New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 5691591913 (39.190)75 (1.670) 27/258 0.7 3.9% coding (258/1527 nt) ybcK DLP12 prophage; putative recombinase
?NC_000913 = 569161 1889 (42.000)coding (260/1527 nt) ybcK DLP12 prophage; putative recombinase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2714 total aligned reads displayed.

ATCTTGATACCATAACATATGAAGATTTAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCTTTGAATGAGCCATATTCATTAATAAAAG  >  NC_000913/569017‑569301
                                                                                                                                              |                                                                                                                                               
tggcttttattaatggatatggctcattcaaagagtcaatattatagactgtattgttgcaaagagttatcaaatcaataacgtgattcaaaatcaatttcagacgttcaatcgagtcacagactttatatcTTGAAAGTCTg                                                                                                                                                 <  2:887327‑M1/11‑1 (MQ=255)
tggcttttattaatgaatatggctcattcaaagagtcaatattatagactgtattgtcgcaaagagttataacatcaataccgtgattcaaaatcaatttcagacgttcaatcgcttcaccgactttttctcTTGAAAGTCTg                                                                                                                                                 <  2:290580‑M1/11‑1 (MQ=255)
 tCTTGATACCATAACATATGAAGATTTAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTgg                                                                                                                                                >  1:733764/1‑143 (MQ=255)
   ttGATACCATAACATATGAAGATTTAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGAc                                                                                                                                              <  1:513216‑M2/143‑2 (MQ=255)
    tGATACCATAAGATATGAAGATTTAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATTGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGAca                                                                                                                                             >  2:506661‑M2/1‑141 (MQ=255)
     ggtacCATAACATATGAAGATTTAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGGCGTTTTGGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGAcag                                                                                                                                            >  2:149828‑M2/3‑140 (MQ=255)
       tattaatgaatatggctcattcaaagagtcaatattatagactgtattgtcgcaaagagttataacatcaataccgtgattcaaaatcaatttcagacgttcaatcgcttcaccgactttttctcTTGAAAGTCTGGACAG‑Ac                                                                                                                                         >  2:902906‑M1/126‑143 (MQ=255)
          cATAACATATGAAGATTTAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGAcagacttt                                                                                                                                       <  1:466230‑M2/143‑9 (MQ=255)
           aTAACATATGAAGATTTAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGAcagactttc                                                                                                                                      >  2:854533‑M2/1‑134 (MQ=255)
           aTAACAAATGAAGATTTAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGATGTTATTATAGGCTATAGAGTATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTTTGGAcagactttc                                                                                                                                      >  2:108021‑M2/1‑134 (MQ=255)
             agaatatggctcattcaaagagtcaatattatagactgtattgtcgcaaagagttataacatcaataccgtgattcaaaatcaatttcagacgttcaatcgcttcaccgacgtttgctcTTGAAAGTCTGGACAG‑ACTTTCaa                                                                                                                                   >  2:642643‑M1/120‑143 (MQ=255)
             aaCATATGAAGATTTAGGCTTAACAGAGAGCAAACGACAGCATGCATAATTAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGAcagactttcaa                                                                                                                                    >  1:334600‑M2/1‑132 (MQ=255)
              aCATATGAAGATTTAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTGCATTGGTAGTTGAAAGGCTGGAcggactttaaag                                                                                                                                   <  2:464582‑M2/143‑13 (MQ=255)
              aCAGATGAAGATTTAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAag                                                                                                                                  <  1:81093/143‑1 (MQ=255)
                  atGAAGATTTAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGaa                                                                                                                              >  2:253420/1‑143 (MQ=255)
                   tGAAGATTTAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGaaa                                                                                                                             >  2:239799/1‑143 (MQ=255)
                   tGAAGATTTAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGaaa                                                                                                                             >  1:416802/1‑143 (MQ=255)
                    gAAGATTTAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGCAAGTCTGGATAG‑ACGGGCAAGAGaaaa                                                                                                                            >  2:777111/1‑143 (MQ=255)
                    gAAGATTTAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGaaaa                                                                                                                            >  2:659773/1‑143 (MQ=255)
                    gAAGATTTAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCAGGGTTATATATTGCCAGGAACTAAATTGTACGTAGAAAGTGTGG‑CAGCACAGTCAAGAGaaaa                                                                                                                            >  2:536072/1‑143 (MQ=255)
                     aaGATTTAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGaaaaa                                                                                                                           <  2:735906/143‑1 (MQ=255)
                      aGATTTATGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGaaaaaa                                                                                                                          >  1:666927/1‑142 (MQ=255)
                       tcattcaaagagtcaatattatagactgtattgtcgcaaagagttataacatcaataccgtgattcaaaatcaatttcagacgttcaatcgcttcaccgactttttctcTTGAAAGTCTGGACAG‑ACTTTCaa                                                                                                                                   >  2:474864‑M1/110‑133 (MQ=255)
                         tttAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCg                                                                                                                       <  1:293032/143‑1 (MQ=255)
                          ttAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATCTTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCgg                                                                                                                      >  2:438451/1‑143 (MQ=255)
                              gATTAAGTGCATTCGAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGaa                                                                                                                  <  2:164762/143‑1 (MQ=255)
                                    gTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGAtt                                                                                                            <  1:432684/143‑1 (MQ=255)
                                        aTTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGCTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAAc                                                                                                        <  1:453278/143‑1 (MQ=255)
                                         ttCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACg                                                                                                       >  2:809017/1‑143 (MQ=255)
                                          tCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGCTTGAACGt                                                                                                      >  2:379719/1‑143 (MQ=255)
                                            acaGGAGAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCt                                                                                                    >  2:842786/3‑143 (MQ=255)
                                             aaGGAAAGCAGGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATAGTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTg                                                                                                   <  2:629783/143‑1 (MQ=255)
                                              atgAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGa                                                                                                  <  1:791978/141‑1 (MQ=255)
                                              aGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAAAGTCAGa                                                                                                  >  2:307448/1‑143 (MQ=255)
                                              aGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGGTGAGAGTCTGGACAG‑ACTTTCAAGAGAAAACGTCGGTGAAGCGATTGAACGTCTGa                                                                                                  >  2:455246/1‑143 (MQ=255)
                                               ggAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCAGGACAG‑ACTTTCGGGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGaa                                                                                                 >  1:563226/1‑143 (MQ=255)
                                                gAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGaaa                                                                                                >  1:505042/1‑143 (MQ=255)
                                                gAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGaaa                                                                                                >  2:351260/1‑143 (MQ=255)
                                                gAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGaaa                                                                                                <  1:609490/143‑1 (MQ=255)
                                                 aaaGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAAt                                                                                               <  1:380929/143‑1 (MQ=255)
                                                     cATGCACAATCAGGATCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGAt                                                                                           <  1:873367/143‑1 (MQ=255)
                                                     cATGCACAATCAGGAGCTTTTTCGGAATTTTTGGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGAt                                                                                           <  1:351873/143‑1 (MQ=255)
                                                     cATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGAt                                                                                           >  2:366237/1‑143 (MQ=255)
                                                       tGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTACCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCCATTGAACGTCTGCAATTGAttt                                                                                         >  2:183844/1‑143 (MQ=255)
                                                          acaATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGa                                                                                      >  1:530502/1‑143 (MQ=255)
                                                           caATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGaa                                                                                     >  1:397070/1‑143 (MQ=255)
                                                              tCATGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACGTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCa                                                                                  <  2:491615/143‑1 (MQ=255)
                                                                aGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACg                                                                                >  1:138519/1‑143 (MQ=255)
                                                                    gCTTTTTCTGATTTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTAAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTAt                                                                            <  2:336107/143‑1 (MQ=255)
                                                                    gCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGTCAGGAACTACATTGTTAGTTGAAAGTCTGTACAG‑ACTTTCAAGAGAAAAATTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTAt                                                                            <  2:212770/143‑1 (MQ=255)
                                                                     cTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTAtt                                                                           >  1:764915/1‑143 (MQ=255)
                                                                      tttttCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTg                                                                          >  2:824232/1‑143 (MQ=255)
                                                                      tttttCGGAATTTTTAGATGCTATAGAGCATGGCTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGCAAAAGTCGGTGAAGCGACTGAACGTCTGCAGTTCACTTTCAATCACCGTATTg                                                                          >  2:269833/1‑143 (MQ=255)
                                                                        tttCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGAt                                                                        >  1:779668/1‑143 (MQ=255)
                                                                        tttCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGAt                                                                        <  1:310290/143‑1 (MQ=255)
                                                                        tttCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGAt                                                                        <  1:745513/143‑1 (MQ=255)
                                                                        tttCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATAGAt                                                                        >  2:128672/1‑143 (MQ=255)
                                                                        tttCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGAACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGTACGACTGAAATTGATTTTGAATCAGGGAATTGAt                                                                        >  2:226563/1‑143 (MQ=255)
                                                                        tttCGGAATTTGTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGAt                                                                        <  2:70638/143‑1 (MQ=255)
                                                                           cGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGtt                                                                     >  1:893671/1‑143 (MQ=255)
                                                                            ggAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTta                                                                    >  1:646173/1‑143 (MQ=255)
                                                                             gAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTtat                                                                   >  1:194896/1‑143 (MQ=255)
                                                                                   ttAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAActct                                                             >  2:523999/1‑143 (MQ=255)
                                                                                     aGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCttt                                                           <  1:828137/143‑1 (MQ=255)
                                                                                      gATGCTATAGAGCCTTGTTATATATTTCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAACGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTg                                                          <  2:393501/143‑1 (MQ=255)
                                                                                       aggCTATAGAGCATTGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGc                                                         <  2:761087/141‑1 (MQ=255)
                                                                                           tataGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGCATTGATGTTATAACTCTTTGCGAcc                                                     >  1:716868/1‑142 (MQ=255)
                                                                                            ataGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGGTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTATGAATAACGGTAGTGATGTTATAACTATTTGCGACaa                                                    >  2:69581/1‑143 (MQ=255)
                                                                                                agCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAGAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGAATTGATGTTATAACTCTTTGCGACAATACa                                                >  2:321505/1‑143 (MQ=255)
                                                                                                  cATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGt                                              >  1:684337/1‑143 (MQ=255)
                                                                                                       ttATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCtata                                         >  1:214071/1‑143 (MQ=255)
                                                                                                           agatcgCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAatat                                     <  2:200414/138‑1 (MQ=255)
                                                                                                             atTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTg                                   >  1:179860/1‑143 (MQ=255)
                                                                                                                   aGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCtt                             >  1:367287/1‑143 (MQ=255)
                                                                                                                   aGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCtt                             >  1:255468/1‑143 (MQ=255)
                                                                                                                   aGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCtt                             >  2:610434/1‑143 (MQ=255)
                                                                                                                      aaCTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAGTACAGTCTATAATCTTGACGCTTTGa                          >  2:723767/1‑143 (MQ=255)
                                                                                                                        cTAGATTGTTAGTTGAAAGTCTGGACAG‑ACGTTGAAGGGAAAAAGTCGGGGAAGCGATTGCACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCTTTGAAt                        <  2:553450/143‑1 (MQ=255)
                                                                                                                         tACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCTTTGAATg                       >  2:679383/1‑143 (MQ=255)
                                                                                                                           cATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCTTTGAATGAg                     <  1:596699/143‑1 (MQ=255)
                                                                                                                               gTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATGACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCTTTGAATGAGCCat                 >  1:230099/1‑143 (MQ=255)
                                                                                                                                 tAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCGTTGAATGAGCCagat               >  2:869619/1‑143 (MQ=255)
                                                                                                                                   gTTGAAAGCCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCTTTGAATGAGCCATATTc             <  1:100764/143‑1 (MQ=255)
                                                                                                                                    ttGAAAGTCTGtccagactttcaactaacaatgtagttcctggcaatatataaccatgctctatagcatctaaaaattccgaaaaagctcctgattgtgcatgctttcctttgaatgcacttaatcctaaatcttcatatgtt             >  2:592894‑M1/1‑11 (MQ=255)
                                                                                                                                    ttGAAAGTCTGtccagactttcaactaacaatgtagttcctggcaatatataaccatgctctatagcatctaaaaattccgaaaaagctcctgattgtgcatgctttcctttgaatgcacttaatcctaaatcttcatatgtt             >  1:708086‑M1/1‑11 (MQ=255)
                                                                                                                                    ttGAAAGTCTGGAcagactttcaactaacaatgtagttcctggcaatatataaccatgctctatagcatctaaaaattccgaaaaagctcctgattgtgcatgctttcctttgaatgcacttaatcctaaatcttcatatgtt             <  1:630355‑M2/143‑131 (MQ=255)
                                                                                                                                    TTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACa                                                <  2:419843‑M1/107‑1 (MQ=255)
                                                                                                                                    TTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCTTTGAATGAGCCATATTCa            >  1:272467‑M1/1‑143 (MQ=255)
                                                                                                                                      gAAAGTCTGGAcagactttcaactaacaatgtagttcctggcaatatataaccatgctctatagcctctaaaaattccgaaaaagctcctgattgtgcatgctttcctttgaatgcacttaatcctaaatcttcatatgttat           <  1:543080‑M2/143‑133 (MQ=255)
                                                                                                                                       aaaGTCTGtccagactttcaactaacaatgtagttcctggcaatatataaccatgctctatagcatctaaaaattccgaaaaagctcctgattgtgcatgctttcctttgaatgcacttaatcctaaatcttcatatgttatg          <  1:321767‑M1/143‑136 (MQ=255)
                                                                                                                                       AAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCTGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTACACTACTGTCTCTTTGAATGAGCCATATTCATta         >  2:791391‑M1/1‑143 (MQ=255)
                                                                                                                                       AAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCTTTGAATGAGCCATATTCATta         >  1:494879‑M1/1‑143 (MQ=255)
                                                                                                                                       AAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCTTTGAATGAGCCATATTCATta         >  1:477835‑M1/1‑143 (MQ=255)
                                                                                                                                       AAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCTTTGAATGAGCCATATTCATta         <  1:842250‑M1/143‑1 (MQ=255)
                                                                                                                                       AAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGAGATTGAACGTCTGAGATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCTTTGAATGAGCCATATTCATta         <  1:859369‑M1/143‑1 (MQ=255)
                                                                                                                                          GTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGGATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCTTTGAATGAGCCATATTCATtaata      <  1:91688‑M1/143‑1 (MQ=255)
                                                                                                                                           TCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCTTTGAATGAGCCATATTCATtaataa     <  1:161716‑M1/143‑1 (MQ=255)
                                                                                                                                           TCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCTTTGAATCAGCCATATTCATtaataa     <  2:576654‑M1/143‑1 (MQ=255)
                                                                                                                                              GGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCTTTGAATGAGCCATATTCGTTAATAAAAg  <  1:116564‑M1/143‑1 (MQ=255)
                                                                                                                                              GGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATCGCCTCTTTGAATGAGCCATAtccattaatcaacg  <  1:581116‑M1/143‑6 (MQ=255)
                                                                                                                                              |                                                                                                                                               
ATCTTGATACCATAACATATGAAGATTTAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAG‑ACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCTTTGAATGAGCCATATTCATTAATAAAAG  >  NC_000913/569017‑569301

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.