New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 315642 =NA (NA)7 (0.150) 7/254 NT NA noncoding (414/1255 nt) IS3 repeat region
?NC_000913 315671 = NA (NA)noncoding (443/1255 nt) IS3 repeat region

Only 100 of 140 total aligned reads displayed.

GTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/315788‑315642
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTC  >  NC_000913/315671‑315812
                                                                                                                                                                                                                                                                                                    
gcGGGCCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑G                                                                                                                                                    <  1:422393/141‑1
GTGGTGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGATTACAACGCTGTCGTAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑G                                                                                                                                                    <  1:402285/143‑1
GTGGGGCACCGTAGCGCGCTTGTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGACGGCCACCCTGAGGAC‑‑‑G                                                                                                                                                    <  2:119480/143‑1
GTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑G                                                                                                                                                    <  1:674758/143‑1
GTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑G                                                                                                                                                    >  1:785428/1‑143
 tgtGGCACCGTAACGCTGTTTTGGCCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTCTTGGCCGAACTGCTTACGCCGGCTTATCCGTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GC                                                                                                                                                   <  2:745767/140‑1
 TGGTGCACTGTAACGTTGTTTTGACCGGGTTAATGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GC                                                                                                                                                   <  1:307393/143‑1
 TGGGGCAGCGGAACGCTGGTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTAGACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GC                                                                                                                                                   <  1:306760/143‑1
 TGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTTGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GC                                                                                                                                                   <  2:817538/143‑1
 TGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGACCTGCGGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GC                                                                                                                                                   >  2:765410/1‑143
 TGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GC                                                                                                                                                   <  1:107743/143‑1
 TGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GC                                                                                                                                                   >  1:227412/1‑143
 TGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GC                                                                                                                                                   <  2:520371/143‑1
 TGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GC                                                                                                                                                   <  2:652995/143‑1
 TGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCCCTGCGGGCAACCCGGACCAC‑‑‑GC                                                                                                                                                   >  2:154478/1‑143
 TGGGGCACCGTAACGCTGTGTTGACCGGGTAAACGCCGCGAGTACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GC                                                                                                                                                   <  2:900396/143‑1
  GGGGGAGCGTACCGCTGGTTTGACCGGGTAAAAGCCGCGCGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCG                                                                                                                                                  <  2:370224/143‑1
  GGGGCACCGTAACGCTGTTTTGACCGGGTAACAGCCGCGAGGACACCGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCCCCCGGAGCGC‑‑‑GCG                                                                                                                                                  >  1:710634/1‑143
  GGGGCACCGTAACGCTGTTTTGACCGGGTAAACGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCG                                                                                                                                                  <  2:57118/143‑1
  GGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCG                                                                                                                                                  <  1:886804/143‑1
  GGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCG                                                                                                                                                  >  1:413548/1‑143
  GGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCAGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCGGACACCACATGTACCAGCCGCTGCCGGCCACGCGGAACAC‑‑‑GCG                                                                                                                                                  >  2:402611/1‑143
  GGGGCACCGTAACGCTGTTTTGACCGGGCAAAGTCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCG                                                                                                                                                  <  1:887978/143‑1
  GGGGCACCGTAACGCTGTTGTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCG                                                                                                                                                  <  1:700947/143‑1
   gggtgCCGTAACGCGGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCGG                                                                                                                                                 <  2:312434/138‑1
   GGGCACCGTAGCGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCGG                                                                                                                                                 <  1:356234/143‑1
   GGGCACCGTAACGCTGTTTTGCCCGGGTAAAAGCCGCGAAGACTAGTCTTTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCGG                                                                                                                                                 <  1:347431/143‑1
   GGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCCC‑‑‑GCGG                                                                                                                                                 >  2:771134/1‑143
   GGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCGG                                                                                                                                                 >  1:540827/1‑143
   GGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCGG                                                                                                                                                 >  2:439288/1‑143
   GGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCGG                                                                                                                                                 <  1:594199/143‑1
   GGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCACAGTGTTGGCGGAACTGCTGACGCGTGCCTATCCTTGTCCGCCGCTGACACCCCGTATACCAGCCGCCCCGACCCCCCCGGAGCAC‑‑‑GCGG                                                                                                                                                 >  2:580373/1‑143
   GGGCACCGTAACGCTGTTTGGACCGGGTAAGAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCGG                                                                                                                                                 <  1:113219/143‑1
   GGGCACCGTAACGCTGTTGTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCGG                                                                                                                                                 <  1:268096/143‑1
   GGGCACCGCAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCGG                                                                                                                                                 <  1:471847/143‑1
    GGCACCGTAACGCTGTTTTGACCGGGTAACAGCCGCTGGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCGGC                                                                                                                                                <  2:912170/143‑1
    GGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCGACGCGGAGCGC‑‑‑GCGGC                                                                                                                                                >  1:15413/1‑143
    GGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCGCCCGGAGCAC‑‑‑GCGGC                                                                                                                                                >  1:66879/1‑143
    GGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGCGCAC‑‑‑GCGGC                                                                                                                                                >  1:621582/1‑143
    GGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCGGC                                                                                                                                                >  2:908406/1‑143
    GGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCGGC                                                                                                                                                <  2:217080/143‑1
    GGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCGGC                                                                                                                                                >  2:556272/1‑143
    GGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCGGC                                                                                                                                                <  1:197770/143‑1
    GGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCAGCCGCTGACACCACCTATACCAGCCGCTGGGGGCCACCCGGAGCAC‑‑‑GCGGC                                                                                                                                                >  2:690750/1‑143
    GGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATACTTGTCCGCCGCTGACACCACGTATCCCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCGGC                                                                                                                                                >  1:838077/1‑143
    GGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTCGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCGGC                                                                                                                                                >  1:825545/1‑143
     GCACCGTAACGCTGTTTTGACCGGGTGAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTCTACCAGCCGCTGCGGGCCACCCGGAGCCC‑‑‑GCGGCc                                                                                                                                               >  1:122393/1‑142
     GCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGCCACCACGTATACCAGCCGCTGCGGGCCAGCCGGAGCAC‑‑‑GCGGCg                                                                                                                                               >  1:915446/1‑142
     GCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCCCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGCCACCACGCCTACCAGCCGCTGCGGGCCACCCGGCGCAC‑‑‑GCGccc                                                                                                                                               >  2:420871/1‑140
     GCACCGTAACGCTGTTTTGACCGGGTAAAAGACGCGAGGACAACGCTGTCGCAGTGTTGGAGGAACTGCTGGCGTGTGCATATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGAGCCACCCGGAGCAC‑‑‑Ggagga                                                                                                                                               >  1:81354/1‑138
      CACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCGccac                                                                                                                                              >  2:935226/1‑139
         CGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCGCGTATACCAGCCGCTGCGGGCCACCCGGAGCCC‑‑‑GCGGCgcagt                                                                                                                                           >  2:390045/1‑138
                                                                                                GCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACGGCGTTGTCCTCGCGGCTTTTACCCG                                                    >  1:572112/1‑143
                                                                                                                      GCCGCTGCGGGCCACCCGGA‑‑‑‑‑‑‑GCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTCTACCCGGCCAAACCAGCGTTACGGCGCCCCcc                          >  1:5673/1‑141
                                                                                                                       CCGCTGCGGGCCACCCGGA‑‑‑‑‑‑‑GCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACG                         >  1:368185/1‑143
                                                                                                                        CGCTGCGGGCCACCCGGAGCACGCGGCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTATACCCGGTCAAAACAGCGTTACGGTGC                               >  2:358166/1‑143
                                                                                                                          CTGCGGGCCACCCGGAGCACGCGGCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCCCGCGGCAGCAGTTCCGCCAACACTGCGCCAGCGTTGTCCTCGCGGCTTTTACCCGGTCCAGACAGCGTTACGCTGCCC                             >  2:576504/1‑143
                                                                                                                                            cC‑‑‑GCGGCTGGCATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTGTTACCCGGTCAGCACAGCATTACCCTCCACCACGCCTGACGGATGAACTGC        <  2:673540/142‑1
                                                                                                                                             cgcgGCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTGCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCCAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACT          <  2:240218/139‑1
                                                                                                                                               cgGCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGTGACAGCGTTGTCCTCGCGGCTTGTACCCGGTTAAAACAGCGTTTCGGTGCCCCACGCCTGACGGATGAACTGC        <  2:291791/141‑1
                                                                                                                                               cgGCGGCTGGTATACGGCGCGTCAGCGGCGGACAAGGCTAAGCACGCGTCAGCAGTCCCGCCAACACTGCGACAGCGTTGTCCGCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGC        <  1:593927/141‑1
                                                                                                                                                gGCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCG       <  2:800166/142‑1
                                                                                                                                                 gccGCTGGGCTACGGGGTGCCAGCGGCGGACAAGGATAAGCACGCGCCAGCAGTTCCGCCAACACTGCGACAGCGTTGGCCTCGCGGCGTTTACCCGGTAAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGT      <  2:498633/140‑1
                                                                                                                                                 GCGGGTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCGTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGT      <  2:693358/143‑1
                                                                                                                                                 GCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGT      >  1:700076/1‑143
                                                                                                                                                 GCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGT      <  1:56159/143‑1
                                                                                                                                                 GCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGT      >  1:463910/1‑143
                                                                                                                                                 GCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTAAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGT      <  2:316068/143‑1
                                                                                                                                                 GCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTGCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGT      <  1:552671/143‑1
                                                                                                                                                 GCGGCTGGTAGACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGT      <  2:153857/143‑1
                                                                                                                                                  CGGCTGGTATACGTGGTGTCCGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTG     <  2:629006/143‑1
                                                                                                                                                  CGGCTGGTATACGTGGTGTCAGCGGTGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTG     >  2:732843/1‑143
                                                                                                                                                  CGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCGCCACAGCTACAGCGTGGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTG     <  1:215624/143‑1
                                                                                                                                                  CGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTGAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGcg     >  2:234083/1‑141
                                                                                                                                                  CGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCGAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTG     >  1:786891/1‑143
                                                                                                                                                  CGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGGGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTG     >  1:731729/1‑143
                                                                                                                                                  CGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGCCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTG     >  1:496802/1‑143
                                                                                                                                                  CGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGAGGCTTCTAATCGATCAAAACAGCGCTACGGGGCCCCACGCCTGACGGGTGAACCGCGTG     >  2:706059/1‑143
                                                                                                                                                  CGGCTGGTACACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTG     <  1:366282/143‑1
                                                                                                                                                   cGCTGGTATACTTGGTGTCAGCGGCGGACAAGGATCAGCACGCGTCAGCAGTTCCGCCCACACTGCGACAGCGTTGTCCTCGCGCCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGACCTGCGTGC    <  2:542066/142‑1
                                                                                                                                                   GGCTGGTATACGTGGTGTCAGCGGCGGCCAAGGAGAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGggcgc    >  1:741257/1‑138
                                                                                                                                                   GGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTGTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGC    <  1:850073/143‑1
                                                                                                                                                   GGCTGGGATACGTGCTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGC    <  2:187616/143‑1
                                                                                                                                                    GCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAGCAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGccgc   >  2:403515/1‑139
                                                                                                                                                    GCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTCCGGTGCCCCACGCCTGACGTATGAACTGCGTGCT   >  1:92488/1‑143
                                                                                                                                                    GCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCT   >  1:788913/1‑143
                                                                                                                                                    GCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCT   >  1:429730/1‑143
                                                                                                                                                    GCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCT   >  1:477764/1‑143
                                                                                                                                                    GCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGAGGGACTGCGTGCT   >  1:83572/1‑143
                                                                                                                                                    GCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGACCCACGCCTGAAGGATGGACTGCGTGCT   >  1:402132/1‑143
                                                                                                                                                    GCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTCACGGTGCCCCACGCCCGACGGACAAACCGCGTGC  >  2:205457/1‑142
                                                                                                                                                    GCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAAAACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCACCACGCCTGACGGATGAACTGGGTGat   >  1:74709/1‑141
                                                                                                                                                    GCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCATCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCT   >  1:757647/1‑143
                                                                                                                                                    GCTGGTATACGTGGTGTCAGCGGCGGACAAGGAAAAACACGCGTCAGCAGTTCCGCCAACACTGCGACAGACTCGTGCGCGCGGCGATTACCCGTTCAAAACAGCGTTACGGTGCACCACGCCTGACGGATGAACTGCGTGC  >  2:510044/1‑142
                                                                                                                                                    GCTGGTATACGTGGTGTCAGCGGCGGAAAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCT   >  1:741090/1‑143
                                                                                                                                                    GCTGGTAGACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCCCGCCTGCCGGGCGAACTGCGTGC  >  2:879687/1‑142
                                                                                                                                                     CTGGTATACGTGGTGTCAGCGGCGGACACGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTC  <  1:730859/143‑1
                                                                                                                                                     CTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTC  <  1:762296/143‑1
                                                                                                                                                     CTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTC  <  1:372335/143‑1
                                                                                                                                                     CTGGTATACGTGGTCTCAGCCGCTGACAAGGATAAGCACGCGTCAGCAGCTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTC  <  1:5353/143‑1
                                                                                                                                                                                                                                                                                                    
GTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCAC‑‑‑GCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/315788‑315642
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTC  >  NC_000913/315671‑315812

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.