New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2045732	55 (1.160)	3 (0.070)	3/250	NT	5.3%	coding (795/7077 nt)	yeeJ	inverse autotransporter adhesin
	?	NC_000913	= 2045738	55 (1.230)					coding (801/7077 nt)	yeeJ	inverse autotransporter adhesin

TCTTTTTCAGTCAGCATACTCTCCATCGTACTGACGAGCGTACGCAGATTAACAACGGCTTAGGTTGGCGTCATTTCACTCCCACATGGATGTCGGGCATCAACTTCTTTTTCGACCACGATCTTAGCCGTTACCACTCCCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2045587‑2045732 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccAATGCCGGCGCGGGAGTGGTAACGGCTAAGATCGTGGTCGAAAAAGAAGTTGATGCCCGACATCCATGTGGGAGTGAAATGACGCCAACCTAAGCCGTTGTTAATCTGCGTACGCTCGTCAGTACGATGGAGAGTATGCT  <  NC_000913/2045738‑2045599                                                                                                                                                                                                                                                                                                TCTTTTTCAGTCAGCATACTCTCCATCGTACTGACGAGCGTACGCAGATTAACAACGGCTTAGGTTGGCGTCATTTCACTCCCACATGGATGTCGGGCATCAACTTCTTTTTCGACCACGATCTTAGCCGTTACCACTCCCGC                                                                                                                                                 >  1:318426/1‑143  CTTTTTCAGTCAGCATACTCTCCATCGTACTGACGAGCGTACGCAGATTAACAACGGCTTAGGTTGGCGTCATTTCACTCCCACATGGATAGGAAGTTTCAACTTCTTTTTCGACCACGATCTTAGCCGTTACCACTCCCGCG                                                                                                                                                >  1:685148/1‑143   gttgtcgGTCAGCATACTCTCCATCGTACTGACGAGCGTACGCAGATTAACGACGGCTTAGGTTGGCGTCATTTCCCTCCCACATGGATGTCGGGCATCAACGTCTTTTTCGACCACGATCTTAGCCGTTACCACTCCCGCGC                                                                                                                                               <  2:434475/136‑1   TTTTGCAGCCAGCATCCTCTCCATCGTACTGACGAGCGTACGCAGATTAACAACGGCTTAGGTTGGCGTCATTTCACTCCCACATGGATGTCGGGCATCAACTTCTTTTTCGACCACGATCTTAGCCGTTACCACTCCCGCGC                                                                                                                                               <  2:771119/143‑1                 TACTCTCCATCGTACTGACGAGCGTACGCACATTAACAACGGCTTAGGTTGGCGTCATTTCACTCCCACATGGATGTCGGGCATCAACTTCTTTTTCGACCACGATCTTAGCCGTTACCACTCCCGCGCCAATGCCGGCGCGG                                                                                                                                 <  2:652174/143‑1                                 GACGAGCGTACGCAGATTAACAACCGCTTAGGTTGGCGTCATTTCACTCCCACATGGATGTCGGGCATCAACTTCTTTGTCGCCCACGATCTTAGCCGTTACCACTCCCGCGCCAATGCCGGCGCGGGAGTGGTAACGGCTAA                                                                                                                 <  1:367591/143‑1                                           cggtggTTAACGAAGTCTTAGGTTAGCGTCATTTCACTCCCACATGGATGTCGGGCATCAATTTCTTTTTCGAGCGCGATCTTAGCGGTTACCACTCCCGCGCCAATGCCGGCGCGGGAGTGGTAACGGCTAAGATCGTGGTC                                                                                                       <  2:310566/137‑1                                                                                                                                             CGCGCCAATGCCGGCGCGGGAGTGGTAACGGCTAAGATCGTGGTCGAAAAAGAAGTTGATGCCCGACATCCATGTGGGAGTGAAATGACGCCAACCTAAGCCGTTGTTAATCTGCGTACGCTCGTCAGTACGATGGAGAGTAT     >  1:381032/1‑143                                                                                                                                             CGCGCCAATGCCGGCGCGGGAGTGGTAACGGCTAAGACCGTGGTCGAAAAAGAAGTTGATGCCCGACATCCATGTGGGAGTGAAATGACGACTAACTAAGCCGTTGTTAATCTGCGTACGCTCGTCCGTACGATGGAcgtgct     >  2:154524/1‑137                                                                                                                                              GCGCCAATGCCGGCGCGGGAGTGGTAACGGCTAAGATCGTGGTCGAAAAAGAAGTTGATGCCCGACATCCATGTGGGAGTGAAATGACGCCAACCTAAGCCGTTGTTAATCTGCGTACGCTCGTCAGTACGATGGAGAGTATG    >  2:254875/1‑143                                                                                                                                                GCCAATGCCGGCGCGGGAGTGGTAACGGATAAGATCGTGGTCGAAAAAGAAGTTGATGCCCGACATCCATGTGGGAGTGAAATGACGCCAACCTAAGCCGTTGTTAATCTGCGTACGCTCGTCAGTACGATGGAGAGTATGCT  <  1:636563/143‑1                                                                                                                                                                                                                                                                                                TCTTTTTCAGTCAGCATACTCTCCATCGTACTGACGAGCGTACGCAGATTAACAACGGCTTAGGTTGGCGTCATTTCACTCCCACATGGATGTCGGGCATCAACTTCTTTTTCGACCACGATCTTAGCCGTTACCACTCCCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2045587‑2045732 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccAATGCCGGCGCGGGAGTGGTAACGGCTAAGATCGTGGTCGAAAAAGAAGTTGATGCCCGACATCCATGTGGGAGTGAAATGACGCCAACCTAAGCCGTTGTTAATCTGCGTACGCTCGTCAGTACGATGGAGAGTATGCT  <  NC_000913/2045738‑2045599

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.