New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 315689NA (NA)3 (0.060) 3/258 NT NA noncoding (461/1255 nt) IS3 repeat region
?NC_000913 = 315751 NA (NA)noncoding (523/1255 nt) IS3 repeat region

Only 100 of 102 total aligned reads displayed.

TATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/315545‑315689
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGT  <  NC_000913/315751‑315610
                                                                                                                                                                                                                                                                                               
tagCCTCCAAAAGGCCGCGACATACTTGGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAGAACACCAGGCCGGGTTCAGCATCAAATCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  <  2:668498/140‑1
TATCCTCCAAAAGGCCTCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGACCAAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  <  1:131821/143‑1
TATCCTCCAAAAGGCCGCGCCATTCTTCGCGAAGCCCCTGAAAGCAACTATGTCTTTTTTGAAAACCATCAGGCTGAGTTCAGCATCAAAGCATTGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  <  1:771304/143‑1
TATCCTCCAAAAGGCCGCGCCATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAACACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  >  1:42824/1‑143
TATCCTCCAAAAGGCCGCGACATACTTCTCGATGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  <  2:5877/143‑1
TATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCGCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  >  1:864774/1‑143
TATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  >  1:345331/1‑143
TATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  >  1:658537/1‑143
TATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  >  1:313407/1‑143
TATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  <  1:869947/143‑1
TATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  >  1:278047/1‑143
TATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  >  1:410697/1‑143
TATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  >  2:443547/1‑143
TATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  >  1:211795/1‑143
TATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  >  1:445095/1‑143
TATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  <  2:161429/143‑1
TATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  >  2:21386/1‑143
TATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTCGTATACGTGGGGTCA                                                                                                                                                  >  1:66948/1‑143
TATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCCCCGCGTGCCCCGCAGCGGCTGGTATACGCGGCGTCA                                                                                                                                                  >  2:154602/1‑143
TATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTGCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  <  1:278559/143‑1
TATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGCTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGGCTACGTGGGGTCA                                                                                                                                                  >  2:120929/1‑143
TATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTCTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATCTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTCTACGTAGTGTCA                                                                                                                                                  >  2:309033/1‑143
TATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCGGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAAGGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  >  1:301564/1‑143
TATCCGCCAAAGGGCCGCGACATACTTCGCGAAGCGCCTGAAATGGAGTATGTCTTTATTGAAAAACATCAGGCGGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  <  1:303444/143‑1
TATCCCCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  <  1:886441/143‑1
 cTCCGCCAGAGGGCCGCGACGTACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAGAACATCAGGCTGAGTCCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAG                                                                                                                                                 <  2:652971/142‑1
 aaCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAG                                                                                                                                                 <  1:443124/141‑1
 ATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGCAGGATGTCTTTATTGAAAGACATCAGGCTGAGTTCAGCATCATAGAAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAG                                                                                                                                                 <  2:46487/143‑1
 ATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCATTCTGAGTTGAGCGTCAAAGCAAGTTGCCGCGTGCACCGGGTGTCCCGCATCGGCTGGTATACGTGGTGTCAG                                                                                                                                                 <  2:417076/143‑1
 ATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAG                                                                                                                                                 <  1:320809/143‑1
 ATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAG                                                                                                                                                 <  1:451813/143‑1
 ATCCACCAAACGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTATTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAG                                                                                                                                                 <  1:630558/143‑1
  tcgTCCAAAAGGCCGCGACGGACTTCGCGAAGCGCCTGAAATGAAGTATGTCGTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGC                                                                                                                                                <  2:896649/140‑1
  TCCTCCTATAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAGGTATGTCTTTATTGAAAAACATCAGGCTGAGTGCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGC                                                                                                                                                <  1:178561/143‑1
  TCCTCCACACGGCCGCGACCTTCTCCGCGAAGCGCCTGAAACGCAGTATGTCTTTATCGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGC                                                                                                                                                <  1:733420/143‑1
  TCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATTAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCGTCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCTGCAGCGGCTGGTATACGTGGTGTCAGC                                                                                                                                                <  2:401847/143‑1
  TCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTCTACGCGGTGCCAGC                                                                                                                                                >  2:33845/1‑143
  TCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTGAGC                                                                                                                                                >  1:101097/1‑143
  TCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGC                                                                                                                                                <  2:150109/143‑1
  TCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGC                                                                                                                                                >  1:806630/1‑143
  TCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGC                                                                                                                                                >  1:184600/1‑143
  TCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGC                                                                                                                                                >  2:555269/1‑143
  TCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGC                                                                                                                                                >  1:136574/1‑143
     TCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGCAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGTAATTTGCCGCGTGCTACGGGTGGCCCGCAGCGGCTGTGATCCATGGAGTCAGaggc                                                                                                                                             >  1:360962/1‑139
     TCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCCGGCTGAGCTCAGCAGCACAGCAATGTGCCGCGTGCCCCGGGCGGCCCGCCGCGGCTGGTACCCGCGGTGTCAGCCGC                                                                                                                                             >  2:108931/1‑143
      CCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGCCTGGGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTGTACGTGCTGTCAGCCGCG                                                                                                                                            >  2:541700/1‑143
                       ACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGC                                                                                                                                                >  2:605968/1‑122
                       ACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGC                                                                                                                                                <  1:605968/122‑1
                                                            GAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGAGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTC                                                                                      >  2:186052/1‑143
                                                               AAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  >  2:658389/1‑80
                                                               AAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCA                                                                                                                                                  <  1:658389/80‑1
                                                                             GTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGAGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGT                                                                     <  1:186052/143‑1
                                                                                                                                     cggGGTGACAGCGGCGAGGACATCGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACT             <  2:119570/140‑1
                                                                                                                                       gggtagCAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGACCTGCTGACGCGTGCGTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCA           <  2:471156/137‑1
                                                                                                                                        tctacagGCCGCCAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAG          <  1:75900/136‑1
                                                                                                                                        ggtcaacGCCGCGACGCCAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAG          <  2:352362/136‑1
                                                                                                                                         ggaaagGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTCTCCTATTCCGCCGCTGACACCACGTATACCAGCCGCGGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGC         <  1:348556/137‑1
                                                                                                                                         gcagacGCCGCGAGGACAACGCTGTCGCCGTGCTGGCGGAACTGCTGACGCGTGCTTATCCCTGTCCGCCGCTGACACCACGTATACCAGCCGCGGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGC         <  2:485788/137‑1
                                                                                                                                           aagAGCCGCGACGCAAACGCTGTCGCAGTGTTGGCGGAACTGCTGCCGCGTGCTTATCCTCGTCCGCCGCTGACACCGCGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCT       <  2:510653/140‑1
                                                                                                                                           aaacGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCT       <  1:497059/139‑1
                                                                                                                                           aaCAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCT       <  1:643646/141‑1
                                                                                                                                            aacGCCGCGAGGCCAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTG      <  1:59865/140‑1
                                                                                                                                             gacCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTGGGCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGA     <  2:370011/140‑1
                                                                                                                                             gAGCCGCGCGGACACCTCTGTCGCAGTGCGGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCTCGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGA     <  2:274308/142‑1
                                                                                                                                             agGCCGCGAGGGCAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCGCGTAGACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGA     <  2:820766/141‑1
                                                                                                                                             CAGCCGCGGGGACAGCGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGA     <  2:874488/143‑1
                                                                                                                                             CAGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCGGACGCGTGCTTATCCTTGGCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGA     <  2:11762/143‑1
                                                                                                                                              gGCCGGGAGGATAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTCCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGCGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGAT    <  1:744729/142‑1
                                                                                                                                              gGCCGCGAGGACCACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCGCGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGAT    <  2:846755/142‑1
                                                                                                                                              AGCTGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGAT    <  1:71857/143‑1
                                                                                                                                              AGCCGTGAGTACAACGCTGTGGCAGTGTTGGAGGAACTGCTGACGCGTGCTGATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGTTTTGATGCTGAACTCAGCCTGAT    <  1:275630/143‑1
                                                                                                                                              AGCCGCGGGGGCAACGCTGTCGCTGTGGGGGCGGAACTGCTGACGCGTGCTTACCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGAT    <  2:658994/143‑1
                                                                                                                                              AGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGTTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGAT    <  1:842776/143‑1
                                                                                                                                              AGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCTGTAGGTGTTACCACCCATATCGGACGCTGCGCCCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGAT    <  1:690902/143‑1
                                                                                                                                              AGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGAT    >  2:397847/1‑143
                                                                                                                                              AGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGAT    >  1:838865/1‑143
                                                                                                                                              AGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGAT    <  1:276135/143‑1
                                                                                                                                              AGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGAT    <  1:331579/143‑1
                                                                                                                                              AGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGAT    <  2:172990/143‑1
                                                                                                                                              AGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGAT    <  2:114326/143‑1
                                                                                                                                              AGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGAT    <  1:486810/143‑1
                                                                                                                                              AGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGAT    <  1:944567/143‑1
                                                                                                                                              AGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGAT    <  1:746285/143‑1
                                                                                                                                              AGCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTCAGCCTGGTCCGCCCCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGAT    <  2:281719/143‑1
                                                                                                                                               cCCGCGAGGCCAACGCTGTCGCAGTGCCGCCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACTTATACCAGCCGCTGCGGGCCTCCCGGAGCACGCGGCACATTGCTTTGATGCTCAACTCAGCCTGATG   <  1:460165/142‑1
                                                                                                                                               GCCGGGAGGACAGCGGCGTCGCAGCGTCGGCGGAACTGCTGACGTGTGCTCAGCCTCGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGGACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATG   <  1:349158/143‑1
                                                                                                                                               GCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACTCGGCACATTGCATTGATGCTGAACTCAGCCTGATG   >  1:805368/1‑143
                                                                                                                                               GCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATG   >  1:537953/1‑143
                                                                                                                                               GCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATG   >  2:731190/1‑143
                                                                                                                                               GCCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACAAAAAATAACAGCCGCTGCTGGTGACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATG   >  1:938933/1‑143
                                                                                                                                                CCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCGCGTTGCTTTGATGCTGAACTCAGCCTGATGT  >  1:99303/1‑143
                                                                                                                                                CCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGCACTCAGCCcgctgg  >  2:204767/1‑137
                                                                                                                                                CCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGT  >  1:753980/1‑143
                                                                                                                                                CCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGT  >  1:692118/1‑143
                                                                                                                                                CCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGT  >  2:380798/1‑143
                                                                                                                                                CCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGT  >  1:135281/1‑143
                                                                                                                                                CCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACAACGTATACCAGCCGCGGCGGGCCACCCGGAGGAAGCCGCGGGTGGCTGTGATGCGGAGCTCAGCCTGATGT  >  1:636849/1‑143
                                                                                                                                                CCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCATTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGT  >  1:112513/1‑143
                                                                                                                                                CCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCGTATCCTTGGCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGT  <  2:856485/143‑1
                                                                                                                                                CCGCGAGGACAACGCTGTCGCAGTGCTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCGCGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCCGATGT  <  2:880587/143‑1
                                                                                                                                                                                                                                                                                               
TATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/315545‑315689
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcCGCGAGGACAACGCTGTCGCAGTGTTGGCGGAACTGCTGACGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGT  <  NC_000913/315751‑315610

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.