New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	342552 =	56 (1.180)	3 (0.070)	3/252	NT	5.4%	intergenic (+45/‑332)	yahJ/yahK	putative deaminase with metallo‑dependent hydrolase domain/aldehyde reductase, NADPH‑dependent
	?	NC_000913	342569 =	52 (1.150)					intergenic (+62/‑315)	yahJ/yahK	putative deaminase with metallo‑dependent hydrolase domain/aldehyde reductase, NADPH‑dependent

ATCTGTAAAAGACTAAAATCGGCAAAACTGATGATCTTTTCACGTAGACAAATAGTTATCTACACAACGTCAATAAGGGCATATTCCTCAAAGATAATGTCCATTTCTGCCGACACACTCATATTCAGATTGCCCCACTCCCTGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/342699‑342552 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggggcAATCTGAATATGAGTGTGTCGGCAGAAATGGACATTATCTTTGAGGAATATGCCCTTATTGACGTTGTGTAGATAACTATTTGTCTACGTGAAAAGATCATCAGTTTTGCCGATTTTAGTCTTTTAC  >  NC_000913/342569‑342695                                                                                                                                                                                                                                                                                     ATCTGTAAAAGACCAAGATCGGAGAAACTTATGATCTCTTCACGTAGACAAATAGTTATCTACACAACGTCAATAAGGGCATATTCCTCAAAGATAATGTCCATTTCTGCCGACACACTCATATTCAGATTGCCCCACTCCCT                                                                                                                                      <  2:102788/143‑1  TCTGTAAAAGACTAAAATCGGCAAAACTGATGATCTTTTCACGTAGACAAATAGTTATCTACACAACGTCAATAAGGGCATATTCCTCAAAGCTACTGATGCTAATTTCCGACACACTCACACGCAGATTGCCCCACTCCCTG                                                                                                                                     >  1:428755/1‑143   CTGTAAAAGACTAAAATCGGCAAAACTGATGATCTTTTCACGTAGACAAATAGTTATCTACACAACGTCAATAAGGGCATATTCCTCAAAGATAATGTCCATTTCTGCCGACACACTCATATTCAGATTGCCCCACTCCCTGG                                                                                                                                    >  1:881365/1‑143      TAAAAGACTAAAATCGGCAAAACTGATGATCTTTTCACGTAGACAAATAGTTATCTACACAACGTCAATAAGGGCATATTCCTCAAAGATAATGTCCATTTCTGCCGACACACTCATATTCAGATTGCCCCACTCCCTGGGGC                                                                                                                                 >  1:2828/1‑143      TAAAAGACTAAAATCGGCAAAACTGATGATCTTTTCACGTAGACAAATAGTTATCTACACAACGTCAATAAGGGCATATTCCTCAAAGATAATGTCCATTTCTGCCGACACACTCATATTCAGATTGCCCCACTCCCTGGGGC                                                                                                                                 >  1:290735/1‑143      TAAAAGACTAAAATCGGCAAAACTGATGATCTTTTCACGTAGACAAATAGTTATCTACACAACGTCAATAAGGGCATATTCCAAAAAGATAATGTCCATTTCTGCCGACACACTCATATTCAGATTACCCCACTCCCTGGGGC                                                                                                                                 >  2:562720/1‑143                                                                                                          TCTGACGACACACTCATATTCAGATTGCCCCACTCCCTGGGGCAATCCGAATATGAGTGTGTCGGCAGAAATGGACATTCTCTTTGAGGAATATGCCCTTATTGACGTTGTGTAGATAACTCGTAGACTACGTGAAAAGACCA                             >  2:162602/1‑143                                                                                                               CGACACACTCATATTCAGATTGCCCCACTCCCTGGGGCAATCTGAATCTGAGTGTGTCGGCAGAAATGGACATTATCTTTGAGGAATATGCCCTTATTGACATTGTGTAGATAACTATTTGTCTACGTGAATAGATCCTCAGT                        >  1:640610/1‑143                                                                                                                                     CCCCACTCCCTGGGGCAATCTGAATATGAGTGTGTCGGCAGAAATGGACATTATCTTTGAGGAATATGCCCTTATTGACGTTGTGTAGATAACTATTTGTCTACGTGAAAAGATCATCAGTTTTGCCGATTTTAGTCTTTTAC  >  2:211382/1‑143                                                                                                                                                                                                                                                                                     ATCTGTAAAAGACTAAAATCGGCAAAACTGATGATCTTTTCACGTAGACAAATAGTTATCTACACAACGTCAATAAGGGCATATTCCTCAAAGATAATGTCCATTTCTGCCGACACACTCATATTCAGATTGCCCCACTCCCTGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/342699‑342552 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggggcAATCTGAATATGAGTGTGTCGGCAGAAATGGACATTATCTTTGAGGAATATGCCCTTATTGACGTTGTGTAGATAACTATTTGTCTACGTGAAAAGATCATCAGTTTTGCCGATTTTAGTCTTTTAC  >  NC_000913/342569‑342695

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.