New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3161672	53 (1.120)	3 (0.060)	3/258	NT	5.3%	coding (998/1413 nt)	ftsP	cell division protein required during stress conditions
	?	NC_000913	= 3161700	55 (1.190)					coding (970/1413 nt)	ftsP	cell division protein required during stress conditions

TCCATTAATACCCGGGTCATCACCCAGACTGATATCGCGACTGCGAATTGGCGAACCAGCCATGATTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCATCGCCGTTGCTCATATCCACCAGAATCTCGCGGCGCTCG  >  NC_000913/3161572‑3161842                                                                                                                                 |                                                                                                                                               tCCATTAATACCCGGGTCATCACCCAGACTGATATCGCGACTGCGAATTGGCGAACCAGCCATGATTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGTGCGCAGCGTTAGCAccc                                                                                                                                  >  1:193615/1‑142 (MQ=255)  ccATTAGTCCCCGGGTCAGCGCCCAGGCTGATATCGCGACTGCGAATTGGCGAACCAGCCATGATTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAg                                                                                                                                 <  1:295421/143‑1 (MQ=255)  ccATTAATACCCGGGGCATCACCCAGACTGATATCGCGACTGCGAATTGGCGAACCAGCCATGATTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAg                                                                                                                                 <  1:877000/143‑1 (MQ=255)   cATTAACACCCGGCTCATCACCCAGACTGATATCGCGACTGCGAATTGGCGAACCAGCCATGATTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAgg                                                                                                                                <  1:279867/143‑1 (MQ=255)           cccGGGTCATCACCCAGACTGATATCGCGACTGCGAATTGGCGAACCAGCCATGATTTCAGTTGGCAGCCAGCGGATCGGAAGACTGTCTGTGACGAGCGGCCGAAGGCAGGGTGGGCGCAGCGTTGGGACGAGGGGAGGAAc                                                                                                                        >  2:855332/1‑143 (MQ=255)           cccGGGTCATCACCCAGACTGATATCGCGACTGCGAATTGGCGAACCAGCCATGATTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAAc                                                                                                                        <  2:379491/143‑1 (MQ=255)           cccGGGTCATCACCCAGACTGATATCGCGACTGCGAATTGGCGAACCAGCCATGATTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAAc                                                                                                                        <  1:580100/143‑1 (MQ=255)            ccGGGTCATCACCCAGACTGATATCGCGACTGCGAATTGGCGAACCAGCCATGATTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACAAGGGTAGAAAcc                                                                                                                       >  1:541051/1‑143 (MQ=255)             cGGGGCATCACCCAGGCTGATATCGCGACTGCGGATGGGCGAACCAGCCATGATTTCAGTTGGTGGCCAGCTCACCAGAAGAGTTTCGGTGACCAGCGGCAGAAGGCGGGTTGGGCGGAGCGTTAGCACCAGGGTAGAAACCa                                                                                                                      <  1:435702/143‑1 (MQ=255)                gTCATCACCCTGGCTGATATCGCGACTGCGAATTGGCGAACCAGCCATGATTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGaa                                                                                                                   <  2:312342/143‑1 (MQ=255)                   atcaCCCAGACTGATATCGCGACTGCGAATTGGCGAACCAGCCATGATTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCCCCAGGGTAGAAACCAGAATAc                                                                                                                >  1:422055/1‑143 (MQ=255)                     caCCCAGACTGATATCGCGACTGCGAATTGGCGAACCAGCCATGATTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTg                                                                                                              <  1:899268/143‑1 (MQ=255)                          aGACTGATATCGCGACTGCGAATTGGCGAACCAGCCATGATTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATgg                                                                                                         >  1:847388/1‑143 (MQ=255)                                atatCGCGACTGCGAATTGGCGAACCAGCCATGATTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCaaa                                                                                                   <  1:823937/143‑1 (MQ=255)                                   tCGCGCGTGCGAATTGGCGACCCAGCCATGATTTCAGTTGGCAGCAAGCGCATCGGACGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGTCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAaagaa                                                                                                <  2:527439/143‑1 (MQ=255)                                   tCGCGACTGCGAATTGGCGATCCAGCCATGATTTCAGTTGGCAGTAAGCGCATCGTAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAaagaa                                                                                                <  2:398105/143‑1 (MQ=255)                                   tCGCGACTGCGAATTGGCGAACCAGCCATGATTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAacgaa                                                                                                >  1:694840/1‑143 (MQ=255)                                      cgACTGCGAATTGGCGAACCAGCCATGATTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAGGAAGcc                                                                                             >  1:62715/1‑143 (MQ=255)                                      cgACTGCGAATTGGCGAACCAGCCATGATTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGATCAAAGAAGcc                                                                                             >  1:506297/1‑143 (MQ=255)                                        aCTGCGGATTGGCGGACCAGCCATGATTTCAGTTGGCAGCCAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCAc                                                                                           <  1:178196/143‑1 (MQ=255)                                          gcggAATTTGCGTACCGGCGATGATTTCATGTGGCTGCAAGCGCATCGGACGACTGTCTGTGACCACGGGTGTATTGCCGGTTGGGCGCAGCGTTAGAACCAGGGTAGAAACCATAATACTTGATGGCTCAAAGAAGCCACGa                                                                                         <  2:283113/140‑1 (MQ=255)                                           gCGAGTGGGCGAGCCGGCCATGGTGTCAGTGGGCGGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGaa                                                                                        <  2:632821/143‑1 (MQ=255)                                                 tGGCGAACCAGCCATGAGTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGAt                                                                                  <  2:576258/143‑1 (MQ=255)                                                     gcaccaccCCTGATTTCAGCTGGCAGCAAGCGCCTCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGCCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATcaac                                                                              <  2:87228/141‑1 (MQ=255)                                                        ccAGCCATGATTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAGCAAt                                                                           >  1:194008/1‑143 (MQ=255)                                                         cAGCCATGATTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATg                                                                          <  1:815241/143‑1 (MQ=255)                                                           gCCATGATTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATCCCCTCAACCATGCt                                                                        >  1:662216/1‑143 (MQ=255)                                                                   tgcAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGCGGCAGCGTTAGCACCAGGGAAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATAAACAATGCTCACCGCtc                                                                >  2:889960/3‑142 (MQ=255)                                                                    tCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAGACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTc                                                               >  2:563234/1‑143 (MQ=255)                                                                     cAGTGGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGGAGAAACCAGAATACTGGATGGCTCAAATAAGCCACGAATACGATCAACAATGCTCGCCGCTTCg                                                              <  1:606617/143‑1 (MQ=255)                                                                          ggCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTCGGCGCAGCGTTAGCACCACGGTAGAAACCAGAATACTGGATGGCTCAAACAAGCCCCGAATACGACCAACAACGCCCCCCGCCTCCCcacc                                                         >  2:921122/1‑142 (MQ=255)                                                                             agcaAGCGCATCGGAAGACTGTCTGTGACCGGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAGAGAAGCCACGAATACGATCAACAAGGCTCGCCGCCTCGCCGCAGGt                                                      >  2:753035/1‑143 (MQ=255)                                                                                gaGCGCATCGGAGGCCGGGCGGTGACCAGCGGGAGAGGGCCGGTTGGGCGCAGCGTGAGCACCAGGGCAGAAACCAGAAGACTGGATGGCGCGAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGAt                                                   <  2:135804/142‑1 (MQ=255)                                                                                 ggtgcATCGGAGGACGGTCTGGGAGCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATc                                                  <  2:524027/140‑1 (MQ=255)                                                                                        cGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACtt                                           <  1:499682/143‑1 (MQ=255)                                                                                          gAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAACGCAGCCACGAATACGCTCAACAATGCTCGCCGCTTCCCCACAGGTGATCGACCCATCa                                         >  2:223761/1‑143 (MQ=255)                                                                                          gAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCGTCGCCACAGGTGATCGACACTTCa                                         >  1:729111/1‑143 (MQ=255)                                                                                           aaGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCAt                                        >  1:443282/1‑143 (MQ=255)                                                                                            agtctgtcgggGACCAGCGGTAGAGGGGCGGTTGGGCGCAGCGTGAGCACCAGGGTAGAAAGCAGAATACGGGATGGCTCAAAGAAGCCACGAATATGATGAACAATGCTCGCCGCTTCGGCACAGGTGATCGACACTTCATc                                       <  2:587524/140‑1 (MQ=255)                                                                                              aCTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCATCGc                                     >  1:445975/1‑143 (MQ=255)                                                                                              aCTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCATCGc                                     >  1:849630/1‑143 (MQ=255)                                                                                                 gtctgtGACCAGCGGCAGAAGGCCGGTTGGGCGcagacagtcttccgatgcgcttgctgccaactgaaatcatggctggttcgccaattcgcagtcgcgatctcagtctgggtgatgacccgggtcttaatggaccgctgtgg                                  <  2:382101‑M2/143‑111 (MQ=255)                                                                                                  tctgtGACCAGCGGCAGAAGGCCGGTTGGGCGcagacagtcttccgatgcgcttgctgccaactgaaatcatggctggttcgccaattcgcagtcgcgatatcagtctgggtgatgacccgggtattaatggacagctgtggg                                 <  1:262391‑M2/143‑112 (MQ=255)                                                                                                    tgtgACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCATCGCCGTTGc                               >  1:821516/1‑143 (MQ=255)                                                                                                     gtgACCAGCGGCAGAAGGCCGGTTGGGCGcagacagtcttccgatgcgcttgctgccaactgaaatcatggctggttcgccaattcgcagtcgcgatatcagtctgggtgatgacccgggtattaatggacagctgtgggccg                              <  1:365637‑M2/143‑115 (MQ=255)                                                                                                     gtgACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCCCAGGTGATCGACACTTCATCGACGTTGcg                              >  2:73068/1‑142 (MQ=255)                                                                                                      tgACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAAAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCACCGCCGTTGCtg                             >  1:350955/1‑142 (MQ=255)                                                                                                       gACCGGCGGCAGAAGGGCGGTTGGGCGCGGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAAGACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCATCGCCGTTGCTCa                            <  2:560837/143‑1 (MQ=255)                                                                                                        agcAGGGGCAGAAGGCCGGTTGGGCGCAGCGCTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCATCGCCGTTGCTCat                           <  1:45558/141‑1 (MQ=255)                                                                                                        aCCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGCATACGATCAACAATGCTCGCCGCTCCGCCACAGGTGATCGACACTTCATCCCCGTTGCTCat                           >  2:595157/1‑143 (MQ=255)                                                                                                         ccAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATCCTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCATCGCCGTTGCTCata                          <  1:303159/143‑1 (MQ=255)                                                                                                         ccAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCATCGCCGTTGCTCatc                          >  1:790419/1‑142 (MQ=255)                                                                                                                cAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCATCGCCGTTGCTCATATccacca                   >  1:93254/1‑143 (MQ=255)                                                                                                                 aGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCATCGCCGACGCTCATATCCACCAg                  >  2:316300/1‑143 (MQ=255)                                                                                                                 aGAAGGCCCGTTGGGCGCAGCGTTAGCACCAGGCTAGAACCCAGATTACTGGATGGCTCAAAGAAGCCATGAATACCATCAACAATGCTCGCCGCTTCGCCACACGTGATCGACACTTCATCGCCGTTGCTCATATCCACCAg                  <  2:50087/143‑1 (MQ=255)                                                                                                                  gAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCATCGCCGTTGCTCATATCCACCAGa                 <  2:849630/143‑1 (MQ=255)                                                                                                                        cGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCATCGCCGTTGCTCATATCCACCAGAATCTcg           >  1:550312/1‑143 (MQ=255)                                                                                                                          gTTGGTCGGAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCAGCGCCGTTGCTCATATCCACCAGAATCTcgcg         <  2:392456/143‑1 (MQ=255)                                                                                                                               gcgcAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCATCGCCGTTGCTCATATCCACCAGAATCTCGCGGCGCt    <  1:833757/143‑1 (MQ=255)                                                                                                                               gcgcAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCATCGCCGTTGCTCATATCCACCAGAATCTCGCGGCGCt    >  1:926058/1‑143 (MQ=255)                                                                                                                                 gcAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCATCGCCGTTGCTCATCTCCACCAGACTCTCGCGGCtctcc  >  1:371455/1‑142 (MQ=255)                                                                                                                                 |                                                                                                                                               TCCATTAATACCCGGGTCATCACCCAGACTGATATCGCGACTGCGAATTGGCGAACCAGCCATGATTTCAGTTGGCAGCAAGCGCATCGGAAGACTGTCTGTGACCAGCGGCAGAAGGCCGGTTGGGCGCAGCGTTAGCACCAGGGTAGAAACCAGAATACTGGATGGCTCAAAGAAGCCACGAATACGATCAACAATGCTCGCCGCTTCGCCACAGGTGATCGACACTTCATCGCCGTTGCTCATATCCACCAGAATCTCGCGGCGCTCG  >  NC_000913/3161572‑3161842

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.