New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1621763	47 (0.990)	4 (0.090)	4/258	NT	7.8%	coding (432/1188 nt)	ydeE	dipeptide exporter
	?	NC_000913	= 1621777	48 (1.040)					coding (446/1188 nt)	ydeE	dipeptide exporter

TTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGTAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTC  >  NC_000913/1621636‑1621919                                                                                                                                              |                                                                                                                                               ttgttGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTccg                                                                                                                                               <  1:136692/140‑1 (MQ=255)  ttttGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCAAGCAGTCGTTCGTCCACCAGCAAAACGAAAATCGTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCgc                                                                                                                                              >  1:938794‑M2/1‑141 (MQ=255)          tCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGACAATCTTTCGTCCCCCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGc                                                                                                                                      >  1:159017/1‑143 (MQ=255)               aaCTGCGCCTATTCTGTTTTTTTTTTTTTTTTTTAAGCCTGGTTTGCCGACACTCTTTTGTCTACTTGCACAACGAAAATCTTCTCTATCTACTACACCATGCTACACCTTGGCTGGACCTTTGTTCCGCCGCTCGGccccct                                                                                                                                 >  2:176142/1‑138 (MQ=255)                   gcgcCTATTCGGTTTTTGCTACCGCGCTGAAAGCCTGGATTGCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCCACTACACCATGCTAATCAACGAATACACCGTCGGTCCGCCGCTCGGCACGCTGTTg                                                                                                                             <  2:773191/143‑1 (MQ=255)                              gTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCGGTTGGTAATGCagag                                                                                                                  >  1:98510/1‑143 (MQ=255)                               tttttGCTACCGTGCTGAAAGCCTGGTTTGCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCAGCGGTCCGCCGCTCGGCACGCTGTTGGTCATGCAGAGc                                                                                                                 >  1:173998/1‑143 (MQ=255)                                     cTACCGTGCTGAAAGCCTGGTTTGCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAAt                                                                                                           <  2:54849/143‑1 (MQ=255)                                       aCCGTGCTGAAAGCCTTGTTTTCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACTCCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCt                                                                                                         <  2:516689/143‑1 (MQ=255)                                        ccGTGCTGAAAGCCTGGTTTGCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTg                                                                                                        <  1:663986/143‑1 (MQ=255)                                         cGTGCTGAAAGCCTGGTTTGCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTACACATTGGCTGGACCATCGGTCCGCCGCCCGGCACGCTGTTGGTACTGCTGAGCCTCAATCTGc                                                                                                       >  1:930440/1‑143 (MQ=255)                                         cGTGCTGAAAGCCTGGTTTGCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCACGGCACGCTGTTGGTAATGCAGCGCGTCAATCTGc                                                                                                       >  2:245952/1‑143 (MQ=255)                                         cGTGCGGAAAGCTTGTTTGGCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGc                                                                                                       <  1:124534/143‑1 (MQ=255)                                             cTGAAAGCCTGGTTTGCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTCTTGGTAATGCAGGGCATCAATCTGCCCtt                                                                                                   >  1:219785/1‑143 (MQ=255)                                              tGAAAGCCTGGTTTGCCGACAATCTTTCGGCCACCAGCAAAACGAAGATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTACGCCGCTCGGCACGCGGTTGGTAGGGCAGAGCATCAATGTGCCCTTc                                                                                                  >  2:46642/1‑143 (MQ=255)                                                aaaGCCTGGTTTGCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCCTctg                                                                                                >  2:1137/1‑143 (MQ=255)                                                  aGCCTGGTTTGCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGCCCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGACCTTctggc                                                                                              >  2:186643/1‑143 (MQ=255)                                                    ccTGGTTTGCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTctggctg                                                                                            >  1:696467/1‑143 (MQ=255)                                                      tGGTTTGCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCtgaatggc                                                                                          >  1:107026/1‑143 (MQ=255)                                                       gctttGCCGACAATCTTTCGTTCACCAGCAAAACGAAAATCTTCTCAATCATCGACACCATGCTAAACGTTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCa                                                                                         <  2:148244/141‑1 (MQ=255)                                                        gTTTGCCGACAATATTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAg                                                                                        <  2:869057/143‑1 (MQ=255)                                                              cGACAATCTTTCGTCCACTAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAATCATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCt                                                                                  <  2:502591/143‑1 (MQ=255)                                                               gACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGTATCAGTCTGCCCTCCTGACTGGCAGCTATCTg                                                                                 >  2:702054/1‑143 (MQ=255)                                                                  aaTCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGACTGGACCATCGGTCCGCCGCTCGTCACGCTGTTGGTCATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTc                                                                              >  1:10283/1‑143 (MQ=255)                                                                     cgttCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTGCACCATGCTAAACATTGGCCGGACCGTCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCcgc                                                                           <  1:939057/141‑1 (MQ=255)                                                                      tttCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAGTGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCcgcg                                                                          <  1:901070/143‑1 (MQ=255)                                                                          gTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTc                                                                      <  2:674781/143‑1 (MQ=255)                                                                           tCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTCCCCCTCTGGCTGGCAGCTATCTGTTCCGCGTTTcc                                                                     >  2:528411/1‑143 (MQ=255)                                                                              accaGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCGCTTCCGCGTTTCCAAt                                                                  >  1:457733/1‑143 (MQ=255)                                                                              accaGCAAAACGAAAATCTGCGCGCTCAACGACTCCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCTGCACGCTGTTGGTAATGCTGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCAt                                                                  <  2:103467/143‑1 (MQ=255)                                                                                caGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGc                                                                >  1:802129/1‑143 (MQ=255)                                                                                  gCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCtt                                                              >  1:224178/1‑143 (MQ=255)                                                                                         gAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTACTGCAGAGCATCAATCTGCCCTCCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTttcattc                                                       >  1:687596/1‑143 (MQ=255)                                                                                         gAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTttcattc                                                       >  1:406510/1‑143 (MQ=255)                                                                                         gAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCGATCTGTTCCGCGTTTCCCATGCTTttccttc                                                       >  1:48470/1‑143 (MQ=255)                                                                                          aaaaTCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTACGCCGCTCGGCACGGTGTTGGTAATGCAGAGCATCAGTCTGCCCTTCTGGCTGGCGGCTATCTGTTCCGCGTTTCCTATGCTTttcattca                                                      >  1:118001/1‑143 (MQ=255)                                                                                               cttctCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCGCTTATGGCTGGGAGCTCTCTGTTCCGGGTGTCCGATGCTGTTCATTTGAAttt                                                 >  1:212796/1‑143 (MQ=255)                                                                                                tcctcAATCAACTCCACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTg                                                <  1:655329/141‑1 (MQ=255)                                                                                                ctctcAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTg                                                <  1:634348/142‑1 (MQ=255)                                                                                                 tctcAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCgccaatgtttagcatggtgtagttgattgagaagattttcgttttgctggtggacgaaagattgtcggcaaaccaggctgtcagcacggtagcaaaa                                               <  2:228395‑M2/143‑98 (MQ=255)                                                                                                  ctcAATCAACTGCTCCATGCTAAACGTTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAACGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTggg                                              <  2:278888/143‑1 (MQ=255)                                                                                                    caatcaaCTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAGTTTGGGTa                                            >  1:656182/1‑143 (MQ=255)                                                                                                     aatcaaCTACACCATGCTAAACATTGGCTGGACCATCGGTCCgccaatgtttagcatggtgtagttgattgagaagattttcgttttgctggtggacgaaagattgtcggaaaaccaggctttcggcgcggtagcaaaaacag                                           <  2:136748‑M2/143‑102 (MQ=255)                                                                                                       tcaaCTACACCATGCTAAACATTGGCTGGACCATCGGTCCagccaatgtttagcattgtgtagttgattgagacgattttcgttttgctggtggacgaaggattgtcggcaaaccaggctttcggacaggtagcaaaaacaga                                         <  2:180083‑M2/143‑104 (MQ=255)                                                                                                       tcaaCTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCGTCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCATATTTGGGTAAAg                                         >  1:882491/1‑143 (MQ=255)                                                                                                                 cATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGTAAAGCGCAGCgaga                               >  1:494609/1‑143 (MQ=255)                                                                                                                     cTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCGATCTGCCCTTCTGGCTGGCGGCTATCTGTTCCGCGTTGCCCATGCTTTGCAGTCAAGTTTGGGTAAGGCGCAGCGAGaaagt                           >  2:137747/1‑141 (MQ=255)                                                                                                                     cTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTGTCCCATGCTGTTCATTTCAATTTGGGTAAGGCGCAGCgacgacat                           >  2:137750/1‑137 (MQ=255)                                                                                                                       aaaCATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCCGCTGTCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGTAACGCGCAGCGAGACAatca                         >  2:817612/1‑143 (MQ=255)                                                                                                                        aaCATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATGAGGGTAAAGCGCCGCGAGAAAatcat                        >  2:754990/1‑143 (MQ=255)                                                                                                                             tGGCTGGACCATCGGTCCagccaatgtttagcatggtgtagttgattgagaagattttcgttttgctggtggacgaaagattgtcggcaaaccaggctttcagcacggtagcaaaaacagaataggcgcagttcatgagggca                   <  1:230274‑M2/143‑126 (MQ=255)                                                                                                                              ggCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGTAAAGCGCAGCGAGAAAATCATCGCCAc                  <  1:824671/143‑1 (MQ=255)                                                                                                                               gCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTCTCCCATGCTTGTCATACAAATTTGGGTAAAGCGCAGCGAGAAAATCATCGCCACg                 >  2:680304/1‑143 (MQ=255)                                                                                                                                        tCGGTCCGCCGCGAGGCGCGCTGTGGGTAATGCAGAGCATCAGTCTGCCCTTCTGGCTGGCAGCTATCGGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGTAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGc        <  1:155819/143‑1 (MQ=255)                                                                                                                                           gTCCGCCGCTCGGCACGATGGTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTGTTCATTCAAATTTGGGTAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAgt     <  2:931601/143‑1 (MQ=255)                                                                                                                                              cgccgcTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCACATTTGGGTAAAGCGCAGCGAGAAAATCATCGCCACGGCAACAGGCAgtgcc  >  1:616810/1‑141 (MQ=255)                                                                                                                                              |                                                                                                                                               TTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGTAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTC  >  NC_000913/1621636‑1621919

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.