTTCAGCCAGGTTTAAAGAGGTATAACAAAATGACAGACACCGCTAGGTTACCCATAGCTATGCAGAGAGCCGGCCGTTTAAGTGATGACTCACGCGCATTGCt < 2:846481/140‑1 (MQ=255) | ACAGAGACTTTTATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCCGGGGGCTTTTTTATTGCGCGGTTGATAACGGTTCAGACAGGTTTAAAGAGGAATAACAAAATGACAGACAACACTCGTTTACGCATAGCTATGCAGAAATCCGGCCGTTTAAGTGATGACTCACGCGAATTGCT > NC_000913/2089984‑2090265 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |