| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,399,711 | Δ123 bp | coding (333‑455/2727 nt) | nuoG ← | NADH:quinone oxidoreductase subunit G |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2399711 | 2399833 | 123 | 42 [0] | [0] 40 | nuoG | NADH:quinone oxidoreductase subunit G |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2399710 | 0 (0.000) | 40 (0.950) | 34/278 | 0.2 | 100% | coding (456/2727 nt) | nuoG | NADH:quinone oxidoreductase subunit G |
| ? | NC_000913 | 2399834 = | 0 (0.000) | coding (332/2727 nt) | nuoG | NADH:quinone oxidoreductase subunit G | |||||
TTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2399568‑2399710‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTCGCTTCTTCGTCGTCAATGGAAATAAAGGTGCCATCGGAAGCCGGTGTCATACA > NC_000913/2399834‑2399967 TTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCCGCGGAATCCTTGTAGTAACGCACACAGCGGGCGCAGGCG > 2:740892/1‑143TTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCG > 2:17671/1‑143 TTCGACCAGCTTACCGGAAAATTCGCTTTCCAGCGGGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGT < 2:445710/143‑1 GACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTAC < 1:421009/143‑1 AGGTTAGCGGAAGTCTCGCTTTGCAGGGTGCCGTCTTCCGGGCGACCGGAGTCGGCGTTGGCGTGCGCGCCGGAAACGCCCAGAGCTGTCCCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCC < 2:691770/143‑1 GTTGCCGGAAATGTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAGACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCT < 1:734245/143‑1 GTTACGGGAACCTTCGCTTTCCAGCCTGCCGTCTCCCGGGCGCCCGAAGTAGCCGTTGGCGTGCGCACCGTAAGCGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCT < 2:326727/143‑1 GTTACCGGAAACTGCGTTTTCCAGCGGGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCT < 1:286081/143‑1 CGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCTCTTCA > 1:639027/1‑143 GGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCTCTTCAC > 2:681299/1‑143 GAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACCGCGGTAGCAGGCGTTACCGCCCTCTTCACA > 1:126661/1‑143 TTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTCGTAACGCCCACAGCGGTAGCAGGCGTTACCGCCCTCTTCACATCCCG > 1:87545/1‑143 TTCGCTTCCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCCGTAGCAGGCGTTACCGCCCTCTTCACATACCG < 1:167036/143‑1 CTTTCCAGCCGGCCGTCTGCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCATAATCTGGGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCTCTTCACATACCGGACA < 1:701142/143‑1 CAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCTCTTCACATACCGGACAGTCGT < 2:156061/143‑1 GCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCTCTTCACATACCGGACAGTCGTGC < 1:768024/143‑1 tgaCGTCGTCCGGGCGACCGAAGTAGACGTGGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGGCAGCGTAATCTGTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCTCGTCACATACCGGACAGTCGTGCGGG < 1:589593/140‑1 TCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCCCTTCACACACCGGACAGTCGTGCCGGGGGTTGGg > 2:146605/1‑142 GGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAGACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGCTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCAT < 1:47664/143‑1 GGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCAT < 1:354639/143‑1 gAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTATCGCACACAGCGGTAGCAGGCGTTCCCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTC < 1:663795/142‑1 AAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGATGACCAACCACcc < 1:681299/143‑3 GTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCTCTTCACATACCGGACAGTCGTGAGGGTGGTTGGTCATCAACCACTCGA > 1:15813/1‑143 TGCGCGCGGTAGACGCCCAGATCTGTACCGTGAGCGTAGTCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACG < 2:425565/143‑1 ACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGACCT > 1:281707/1‑143 TAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCGTCAACCACTCGACCACGCTTTCACGGAACTGTTT > 1:209214/1‑143 gaagGCCCCGGTCTGTTCGGTGAGCGTAATCTTTGTAGTAGCGCACACGGCGGTGGCAGGCGTGACCGCGCTGTTCACATTCCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTC < 2:523814/139‑1 cCGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTCGC < 1:534256/142‑1 CCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTCGCTTCT > 1:558414/1‑143 CCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCTCTTCAAATACCGGACAGTCGTGCGGGTGGTTGGTCATCACCCACTCGACCACGCTTTCACGGCACTGTTTCGCTTCT > 2:275476/1‑143 AGATCTGTACCGTCAGTGTAGTCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTCGCTTCTTC < 1:650118/143‑1 GATCGGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTCGCTTCTTCG < 2:224283/143‑1 tggACCGTCAGCGGAATCTTTTGAGTACCGCACACAGCGGTGGCGGGCGTTACCGCCCTCGTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTCGCTTCTTCGTCGT < 2:574216/140‑1 CCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTCGCTTCTTCGTCGTCAAT < 2:15813/143‑1 AGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACCCGACCACGCTTTCACGGAACTGTTTCGCCTCTTCCTCCTCCATGGCAA > 2:281048/1‑143 CGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTCGCTTCTTCGTCGTCAATGGAAATA > 1:523901/1‑143 ctCGCACACAGCGGCCGCAGGCGTCACCGCACTCTTCACATACCGGGCAGTCGTGCGGGTGGGTGGTCGTCAACCACTCGACCACGCTTTCACGGAACTGTTTCGCTTCTTCGTCGTCAATGGAAATAAAGGTGCCATCGGAA < 1:390502/141‑1 ACAGCGGTAGCAGGCGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGGTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGGTTCGCTTCTTCGTCGTCAATGACAAGCAAGGTGACACCGGACGCCGGTG > 2:638597/1‑143 ACAGCGGTAGCAGGCGTTACCGCCCTCTTCACATACCGCACAGTCGTGCGGGTGGTTGGTCATCAACCACCCGACCACGCTTTCCCGGAACTGTTTCGCTTCTTCGTCGTCACTGGACCTCAAGGTGCCATCGGAAGCCGGTG > 2:107748/1‑143 GCGGTAGCAGGCGTTACCGCCCTCTTCACATACCGGACAGGCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTCGCTTCTTCGTCGTCAATGGAAATAAAGGTGCCATCGGAAGCCGGTGTCA < 2:639027/143‑1 GGTAGCTGGCGTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTCGCTTCTTCGTCGTCAATGGAAATAAAGGTGCCATCGGAAGCCGGTGTCATA < 2:185675/143‑1 TAGCAGGCGGTACCGCCCTCCTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTCGCTTCTTCGTCGTCAATGGAAATAAAGGTGCCATCGGAAGCCGGTGTCATACA < 1:17671/143‑1 TTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTAGTAACGCACACAGCGGTAGCAGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2399568‑2399710‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gTTACCGCCCTCTTCACATACCGGACAGTCGTGCGGGTGGTTGGTCATCAACCACTCGACCACGCTTTCACGGAACTGTTTCGCTTCTTCGTCGTCAATGGAAATAAAGGTGCCATCGGAAGCCGGTGTCATACA > NC_000913/2399834‑2399967 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |