New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 315892 =NA (NA)6 (0.150) 5/258 NT NA noncoding (664/1255 nt) IS3 repeat region
?NC_000913 315923 = NA (NA)noncoding (695/1255 nt) IS3 repeat region

Only 100 of 168 total aligned reads displayed.

CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/316036‑315892
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTA  >  NC_000913/315923‑316064
                                                                                                                                                                                                                                                                                               
cagTGCCATATCCAGCCAGCCTTCTTCTGTACGGAAGCACGTGATGCCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  <  1:407348/140‑1
CACTGCCCGAGACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCGGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  <  2:640303/143‑1
CACTGCCAGTTACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAACTCCTGCTCCAACAGCTTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  <  2:404482/143‑1
CACTGCCAGCTATAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  <  2:265193/143‑1
CACTGCCAGATACTGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  <  2:27411/143‑1
CACTGCCAGATACGGCCGGCCTTCATCTGTACGTAAGTACGTGATGCCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  <  2:732807/143‑1
CACTGCCAGATACAGCCAGCCTTCATCTGTCCGTCCGTCCGTGATGGCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  >  1:777169/1‑143
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAACACTCCTGCTCCAACAGACTTGCTGACACAGGCAGCCCGTGTGCGCGGCAGCTGCCCGGGC                                                                                                                                                  >  2:94508/1‑143
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCCACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  >  2:366123/1‑143
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAGCAGATTTTCTGACACATGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  >  1:47271/1‑143
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGGCGTGTGCGCGGTCGCTGACCGGGC                                                                                                                                                  >  1:195354/1‑143
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  >  1:352927/1‑143
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  >  1:101670/1‑143
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  <  1:455711/143‑1
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  >  1:506452/1‑143
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  <  1:626161/143‑1
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  >  1:816515/1‑143
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  >  2:212791/1‑143
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  >  1:101215/1‑143
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  <  1:102032/143‑1
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  >  1:308690/1‑143
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGGGCGCGCGGGAGCTCACCGGGC                                                                                                                                                  >  2:257353/1‑143
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCACGCCGTGTGCGAGGTAGCTGGCAGGGC                                                                                                                                                  >  1:215780/1‑143
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCGCCAACAGATTTTCTGACACAGGAACGCCGCGACCACGGTAGCTGGCCCGGC                                                                                                                                                  >  2:59067/1‑143
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTCCTCCAACAGACTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  >  2:237969/1‑143
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGGTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGGTGACCGGGC                                                                                                                                                  >  1:175944/1‑143
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCGGGTGCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  <  1:232717/143‑1
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCACACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGACAGGCCGTGTGCGCGGTAGCTGCCCGGGC                                                                                                                                                  >  1:447222/1‑143
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGAACGTGATGTCTCCTTCCCGCTTCTGGTTCGGGCCACTGGCGTATAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGGCGGGGC                                                                                                                                                  >  1:364674/1‑143
CACTGCCAGATACAGCCAGCCTTCATCTGGACGTAAGTACGTGACGACACGTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  <  1:462486/143‑1
CACTGCCAGATACAGCCAGCCTTCAGCTGTACGTGAGCACGTGATGCCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  <  2:263812/143‑1
CACTCCCAGATACAGCCAGCCCACATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGC                                                                                                                                                  <  1:643173/143‑1
 cCTGCCAGATACAGCCAGCCTCCATCTGTCCGTAAGCACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCCCTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCT                                                                                                                                                 <  1:437126/142‑1
 cCTGCCAGAGACAGCCGGCCTTCATCTGTACGTAAGTTCGTGATGTCTCCTTCCCACTTCTGGGTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCT                                                                                                                                                 <  2:106983/142‑1
 ACTGCGAGATAGAGCCGGCCTTCATCTGGACGTAAGTACGTGATGTCTCCTGCCCACTGCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCT                                                                                                                                                 <  2:224042/143‑1
 ACTGCCGGATACGGCCAGCCTTCGTCTGTGCGTAAGTACGTGATGTCTCCTGCCCACTTCTGGGTCGGGCCACTGGCGTAAAAATGCTGCTCCCACAGAGTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCT                                                                                                                                                 <  2:189506/143‑1
 ACTGCCAGATACAGCTAGCCTTCATCTGTACGTAAGTTCGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCT                                                                                                                                                 <  2:394299/143‑1
 ACTGCCAGATACAGCCAGGCTCCCCCTTTACTTTTGTTGGTGCCGCCACCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCT                                                                                                                                                 <  1:807043/143‑1
 ACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCTACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCT                                                                                                                                                 <  1:713081/143‑1
 ACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCAGTGGCGTGCAAATGCTGCTCCTACCGATTTTCTGACACAGGCAGGCCGGCTGCGCGCTGGCGGACCGGGCg                                                                                                                                                 >  1:367697/1‑142
 ACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCT                                                                                                                                                 <  1:13867/143‑1
 ACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCT                                                                                                                                                 <  1:430049/143‑1
 ACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCT                                                                                                                                                 >  1:719848/1‑143
 ACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTATGCGCGGTAGCTGAGCGGGCT                                                                                                                                                 >  1:127586/1‑143
 ACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGGGATGTCTCCTGCCCACTGCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGTAGGCCGTGTGCGCGGTAGCTGACCGGGCT                                                                                                                                                 <  2:329393/143‑1
 ACTGCCAGATACAGCCAGCCTTCAGCTGTACGTAAGTACGTGATGTCTGCTGTCCACGTCTGGTTCGGGCCACTGGCGTAAAAAGCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCT                                                                                                                                                 <  1:592628/143‑1
 ACTGCCAGATACAGCCAGCCGTCATGTGTACGTACGTCAGAAAACTCGCCTTCCCACTTCTGGGTCGGGACACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCT                                                                                                                                                 <  1:590775/143‑1
 ACTGCCAGATACAGCCAGCCGTCAGCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAAGCCTGCTGCGACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCT                                                                                                                                                 <  2:175297/143‑1
  cgtCCAGTTACAGCCAGCCTTCATGTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAGCAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTG                                                                                                                                                <  2:269042/140‑1
  CTGCCTGCTCCAGCCTGCCTGCATTTGTCCGTACGTATGTGATGTCTCCTGCCCACTTCTTGTTTGGGCCACTGGCTTAAAAATCTTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTG                                                                                                                                                <  2:682246/143‑1
  CTGCCAGATACCGCCAGCCTTCGTCTGTACGTAAGGACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTG                                                                                                                                                <  1:227980/143‑1
  CTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGCCACAGGCAGGCCGTGTGCGCCGTAGCTGACCGCGCTG                                                                                                                                                >  1:348897/1‑143
  CTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTG                                                                                                                                                <  1:730652/143‑1
  CTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTG                                                                                                                                                <  2:725547/143‑1
   TGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCTACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGCAGCTGACCGGGCTGg                                                                                                                                               >  1:723529/1‑142
   TGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGCCACAGGCAGGCCGTGTGCGCGGTAGCTGGCCGGGCTGg                                                                                                                                               >  1:714397/1‑142
   TGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACCCAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGg                                                                                                                                               >  1:275151/1‑142
   TGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGg                                                                                                                                               >  2:660514/1‑142
   TGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCCGACCGCGCTGC                                                                                                                                               >  1:135916/1‑143
   TGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGCATCCGCGGCAGCTAACCAGGCTca                                                                                                                                               >  2:652235/1‑141
     CCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACCCAGGCAGGCCGTGTGCGCGGTAGCTGACAGGGCTGCac                                                                                                                                             >  2:454892/1‑141
     CCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGgac                                                                                                                                             >  1:6968/1‑140
     CCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGGGCGCGGTAGCTGACCGGGCggagc                                                                                                                                             >  2:763567/1‑138
     CCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGCGCCACTGTCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTCACCGCGCTcaac                                                                                                                                             >  2:133996/1‑139
     CCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTCATGTCTCCTGCCCACTTCTGCTTCGGGCCACTGGCGTAAAAATCCTGCTACAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCCGTAGCTGACCAGGCaaaac                                                                                                                                             >  1:442943/1‑138
      CAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCcgacct                                                                                                                                            >  2:295553/1‑137
                                                                                                             ACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCGCGTCCTTACGGACAGACGAAGGCAGGCTGTATgt                                     >  2:301077/1‑141
                                                                                                               AGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGG                                   >  1:752372/1‑143
                                                                                                                                       ataCGGGCTGCCTGTGTCAGAAAATTTGTTGGAGCAGGATTTTTAGGCCAGTGGCCCGAACCAGAAGTGGGCAGGTGATATCACGTACTTACGTACAGATGAAGGTTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCAC           <  2:46606/140‑1
                                                                                                                                            gcgTGCCTGTGTCAGAATATCTGTGGGGGCTGGATTTTTACTCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCC      <  2:4329/140‑1
                                                                                                                                            gcgTGCCGGTGGCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCC      <  2:775405/140‑1
                                                                                                                                            gccgGCCTGTGTCAGAAAATCGGTTGGAGCAGGATTTGTACGCCAGTGGCCCGAACGAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCC      <  1:763926/139‑1
                                                                                                                                            gccgGCCGGTGGCAGAAGGTCTGTTGGAGCAGGAGTTTTCCGCCAGTGGCCCGCGCCAGAAGTGGGCAGGAGACATCACGTACGTACGTACAGATGAAGGCGGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCC      <  2:303183/139‑1
                                                                                                                                            gcccGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCC      <  1:350622/139‑1
                                                                                                                                            GGCTGCCTGTGTCAGAAAAGCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCC      <  1:605895/143‑1
                                                                                                                                             ccgGCCTGTGTGAGAAAGTCTGTTGGAGCAGGATTTGTACGCCAGGGGCCCGAACCAGAAGTGGGCAGCGGACATCACGCACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCG     <  2:206469/140‑1
                                                                                                                                              CTGCCTGTGTCAGGAAATGTGTTGGCGCAGGATTTTTACGCCAGTGGCCCGAAGCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGT    <  2:501051/143‑1
                                                                                                                                              CTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAGCCAGAAGTGGGCGGGAGACGTCACGTACTTACGTACAGATGAAGGCTGGCGGTATCTGGAAGTGGTCATTGACCTGTGGTCACGTGACGT    >  2:62467/1‑143
                                                                                                                                              CTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACGAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATCAAGGCTGGCTGTATCTGGCCGTGGGCATGGACCCGTGGTCACGTGCCGc    >  2:566369/1‑142
                                                                                                                                              CTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGT    >  1:88878/1‑143
                                                                                                                                              CTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGT    <  1:276448/143‑1
                                                                                                                                              CTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGT    >  1:246604/1‑143
                                                                                                                                              CTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGT    <  2:476549/143‑1
                                                                                                                                              CTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGT    <  1:285550/143‑1
                                                                                                                                              CTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGT    >  1:615396/1‑143
                                                                                                                                              CTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTCGTCATTGACCTGTGGTCAGCTGCCGc    >  2:224829/1‑142
                                                                                                                                              CTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTAGACATTGACCTGTGGTCACGTGCaat    >  1:708462/1‑140
                                                                                                                                              CTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGAGGTCATTGACCTGTGGTCACGTGCCGT    >  2:13557/1‑143
                                                                                                                                               gGCCTGTGTCAGAAAATCTGTTGGAGCAGGATGTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTAGTGATGAAGTCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTT   <  1:33023/142‑1
                                                                                                                                               TGCCTGTGTCAGACTATCTGTTGGGGCAGGATGTTTACGCCAGCGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTT   <  2:41073/143‑1
                                                                                                                                               TGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACCTCACGGACTGACGTACAGATGAAGGCTGGCTGTATCTGGCAGGGACCATTGACCTATAGTCACCTGCCGTT   >  2:619318/1‑143
                                                                                                                                               TGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCCCGTGCCGgt   >  2:42867/1‑141
                                                                                                                                               TGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTT   >  1:394752/1‑143
                                                                                                                                               TGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTT   >  1:739661/1‑143
                                                                                                                                               TGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTT   >  2:722806/1‑143
                                                                                                                                               TGCCTGTGGCAGAAAACGTGGTGGAGCAGGATTTTTACGCCAGTGGCCCGGATCCGAAGTGGGCAGGAGACCTCACCTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCATGTGCCGTT   <  2:754308/143‑1
                                                                                                                                                GCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACATATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTA  <  1:425115/143‑1
                                                                                                                                                GCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTA  <  1:707012/143‑1
                                                                                                                                                GCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTA  <  1:293030/143‑1
                                                                                                                                                GCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACATGTGGTCACGTGCCGTTA  >  2:557103/1‑143
                                                                                                                                                                                                                                                                                               
CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATGTCTCCTGCCCACTTCTGGTTCGGGCCACTGGCGTAAAAATCCTGCTCCAACAGATTTTCTGACACAGGCAGGCCGTGTGCGCGGTAGCTGACCGGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/316036‑315892
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTA  >  NC_000913/315923‑316064

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.