| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1061939 = | 41 (0.870) | 3 (0.070) | 3/248 | NT | 7.2% | coding (141/600 nt) | torD | trimethylamine‑N‑oxide reductase‑specific chaperone |
| ? | NC_000913 | 1061960 = | 39 (0.880) | coding (162/600 nt) | torD | trimethylamine‑N‑oxide reductase‑specific chaperone | |||||
TCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT > NC_000913/1061797‑1062077 | ctcgtcctgtttgtaggccgatgcatacggcagcgccgcttgtttgtcggtcatcagaaacaggctgcaaaagtccgcggccagttcgagacgggcatcgtcacgtcctgtcagcgtgagagtacggttttccagctcgttca < 1:619556‑M1/1‑1 (MQ=255) ccACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCACGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAACGCGAAccgccg > 1:370418/1‑143 (MQ=255) tgtttgtaggccgatgcatacggcagcgccgcttgtttgtcggtcatcagaaacaggccgcaaaagtccgcggccagttccagacgggcatcgtcacgtactgtcagcgtggcaatacggttttccagctcgttcACcgccgc < 1:814028‑M1/8‑1 (MQ=255) aGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGCACCGCCGCCCACTgcgg > 2:218574/1‑143 (MQ=255) cacaACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTgcggcg > 1:568861/1‑143 (MQ=255) gatgcataccgcagcgccgcttgtttgtcggtcatcagaaacaggccgcaaaagtccgcggccagttccagacgggcatcgtcacgtactgtcagcgtggcaatacggttttccagctcgttcACCGCCGCTCACTGcggcgg > 1:359185‑M1/124‑143 (MQ=255) tGCTTGTTTTTACGGCTTGCTAGCGGATTTGTTACACCGTGAGCTGGACGATGAACAACTGACGCAGATCGGCAGTGCGCAGAGGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGc < 1:61479/143‑1 (MQ=255) tGCCTGTGTTTACGCCGGGCTAGCGCAGTTGTTCTCCCGTGGGCGGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTGTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGc < 2:318196/143‑1 (MQ=255) ccTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTg < 1:285066/143‑1 (MQ=255) cTGTGCTTACGCCTGGCGAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTgg < 1:157975/143‑1 (MQ=255) tttACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAAc > 1:443430/1‑143 (MQ=255) tACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCg > 2:899352/1‑143 (MQ=255) gcccgtgCTATCGCAGGGGTGCCCCCGTGGGCTGGACGATGAACAACTGGCGCAAATCGCCAGTGCGCAGATGGCTGAAGGGTGGTCGTTGCTGAAGAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTa < 2:704554/137‑1 (MQ=255) ggCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTAGTGcc > 1:722887/1‑143 (MQ=255) gCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACGGCGGCGGTGAACGAGCTGGAAAACCGTACTGCCa > 2:83402/1‑143 (MQ=255) tAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGCACGAGCTGGCAAACCGTCTTGCCACg > 2:897576/1‑143 (MQ=255) aGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTTCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACa < 1:430904/143‑1 (MQ=255) aacaggccgcaaaagtccgcggccagttccagacgggcatcgtcacgtactgtcagcgtggcaatacggttttccagctcgttcACCGCCGCTCACTGCGGCGGTGAACGAGCTg > 2:329427‑M1/85‑115 (MQ=255) aacaggccgcaaaagtccgcggccagttccagacgggcatcgtcacgtactgtcagcgtggcaatacggttttccagctcgttcACCGCCGCTCACTGCGGCGGTGAACGAGCTg < 1:329427‑M1/31‑1 (MQ=255) tcCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGa > 1:539886/1‑143 (MQ=255) tgcaCGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGt < 1:150693/140‑1 (MQ=255) tGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCCCGCTGACAGTACGTGACGATGCCCGTCTGGAAc > 2:863904/1‑143 (MQ=255) gAACAACTGACGCAAATCGCCTGTGCGCAGATGGCTGAATGGTTTTCTTTTCTGAAAAGCGAACCTCCGCGCCCTGCCGCGGTCATCGAGCTGGCAAACCTTATTGCCCCGCTGCCAGTACTTGACGATGCCCGTCTGGAACt > 1:671151/1‑143 (MQ=255) acacccgACGCGAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTgg < 2:683160/137‑1 (MQ=255) caacTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGc > 1:108980/1‑143 (MQ=255) gCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACt > 1:193295/1‑143 (MQ=255) aaTCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACtttt < 2:635835/143‑1 (MQ=255) ccAGTGCGCGGATGGCGGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGc < 2:220734/143‑1 (MQ=255) gTGCGCAGATGGCTGAATGGATTTCGTTACAGGATAGCGACCCGCGGCTGACTGCGGCGGTGGACGAGCTGGAAAACGGTATTGCGAAGCTGACCGTACGGGACGCTGCCGGGCTGGAACAGGCCGCCGCCGTTAGCGGACTg > 2:937130/1‑143 (MQ=255) gcAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACAGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGAGGGCCGTCTGGAACTGGGCGCGGACCTTTGGGGCCTgggtc > 2:340026/1‑139 (MQ=255) cAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCt < 2:784932/143‑1 (MQ=255) ggtGGCTGAATGGCTGTCGTTGCTGAAACGCGAACCGCCGGTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCtga < 2:230885/141‑1 (MQ=255) gatggatgAATGGTTTTCGTTGATGAAAAGCGAACCGCTGCTCACTGCGGCGGTGAACGAGCTTGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCtga < 2:274732/143‑1 (MQ=255) gATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCtga < 1:814159/143‑1 (MQ=255) gATGGCTGAACGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCtga < 1:596832/143‑1 (MQ=255) tGAAGGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCg < 1:447666/143‑1 (MQ=255) gAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGGCTGGAACTGGCCGCGGACTTTTGCGACCTGTTCCtcatgcacga > 2:298929/1‑138 (MQ=255) ttCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAg > 1:540241/1‑143 (MQ=255) ttCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAg < 1:69383/143‑1 (MQ=255) cGTTGCTGAGAGGCGAACCGCCGCTCACGGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAgcg < 2:130702/143‑1 (MQ=255) cGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAgcg < 1:622804/143‑1 (MQ=255) gTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAgcgg < 1:914391/143‑1 (MQ=255) ttGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGACGACCGACAAAGAAgcggc > 2:654588/1‑143 (MQ=255) tGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAgcggcg < 2:439131/143‑1 (MQ=255) gCTGAAAACCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGgcgc < 1:375962/143‑1 (MQ=255) cTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCt > 1:639885/1‑143 (MQ=255) gCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTCTTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGCTTCCGACGACCCCCAACCCAGCGCCGCCGCCGTAt > 1:205478/1‑143 (MQ=255) | TCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT > NC_000913/1061797‑1062077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |