| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,560,321 | C→T | 5.8% | A22V (GCT→GTT) | yffL → | CPZ‑55 prophage; uncharacterized protein YffL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,560,321 | 0 | C | T | 5.8% | 201.7 / 2.6 | 71 | A22V (GCT→GTT) | yffL | CPZ‑55 prophage; uncharacterized protein YffL |
| Reads supporting (aligned to +/- strand): ref base C (29/37); new base T (2/2); total (31/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.46e-01 | |||||||||||
CGGCTTTTCTTTTTCGCTAATTATTCCATTATTCCAATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAATTTTTAAACAAAATTAACGAGTTACGGAATAAAGC > NC_000913/2560180‑2560456 | cGGCTTTTCTTTTTCGCTAATTATTCCATTATTCCAATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAAtgct < 1:165710/143‑1 (MQ=255) gCTTTTCTTTTTCGCTAATTATTCCATTATTCCAATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAAtgttgc < 2:858655/143‑1 (MQ=255) gCTTTTCTTTTTCGCTAATTATTCCATTATTCCAATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAAtgctgc < 1:103503/143‑1 (MQ=255) cttttcttttTCGCTAATTATTCCATTATTCCAATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCa > 1:899271/1‑143 (MQ=255) ttttcttttcCGCTAATTATTCCATTATTCCAATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCaa < 1:917462/143‑1 (MQ=255) ttttcttttTCGCTAATTATTCCATTATTCCAATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCACCGAAACATCCAGCGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGCAAcgccccaa > 2:436908/1‑138 (MQ=255) ttttcttttTCGCTAATTATTCCATTATTCCAATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCaa > 2:350595/1‑143 (MQ=255) tttgcttctTCGCTAATTATTCCATTATTCCAATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCaa < 2:1045911/143‑1 (MQ=255) ttccttttTCGCTAATTATTCCATTATTCCAATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAAc < 1:956584/140‑1 (MQ=255) tcttttTCGCTAATTATTCCATTATTCAAATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACAt > 1:317157/1‑143 (MQ=255) tttttCGCTAATTATTCCATTATTCCAATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGc > 2:730663/1‑143 (MQ=255) ctacGCTAATTATTCCATTATTCCAATTAAGGGGAATAAATTA‑TCCATACTGGGAATCCTTTTTCGATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCg < 1:510174/140‑1 (MQ=255) tCGCTAATTATTCCATTATTCCAATTGAGTGGAATAAGTTGTTCAATAGCAATAA‑CTTAAATCCATGTCTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGCATGTTGCAGCATTCCggg < 1:249394/143‑1 (MQ=255) tCGCGAATTATTCCATTATTCCACTTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGAGCAACACAAATAAAAGCACCCGGAATGCTGCAACATGCCggg < 2:197241/143‑1 (MQ=255) cGCTACTAATTACAGTATTCCAATTAAGTGGAATAAATTATTCAATAGCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCgggg < 1:406198/143‑1 (MQ=255) cGCTAATTATTCCATTATTCTAATTAAGTGGAATAAATTAGTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGCATGTTGCAGCATTCCgggg < 1:1011840/143‑1 (MQ=255) cTAATTATTCCATTATTCCAATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGc > 1:201558/1‑143 (MQ=255) gtgagtccagtgttccaAGTACGTGGTATAAAGTAGTCACGAGCAAGAA‑CTGAAGTCCGGGTTTGCAACGAAAGATCCAGAGGTCGAAAAGAGGATCAACACAAATAAAAGCCGCCGGAATGGTGCAACATGCCGGGGGCGGt < 2:68884/138‑1 (MQ=255) attattccattattccAATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGt > 1:289443/1‑143 (MQ=255) tattccattattccaATTAAGTGCAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCCACATGCCGGGGGCGGTAt < 1:319026/143‑1 (MQ=255) tattccattatcgcaATTACGGAGAATAAATTATTCAATATCAAGAA‑CTGAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTAt < 1:919151/143‑1 (MQ=255) ttccattattccaATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTGTga < 2:965471/143‑1 (MQ=255) ttccattattccaATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATga < 1:325831/143‑1 (MQ=255) tccattattccaATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAATCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATgag > 1:1010260/1‑143 (MQ=255) tccattagtccaATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATgag < 1:970216/143‑1 (MQ=255) cattattccaATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGaa < 2:261705/143‑1 (MQ=255) tccaATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAACTAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGc < 1:773256/143‑1 (MQ=255) ccaATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCt < 2:500964/143‑1 (MQ=255) atcacgTGGAATACACTACTCAACACCAAGAA‑CCCAAAGCCCTGTTTCCAACGAAAGATCCAGAGTTCCAAAATAGGATCAACACACATAACAGCCCCCGGAATGCTGCCACATGCCGGGTGCGGTATGAGAAACAAGCTaaa < 1:526740/138‑1 (MQ=255) ttAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGGCCGATCCACAACTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAg < 1:806859/143‑1 (MQ=255) gTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATg > 1:172328/1‑124 (MQ=255) gTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATg < 2:172328/124‑1 (MQ=255) gTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCACCCGGAAAGCTGCAACATGCCGGGGGCGGCATGACAAACAAGCCAAAGgaga > 2:232997/1‑143 (MQ=255) aaTAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGCTATGAGAAACAAGCTAAAGGAGAAttt > 1:457335/1‑143 (MQ=255) acttatgCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCa < 2:109893/141‑1 (MQ=255) tgtatgCAATAGCAAGAA‑CTTAAATCCACGTTTGCAACGAACGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCAt < 2:272397/141‑1 (MQ=255) attCAATATCAAGAA‑CTTAAATCCCTCATCGCAACGAAAGATCCAGAGTTCGATAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTc < 1:748086/143‑1 (MQ=255) attCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTc < 1:72300/143‑1 (MQ=255) ttCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCt < 1:267010/143‑1 (MQ=255) tcaagatcaagaA‑CTTAAATCCACGTTTGCAACGAAAGATCCAGAGTTCGAAAAGAGGATCAACACAAATAAAAGACCCCCGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTg < 1:445528/143‑1 (MQ=255) tCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAGTGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTg > 2:545262/1‑143 (MQ=255) atatCAAGAA‑CTTAAAGCCCTGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGata < 1:950128/143‑1 (MQ=255) tCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGATATGAGCAACAAGCTAACGGAGAATTTCTCATGCCGGATATGc > 2:928741/1‑143 (MQ=255) tCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATAAACACAAATAAAACCCCCCGGAATGCTGCAACATGGCGGGGGCGCGAACAGAAACCCGCCAAACGCGAGTGTCTCATGGCTGctactc > 1:1093147/1‑140 (MQ=255) aaGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTa > 2:812417/1‑143 (MQ=255) aaGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTa > 2:781511/1‑143 (MQ=255) aGAT‑CTTACATCCATGTTCGCAACGAAAGCTCCAGAGTTCTAAAATAGGATCAACACCAATAAAAGCGCCCGGAATGCTGCGACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAg < 2:186008/143‑1 (MQ=255) aGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAg > 1:766109/1‑143 (MQ=255) aGAA‑CTGAAATCCATGGTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAAGAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAg < 1:445322/143‑1 (MQ=255) ttAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTCGCAGTa > 1:640913/1‑143 (MQ=255) ttAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAACTTCTCATGTCTGAAATGCTAGCAGTa > 1:205334/1‑143 (MQ=255) tAAATCCATGTTTGCAGCGAAAGATCCAGAGTTGGAAAATAGAATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAg < 2:906606/143‑1 (MQ=255) aaTCGATGTTGGCAAGAAAAGATCGAGAGTTAGAGAATAGGATAAATACGAATAAAAGACCCCGGAATGCTGCAACATGCCGGGGGCGTTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATAGGCTAGCAGTAGaa < 2:748039/143‑1 (MQ=255) aaTCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGaa > 1:763474/1‑143 (MQ=255) aTGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGa < 1:737925/143‑1 (MQ=255) gTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGaaa < 2:341048/143‑1 (MQ=255) aaCGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAaacaaaca > 1:902431/1‑143 (MQ=255) aaCGAAAGAACCAGAGTCCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAaacaaaca < 1:299308/143‑1 (MQ=255) gAAAGATCCAGAGTTCGAAAATAGGATCAAAACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGAGCAGTATGAGAAACAAACTAAAAGAGAATTTCTCATGTCTGATATGATAACAACAGAAAAAGAAACAAACAatg > 2:893308/1‑143 (MQ=255) ccAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGaaacaa > 2:535512/1‑130 (MQ=255) ccAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGaaacaa < 1:535512/130‑1 (MQ=255) ttCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAAtt > 2:173629/1‑143 (MQ=255) aTCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAATTTTTAAACAAAAt > 1:518596/1‑143 (MQ=255) acacAGATAAAAGCCCCCGGAAGGCTGCAAGATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAATTTTTAAACAAAATTAAc < 2:436871/143‑1 (MQ=255) acacAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAATTTTTAAACAAAATTAAc > 1:893920/1‑143 (MQ=255) acaAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAGTTCTCGCACAAAATTAACgc > 1:952891/1‑142 (MQ=255) aaaTAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAATTTTTAAACAAAATTAACGAGt > 1:876634/1‑143 (MQ=255) tAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGAGATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAATTTTTAAACAAAATTAACGAGTTAc < 1:545262/143‑1 (MQ=255) accgCCCCCGGCATGTTGCAGCATTCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAATTTTTAAACAAAATTAACGAGTTACgg > 1:781044/4‑143 (MQ=255) cgccGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGAAATGATAGGAGTAGAACAAGAAACAAACAATGATGTTCGTCAATTTTTAAACAAAATTAACGAGTTACGGAATaa < 2:727314/141‑1 (MQ=255) ccccGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAATTTTTAAACAAAATTAACGAGTTACGGAATaa > 2:223086/1‑143 (MQ=255) cccGGCATGTTGCAGCATTCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAATTTTTAAACAAAATTAACGAGTTACGGAATcaa > 2:344887/1‑143 (MQ=255) cccGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAATTTTTAAACAAAATTAACGAGTTACGGAATaaa < 2:895294/143‑1 (MQ=255) ccGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCCCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAATTTCTAAACAAAATTAACGAGTTACAGAATAAAg > 1:976437/1‑143 (MQ=255) cGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAATTTTTAAACAAAATTAACGAGTTACGGAATAAAGc < 1:355865/143‑1 (MQ=255) | CGGCTTTTCTTTTTCGCTAATTATTCCATTATTCCAATTAAGTGGAATAAATTATTCAATATCAAGAA‑CTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAATTTTTAAACAAAATTAACGAGTTACGGAATAAAGC > NC_000913/2560180‑2560456 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |