New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3810274 =	NA (NA)	3 (0.070)	3/250	NT	NA	coding (450/480 nt)	coaD	pantetheine‑phosphate adenylyltransferase
	?	NC_000913	3810291 =	NA (NA)					coding (467/480 nt)	coaD	pantetheine‑phosphate adenylyltransferase

GCATATGAATCGCCACTTAATGCCGGAACTGGAAAGTGTGTTTCTGATGCCGTCGAAAGAGTGGTCGTTTATCTCTTCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGATGGTATGCCATCCGGCGCGCATGAATTACTTCTGGCACTGCCGACAATAAAACGTTGCCCGCTGCGCATGTTTAGTCGCCACAATCGGCGTAC  >  NC_000913/3810133‑3810410                                                                                                                                              |                                                                                                                                         gggagccgtgtcgggtgtgcggtacgccgattgtggcgactaaccatgcgcagcgggcaacgttttattgtcggcagtgccagaagtaattcatgcgcgccggatggcataccatccggcataaacgctacgctaacttcgcc                                                                                                                                         >  1:160741‑M1/142‑143 (MQ=255)     atGAATCGCCACTTAATGCCGGAACTGGAAAGTGTGTTTCTGATGCCGTCGAAAGAGTGGTCGTTTATCTCTTCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCa                                                                                                                                     >  1:705239/1‑143 (MQ=255)      ccgtgtcgggtgtgcggtacgccgattgtggcgactaaacaagcgcagcgggcaacgttttattgtcggcagtgcccgaagtacttcatgcgcgccggatgacatagcatccggcataaccgccacgctacgttcgCCATCAg                                                                                                                                    <  2:874749‑M1/7‑1 (MQ=255)       gAATCGCCACTTAATGCCGGAACTGGAAAGTGTGTTTCTGATGCCGTCGAAAGAGTGGTCGTTTATCTCTTCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAgc                                                                                                                                   <  1:717185/143‑2 (MQ=255)          tCGCCACTTAATGCCGGAACTGGAAAGTGTGTTTCTGATGCGGTCGAAAGAGTGGTCGTTTATCCCTCAAACGTCGTTTATGGTGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGACTGTCCATCAGgcgc                                                                                                                                >  1:690334/1‑143 (MQ=255)          tCGCCACTTAATGCCGGAACTGGAAAGTGTGTTTCTGATGCCGTCGAAAGAGTGGTCGTTTATCTCTTCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGCACAATACCCATCAGgcgc                                                                                                                                >  2:3712/1‑143 (MQ=255)           cGCCACTCAATGCCGTAACTGGAAAGTGTGTTTCTGATGCCGTCGAAAGAGTGGTCGTTTATCTCTTCATCGTTGGTCAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCt                                                                                                                               <  1:513336/143‑1 (MQ=255)             actgttAAGGCCGGAACTGGAAAGTGTGTGTCTGATGCCGTCGAAAGAGTGGTCGTTTATCTCTTCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGa                                                                                                                             <  2:496390/139‑1 (MQ=255)                  tgcggtacgccgattgtggcgactaaacatgcgcagcgggcaacgttttattgtcggtagtgccagaagtaattcatgcgcgccggatggcataccatccggcataaacgctacgctaacttcgCCATCAGGCGCTGATGGCg                                                                                                                        >  2:295510‑M1/125‑143 (MQ=255)                   aaTGCCGGAACTGGAAAGTGTGTTTCTGATGCCGTCGAAAGAGTGGTCGTTTATCTCTTCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGCCGa                                                                                                                       >  2:418858/1‑143 (MQ=255)                               ggAAAGTGTGTTTCTGATGCCGGCGCAAGAGCGGTCGTTTATCTCTTCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTtagcgtagc                                                                                                           <  1:258708/143‑1 (MQ=255)                                  aaGTGTGTTTCTGATGCCGTCGAAAGAGTGGTCGTTTATCTCTTCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGCCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGtt                                                                                                        >  2:437699/1‑143 (MQ=255)                                    gtgggtTTCTGATGCCGTCGAAAGAGTGGACGTTTATCTCTTCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCGCCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTa                                                                                                      <  2:931222/143‑1 (MQ=255)                                       tttttCTGATGCCGTCGTAATAGTGGTCTTTTATCTCTTCTTCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCAGTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGc                                                                                                   <  1:165308/141‑1 (MQ=255)                                        gtTTCTGAGGCCGTCGAAAGAGTGGTCGTTTATCTCTTCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGcc                                                                                                  <  2:687394/143‑1 (MQ=255)                                         tttCTGATGCCGTCGAAAGAGTGGTCGTTTATCTCTTCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCg                                                                                                 <  2:403920/143‑1 (MQ=255)                                         tttCTGATGCCGTCGAAAGAGTGGTCGTTTATCTCTTCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCg                                                                                                 <  1:774329/143‑1 (MQ=255)                                             tGATGCCGTCGAAAGAGTGGTCGTTTATCTCTTCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGATg                                                                                             <  1:706777/143‑1 (MQ=255)                                              gATGCCGTCGAAAGAGTGGTCGTTTATCTCTTCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGATgg                                                                                            >  2:316232/1‑143 (MQ=255)                                               aTGCCGTCGAAAGAGTGGTCGTTTATCTCTTCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTCGCGTAGCGTTTATGCCGggtggt                                                                                           >  1:878309/1‑143 (MQ=255)                                                   ggTCGAAGGGGTGGTCGTGTATCGCTTGATTGTTGGTGAGAGAGGTGGCGCGCCATCAGGGCGATGTCCCCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCggatgggatgg                                                                                       <  2:382012/142‑2 (MQ=255)                                                    gTCGAAAGAGTGGTCGTTTATCTCTTCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGTTGTTTTGcc                                                                                      >  1:887961/1‑143 (MQ=255)                                                           gagTGGTCGTTTATCTCTGCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGATGGCATACCATCCGgc                                                                               <  1:806443/143‑1 (MQ=255)                                                                 ttattgtcggcagtgccagaagtaattcatgcgcgccggatggcataccatccggcataaacgctacgctaacttcgCCATCAGGCGCTGATGGCGAAGTtagcgtag                                                                                                            <  2:40313‑M1/31‑1 (MQ=255)                                                                 ttattgtcggcagtgccagaagtaattcatgcgcgccggatggcataccatccggcataaacgctacgctaacttcgCCATCAGGCGCTGATGGCGAAGTtagcgtag                                                                                                            >  1:40313‑M1/78‑108 (MQ=255)                                                                     ttATCTCTTCATCGTTGGTGAAAGAGGTGGCCCCACATCAGGGCTATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGATGGTATGCCATCCGGCGCGCATGAAt                                                                     <  1:391342/143‑1 (MQ=255)                                                                            ttCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGATGGTATGCCATCCGGCGCGCATGAATTACTTCt                                                              >  1:164429/1‑143 (MQ=255)                                                                            ttCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGATGGTATGCCATCCGGCGCGCATGAATTACTTCt                                                              >  2:346921/1‑143 (MQ=255)                                                                            ttCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGATGGTATGCCATCCGGCGCGCATGAATTACTTCt                                                              <  2:278813/143‑1 (MQ=255)                                                                              ctgcGTTGGTGAAGGAGGTGGCGCGCCATTGGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCTCGGTTGGCGAAGTTTGCGTAGCGTTTATGCCGGAGGGTATGCCATCCGGCGCGCATGAATTACTTCTgg                                                            <  2:567943/140‑1 (MQ=255)                                                                                 cGTTGGTGAAAGGGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGACGAAGTTAGCGTAGCGTTTATGCCGGATGGTATGCCATCCGGCGCGCATGAATTACTTCTGGCAc                                                         <  2:431601/143‑1 (MQ=255)                                                                                  gTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGATGGTATGCCATCCGGCGCGCATGAATTACTTCTGGCGCt                                                        >  2:449479/1‑143 (MQ=255)                                                                                        gAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGATGGTATGCCATCCGGCGCGCATGAATTACTTCTGGCACTGCCggc                                                  >  1:786502/1‑141 (MQ=255)                                                                                        gAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGATTATGCCGGATGGTATGCCATCCGGCGCGCATGAAGTCCTTCTGGCACTGGCGAc                                                  >  1:303336/1‑143 (MQ=255)                                                                                           agagGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGATGGTATGCCATCCGGCGCGCATGAATTACTTCTGGCACTGCCGACAAt                                               <  1:24256/143‑1 (MQ=255)                                                                                             tgggggCGCGCCATCACGGCGATGCCTCCCATTGCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCATGGCATGTCTGCCGGAGGGATCGCCACCCCGCGCGAATGAATTACTCCAGGCACCGCCGACAATaa                                             <  2:311915/139‑1 (MQ=255)                                                                                                 ggCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGATGGTATGCCATCCGGCGCGCATGAATTACTTCTGGCACTGCCGACAATAAAACg                                         >  1:253625/1‑143 (MQ=255)                                                                                                  gcgcgcCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGATGGTATGCCATCCGGCGCGCATGAATTACTTCTGGCACTGCCGACAATAAAACGt                                        >  1:315635/1‑143 (MQ=255)                                                                                                   cgcgcCGTCAGGGCGTGGTCACCCGTTTCCTGCCGGAGAATGGCCATCGGGCGCTGACGGCGAAGTTAGCGTAGCGTTTATGCCGGATGGTATGCCATCCGGCGCGCATGAATTACTTCTGGCACTGCCGACAATAAAACGtt                                       <  2:878048/143‑1 (MQ=255)                                                                                                                  atggcgcccATTGCCTGCCGGGGAATGTCCAGCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGATGGTATGCCATCCGGCGCGCATGAATTACTTCTGGCACTGCCGACAATAAAACGTTGCCCGCTGCGCATGt                        <  2:536258/137‑1 (MQ=255)                                                                                                                       aCCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGATGGTATGCCATCCGGCGCGCATGAATTACTTCTGGCACTGCCGACAATAAAACGTTGCCCGCTGCGCATGTTTAGt                   >  2:625484/1‑143 (MQ=255)                                                                                                                         ccATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATTCCGTATGGTATGCCATCCGGCGCGCATGAATTACTTCTGGCACTTCCGACAATAAAACGTTGCCCGCTGCGCCTGTTTAGTCg                 >  2:111365/1‑143 (MQ=255)                                                                                                                          cATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGATGGTATGCCATCCGGCGCGCATGAATTACTTCTGGCACTGCCGACAATAAAACGTTGCCCGCTGCGCATGTTTAGTCGc                <  1:692686/143‑1 (MQ=255)                                                                                                                                    cGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGATGGTATGCCATCCGGCGCGCATGAATTACTTCTGGCACTGCCGACACTAAAACGTGCACCGCTTCGCATGTTTAGTCGCCACAATCTGc      >  2:411036/1‑143 (MQ=255)                                                                                                                                        gaATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGATGGTATGCCATCCGGCGCGCATGAATTACTTCTGGCACTGCCGACAATAAAACGTTGCCCGCTGCGCATGTTTAGTCGCCACAATCGGCGTAc  <  1:887583/143‑1 (MQ=255)                                                                                                                                        gaATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGATGGTATGCCATCCGGCGCGCATGAATTACTTCTGGCACTGCCGACAATAAAACGTTGCCCGCTGCGCATGTTTAGTCGCCACAATCGGCGTAc  >  1:456582/1‑143 (MQ=255)                                                                                                                                              |                                                                                                                                         GCATATGAATCGCCACTTAATGCCGGAACTGGAAAGTGTGTTTCTGATGCCGTCGAAAGAGTGGTCGTTTATCTCTTCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAGCGTTTATGCCGGATGGTATGCCATCCGGCGCGCATGAATTACTTCTGGCACTGCCGACAATAAAACGTTGCCCGCTGCGCATGTTTAGTCGCCACAATCGGCGTAC  >  NC_000913/3810133‑3810410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.