mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 17 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 572411 | 1280 (30.930) | 16 (0.410) | 9/250 | NT | 1.6% | coding (44/102 nt) | ylcH | DLP12 prophage; uncharacterized protein YlcH |
| ? | NC_000913 | = 572431 | 775 (19.790) | coding (64/102 nt) | ylcH | DLP12 prophage; uncharacterized protein YlcH | |||||
| * | ? | NC_000913 | 572405 = | 1418 (34.270) | 10 (0.320) +31 bp |
9/202 | NT | 0.92% | coding (38/102 nt) | ylcH | DLP12 prophage; uncharacterized protein YlcH |
| ? | NC_000913 | = 1095504 | NA (NA) | intergenic (‑67/‑40) | insE‑4/ymdE | IS3 element protein InsE/protein YmdE | |||||
| * | ? | NC_000913 | = 572325 | 2962 (71.580) | 31 (0.810) | 19/244 | NT | 1.1% | intergenic (+74/‑43) | ybcM/ylcH | DLP12 prophage; putative DNA‑binding transcriptional regulator/DLP12 prophage; uncharacterized protein YlcH |
| ? | NC_000913 | = 572334 | 2863 (74.900) | intergenic (+83/‑34) | ybcM/ylcH | DLP12 prophage; putative DNA‑binding transcriptional regulator/DLP12 prophage; uncharacterized protein YlcH | |||||
| * | ? | NC_000913 | = 571462 | 3609 (87.210) | 3 (0.080) | 3/250 | NT | 0.087% | coding (9/798 nt) | ybcM | DLP12 prophage; putative DNA‑binding transcriptional regulator |
| ? | NC_000913 | = 571538 | 3511 (89.630) | coding (85/798 nt) | ybcM | DLP12 prophage; putative DNA‑binding transcriptional regulator | |||||
| * | ? | NC_000913 | = 570701 | 2974 (71.870) | 44 (1.120) | 17/250 | NT | 1.5% | intergenic (+273/‑192) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL |
| ? | NC_000913 | = 570711 | 2832 (72.300) | intergenic (+283/‑182) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL | |||||
| * | ? | NC_000913 | 570695 = | 2965 (71.650) | 57 (1.460) | 24/250 | NT | 2.0% | intergenic (+267/‑198) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL |
| ? | NC_000913 | 570719 = | 2832 (72.300) | intergenic (+291/‑174) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL | |||||
| * | ? | NC_000913 | 570693 = | 2907 (70.250) | 3 (0.070) | 3/262 | NT | 0.10% | intergenic (+265/‑200) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL |
| ? | NC_000913 | 570721 = | 2917 (71.030) | intergenic (+293/‑172) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL | |||||
| * | ? | NC_000913 | 570627 = | 3305 (79.870) | 7 (0.190) | 4/238 | NT | 0.24% | intergenic (+199/‑266) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL |
| ? | NC_000913 | 570677 = | 2809 (75.360) | intergenic (+249/‑216) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL | |||||
| * | ? | NC_000913 | 570480 = | 3790 (91.590) | 3 (0.080) | 3/254 | NT | 0.083% | intergenic (+52/‑413) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL |
| ? | NC_000913 | 570506 = | 3554 (89.290) | intergenic (+78/‑387) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL | |||||
| * | ? | NC_000913 | 569768 = | 3723 (89.970) | 3 (0.080) | 3/248 | NT | 0.088% | coding (867/1527 nt) | ybcK | DLP12 prophage; putative recombinase |
| ? | NC_000913 | 569802 = | 3279 (84.390) | coding (901/1527 nt) | ybcK | DLP12 prophage; putative recombinase | |||||