New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	225078 =	NA (NA)	4 (0.130)	4/250	NT	NA	noncoding (1308/1542 nt)	rrsH	16S ribosomal RNA
	?	NC_000913	225100 =	NA (NA)					noncoding (1330/1542 nt)	rrsH	16S ribosomal RNA

TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/225226‑225078 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gactccaTGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTT  >  NC_000913/225100‑225241                                                                                                                                                                                                                                                                                                     TCCCGAAGGTTAAGCTACCTACTCCTTTTGCAACCCACTCCCATGGTGTGACGGGCGCTGTGTACACGGCCCGCGAACGCATTCACCGTGGCATTCTGATCCACGCTCACTAGCGATTCCCACTTCATGGCGTCGAGTTGCAG                                                                                                                                                      >  2:656184/1‑143  cccgggGGTTCAGCTACCGACTTCTTTTGCACCCCCCGCCCAGGGTGTGAGGGGCGGTGTGTACCAGGCCCGGGAACGTATTCACCGTGGCATTCTGAGCCGCGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGA                                                                                                                                                     <  2:216807/137‑1  CCCGAATGTTAAGCTACCTACTTCTTTTGCATCCCACTTCCATGGTGTGACGGTCGGTGTGTACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATCGAGTCGAGTTGCAGA                                                                                                                                                     <  2:558310/143‑1  CCCGAAGGTTAAGCTACCTGCTGCTTTGGCAACGCATTCCCATTGTGTGGCGGGCGGTGGGTACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCGCGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGA                                                                                                                                                     <  1:177482/143‑1  CCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGA                                                                                                                                                     >  1:77378/1‑143  CCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGA                                                                                                                                                     <  2:291336/143‑1  CCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGA                                                                                                                                                     <  2:265056/143‑1  CCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGA                                                                                                                                                     <  1:60344/143‑1  CCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGA                                                                                                                                                     <  1:499863/143‑1  CCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGA                                                                                                                                                     <  1:262262/143‑1   CCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGAC                                                                                                                                                    >  2:509694/1‑143    CGAAGGTTAAGCTACCTACTTCTTTTGCACCCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACT                                                                                                                                                   <  1:326102/143‑1    CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACT                                                                                                                                                   <  1:512123/143‑1    CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACT                                                                                                                                                   >  2:231764/1‑143     gcAGGTCAAGCTACCCGCTTCTTTTGCCACCCACTGCCGTGGTGTGACGGGCGGTGTGTACCACGCCCCGGCACGTATTCACCGTGGCATTCTGATCCACGACTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTC                                                                                                                                                  <  2:613433/141‑1     GAAGGTTAAGCTACCTACTTCTTCTGCAACCCACCCCCATGGCGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTC                                                                                                                                                  <  1:321155/143‑1     GAAGGTTAAGCTACCTACTGCTTTTGCAACCCACGCCCATGGTGGGACTGGCGGTGTGTACAAGGCCCGGGAACGTATTCACCGTTGCATTCTGATCCACGATTACTAGCGATTCCTACTTCATGGGGTCGAGTTGCAGACTC                                                                                                                                                  <  1:139712/143‑1      AAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTATTCACCGTGGCGTTCTGATCCACGATTACTAGCGATTCCGACTACATGGAGTCGCGCTACAGACTCC                                                                                                                                                 >  2:192699/1‑143                                                                                 ATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACGCACCGCC                                                                      >  1:264681/1‑143                                                                                                    TCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGT                                                                   <  1:394853/127‑1                                                                                                    TCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGT                                                                   >  2:394853/1‑127                                                                                                                               ATGGAGTCGAGTTGCAGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGCAGCACAACC                        >  2:9567/1‑143                                                                                                                                                acgCCATGAAGGCGGAATCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCAGGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTAC       <  2:645544/140‑1                                                                                                                                                  TCCATGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGCCACGGTGCATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGCGTGGGTTGCGCAAGGAGCAGGTAGCTTAACCCTCGGGAGGGCGCTTACCA     >  2:137136/1‑143                                                                                                                                                  TCCATGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCA     >  2:593636/1‑143                                                                                                                                                    CATGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGGGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGCGGGCGCTTACCACT   >  1:42779/1‑143                                                                                                                                                    CATGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCACAAGAAGTAGGTAGCTTACCCCTCGGGCGGGCGCTTACCACg   >  1:46857/1‑142                                                                                                                                                    CATGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACT   <  1:202718/143‑1                                                                                                                                                    CATGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGGGGGTTGAAAAAGAAGTAGGTCGCTTAGAGTTAGGGAGGGCGCTGACCACT   >  1:260677/1‑143                                                                                                                                                    CATGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCAAGTAAAGACAGCCCGTCACACCATGGGAGGGGGTTGCAAAAGAAGTAGGGAGCTTAACCTTCGGGAGGGCGCTTACCACT   >  1:592266/1‑143                                                                                                                                                     ATGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTCACCTGCGGGAGGGCGCTTACCACTc  >  2:429647/1‑142                                                                                                                                                                                                                                                                                                     TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACTCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/225226‑225078 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gactccaTGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTT  >  NC_000913/225100‑225241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.