| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1456809 = | 41 (0.870) | 3 (0.060) | 3/260 | NT | 7.2% | coding (380/1071 nt) | paaE | phenylacetyl‑CoA 1,2‑epoxidase, reductase subunit |
| ? | NC_000913 | 1456830 = | 37 (0.790) | coding (401/1071 nt) | paaE | phenylacetyl‑CoA 1,2‑epoxidase, reductase subunit | |||||
CATCCGCCAGGGTATGACGCTGGAGGTCATGGTGCCGCAGGGGCATTTCGGCTATCAGCCGCAGGCCGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGATGTTTCGCCAGGCACTGGCAGACCTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCA > NC_000913/1456690‑1456968 | ctgtaaacgctgaggatatttgtctttcaggtctgccagtgcctggcgaaacatcttgctctggctggtacggttaccgtagatcagggtgaactgactttcaggctcggtttgtaaagTGGTGGCGATTATCGCCACCACtt > 1:64418‑M1/120‑143 (MQ=255) aTCCGCCAGGGTATGACGCTGGAGGTCATGGTGCCGCAGGGGCATTTCGGCTATCAGCCGCAGGCCGAACGCCAGGGGCGCTATCTGGCAATTGTAGCAGGATCAGGTATCACGCCACTGCTGGCGATTATCGCCACCACttt > 2:52810/1‑143 (MQ=255) tCCGCCAGGGTATGACGCTGGAGGTCATGGTGCCGCAGGGGCATTTCGGCTATCAGCCGCAGGCCGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTa < 2:684539/143‑1 (MQ=255) tCCGCCAGGGTATGACGCTGGAGGTCATGGTGCCGCAGGGACATTTCGGCTATCAGCCGCAGGCCGAACGCCAGGGGCGCTATCTGGCACTTGCAACATGATCAGGTATTGAGCCAATTCGGGCGATTATCGCCACCACTTTa > 1:587120/1‑143 (MQ=255) gACGCTGGAGGTCATGGTGCCGCAGGGGCATTTCGGCTATCAGCCGCAGGCCGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTCTCGCCACCACTTTACAAACCGAGcccg > 1:911584/1‑141 (MQ=255) gCTGGAGGTCATGGTGCCGCAGGGGCATTTCGGCTATCAGCCGCAGGCCGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGaaa < 1:236455/143‑1 (MQ=255) gCTGGAGGTCATGGTGCCGCAGAGGCATTGCGGCGATCAGCCGCAGGCCGAACGGCAGGGGCGCTATCTGGCAAATGCAGCAGGATCAGGCATTAAGCCAATGGTGGCGATGATCGCCACCACTTTACAAACCGAGCCTGaaa > 2:560213/1‑143 (MQ=255) gAGGTCATGGTGCCGCAGGGGCATTTCGGCTATCAGCCGCAGGCCGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACGACTTTACAAACGGAGCCGGAAAGGCa > 1:655876/1‑143 (MQ=255) tCATGGTGCCGCAGGGGCATTTCGGCTATCAGCCGCAGGCCGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTc > 1:333959/1‑143 (MQ=255) aTGGTGCCGCAGGGGCATTTCGGCTATCCGCCGCAGGCCGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCAc < 1:829082/143‑1 (MQ=255) gCCGTAGTGGCATTCTGGCTATCAGCGGACGGCCGAACCGCAGGTGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGACGATTATCGCCACAACTTTACAAACCGAGCATGAAAGTCAGTTCACCCTGa < 2:536210/143‑1 (MQ=255) gCCGCAGGGGCATTTCGGCTATCAGCCGCAGGCCGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGa < 1:595046/143‑1 (MQ=255) gcGCAGGGGCATTTCGGCTATCAGCCGCAGGCCGAACGCCAGGGGCGCTATCTGGCGATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGAt < 2:577952/142‑1 (MQ=255) ccGCAGGGGCAGTTCGGCTATCAGCCGCAGGCCGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGAt < 2:718864/143‑1 (MQ=255) cAGGGGCATTTCGGCTATCAGCCGCAGGCCGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTa < 1:176587/143‑1 (MQ=255) ggggCATTTCGGCTATCAGCCGCATGCCGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACg < 2:157463/143‑1 (MQ=255) atctCGGCTATCAGCCGCAGCCCGAACGCCAGGGGCGCTATCTGCCAATTGCAGCAGGATCAGGTATTACGCTAATGCTGTCTATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAAc < 1:442944/140‑1 (MQ=255) atcatgctctggctggtacggttaccgtagatcagggtgaactgactttcaggctcggtttgtaaagTGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGaaa < 2:179873‑M1/42‑1 (MQ=255) atcatgctctggctggtacggttaccgtagatcagggtgaactgactttcaggctcggtttgtaaagTGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGaaa > 1:179873‑M1/68‑109 (MQ=255) aTCAGCCGCAGGCCGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTAccagc < 2:697585/143‑1 (MQ=255) aGCCGCAGGCCGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTAccagccag > 1:767965/1‑143 (MQ=255) ccGCAGGCCGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTCCCAGCCagag > 2:698338/1‑143 (MQ=255) ccGCAGGCCGAACGCCAGGGGCGCTATCTGGCAAGTGCCGCAGGATCAGGTATTACGCCAACGCTGGCGATTATCGCCACCACTTTACCAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTAccggccagcg > 2:338229/1‑141 (MQ=255) gCCGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGa < 1:786408/89‑1 (MQ=255) gCCGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGa > 2:786408/1‑89 (MQ=255) cGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGAACACCGGTAAGCGTAGAAGCCACAGCATGATGt > 2:558188/1‑143 (MQ=255) aaCGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGATGttt < 1:873791/143‑1 (MQ=255) cGCCAGTGGCTCTAGCTGGCAATTGCAGCAGGAGCAGGTACTACGCCAATGCTGGCGATTATCGCCACCACTTTACGAACCGAGCCTGAAAGTCAGTTCACCCTCATCTACGGTAACCGTACCAGCCAGAGCATGATGTTTCg < 1:193835/143‑1 (MQ=255) cAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGATGTTTCGCCa > 2:91049/1‑143 (MQ=255) cAGGGGCGCTATCTGGCAATTGCAGCAGGAGCAGGTATCACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGATGTTTCGCCa < 1:787385/143‑1 (MQ=255) agcggCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCACTGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGATGTTTCGCCAg < 1:841692/140‑1 (MQ=255) gggCGCGATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGATGTTTCGCCAGGc < 2:293684/143‑1 (MQ=255) gcgcTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGATGTTTCGCCGGGCAc > 2:607102/1‑143 (MQ=255) cTATCGGGCAATTGCAGGTGGATCAGGTAGTACGCCAATGTTGGCGATTATCGCCACCACTTTACAAACCGCGCCTGAAAGTCAGTTCACCCTGATCGACGGTAACCGTACCAGCCAGAGCATGATGTTTCGCCAGGCACTgg < 2:285117/143‑1 (MQ=255) tCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGCTGTTTCGCCAGGCAccgcccg > 1:763018/1‑137 (MQ=255) ggCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTGTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCGTGATGTTTCGCCAGGCACTGGCAGAcc > 1:269999/1‑143 (MQ=255) cAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGATGTTTCGCCAGGCACTGGCAGACCTg < 1:91049/143‑1 (MQ=255) aTTGCAGCAGGATCAGGTATTACGCCCATGCTGGCGATTATCGCAACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGATGTTTCGCCAGGCACTGGCAGACCTGaa < 2:705872/143‑1 (MQ=255) tttcaggctcggtttgtaaagtggtggcgataatcgccagcaCTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCatgat > 1:179873‑M2/43‑109 (MQ=255) tttcaggctcggtttgtaaagtggtggcgataatcgccagcaCTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCatgat < 2:179873‑M2/67‑1 (MQ=255) ggTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATTTACGGTAACTGTACCAGCCAGAGCATGATGTTTCGCCAGGCACTGGCAGACCTGAAAGACAAATATCCTCa < 1:777230/143‑1 (MQ=255) tACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGTTCTACGGTAACCGTACCAGCCAGAGCATGATGTTTCGCAAGGCACTGGCAGACCTGAAAGACAAATATCCGCAGCgca > 2:593556/1‑141 (MQ=255) aCGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGATGTTTCGCCAGGCACTGGCAGACCTGAAAGACAAATATCCTCAGCGttt < 1:622017/143‑1 (MQ=255) ccAATGCTGGCGATTAGCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGATGTTTCGCCAGGCACTGGCAGACCTGAAAGACAAATATCCTCAGCGTTTACa < 2:383299/143‑1 (MQ=255) aagtggtggcgataatcgccaccaCTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCAAGATGTTTCGCCAGGCACTGGCAGACCTGAAAGACAAATATCCTCAGCGTTTACAg > 1:64418‑M2/25‑143 (MQ=255) TGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGATGTTTCGCCAGGCACTGGCAGACCTGAAAGACAAATATCCTCAGCGTTTACAgttg > 1:402015‑M1/1‑143 (MQ=255) gATTATCGCCACCACTTTACAAACCGAGCCTGCAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAACCAGAGCATGATGTTTCGCCAGGCACTGGCAGACCTGAAAGACAAATATCCTCAGAGTTTACAGTTATTGTGCa > 2:67853/1‑143 (MQ=255) ccacccGTTGACAAACCGGGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGATGTTTCGCCAGGCACTGGCAGACCTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTtcagt < 2:433003/143‑1 (MQ=255) ccaccaCTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGATGTTTCGCCAGGCACTGGCAGACCTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTtcagt < 1:619404/143‑1 (MQ=255) ccaccaCTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGATGTTTCGCCAGGCACTGGCAGACCTGAAAGACAAAGATACTCCGCGGTTACAGGTGTTGTGCATTTtgagt > 2:512724/1‑143 (MQ=255) accacTTTACAGACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGATGCTTAGCCAGGCACTGGCAGACCTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTtcagtca < 2:710833/143‑1 (MQ=255) | CATCCGCCAGGGTATGACGCTGGAGGTCATGGTGCCGCAGGGGCATTTCGGCTATCAGCCGCAGGCCGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGATGTTTCGCCAGGCACTGGCAGACCTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCA > NC_000913/1456690‑1456968 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |