Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 710,595 | G→T | 100% | P18T (CCT→ACT) | fur ← | DNA‑binding transcriptional dual regulator Fur |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 710,595 | 0 | G | T | 100.0% | 120.4 / NA | 40 | P18T (CCT→ACT) | fur | DNA‑binding transcriptional dual regulator Fur |
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (25/15); total (25/15) | |||||||||||
Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
GTCGTCAAACTGGTTCAGTACGCGATATACCGTAGCCAGACCAATTTCTTCACCCATATCGATCAGACGTTTGTATAAATCTTCCGCACTGACGTGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGTCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATTATA > NC_000913/710455‑710729 | gtcgtcAAACTGGTTCAGTACGCGATATACCGTAGCCAGACCAATTTCTTCACCCATATCGATCAGACGTTTGTATAAATCTTCCGCACTGACGTGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTaa > 1:237959/1‑143 (MQ=255) gtcgtcAAACTGGTTCAGTACGCGATATACCGTAGCCAGACCAATTTCTTCACCCATATCGATCAGACGTTTGTATAAATCTTCCGCACTGACGTGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTaa > 2:506781/1‑143 (MQ=255) tGGTTCAGTACGCGATATACCGTAGCCAGACCAATTTCTTCACCCATATCGATCAGACGTTTGTATAAATCTTCCGCACTGACGTGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTAAGCGTTACttt > 1:939829/1‑143 (MQ=255) gTTCAGTACGCGATATACCGTAGCCAGACCAATTTCTTCACCCATATCGATCAGACGTTTGTATAAATCTTCCGCACTGACGTGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAGCGAGTAAGCGGTACTTTCa > 1:411596/1‑143 (MQ=255) tACGCGATATACCGTAGCCAGACCAATTTCTTCACCCATATCGATCAGACGTTTGTATAAATCTTCCGCACTGACGTGATGGTTGTCCGGCTCCTGCAGAACTTCCAGGATTTCTGAATGCGTAAGCGGCACCTCCAGGCCac > 1:26565/1‑142 (MQ=255) gttataGCGTATCCAGGCGAATTTCTTCACCCATATCGATCAGACGTTTTTATAAATCTTCCACACTGACGTGATGATTGTGCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGctttc < 1:311233/141‑1 (MQ=255) atatACCGTAGCCCGACCAATTTCTTCACCCATATCGATCCGACGTTTGTATAAATCTTCCGCACTGACGTGATGGTTGTCCGGCTCCTGCAGAACTTCCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGctttct < 2:945997/143‑1 (MQ=255) taCCGTAGCCAGACCAATTTCTTCACCCATTTCGATCAGTCGTTTGTATAAATCTTCCGCACTGACGTGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTa < 2:456407/143‑1 (MQ=255) ccGTAGCCAGACCAATTTCTTCCCCCATATCGAACAGCCGTCTGTTAAAATCGTCCACAAAAGAGTGGTGGTTGTCCGGCTCCTGAACCCCGTCCAGGATTTTTAATCTAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAgg < 1:840771/143‑1 (MQ=255) cGTAGCCAGACCAATTTCTTCACCCATATCGATCAGACGTTTGTATAAATCTTCCGCACTGACGTGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAggg < 2:534526/143‑1 (MQ=255) gTAGCCAGACCAATTTCTTCACCCATATCGATCAGACGTTTGTATAAATCTTCCGCACTGACGTGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTTAGCGTTACTTTCAGGCCAGCATTCTTTAGGGc > 1:396256/1‑143 (MQ=255) tAGCCAGACCAATTTCTTCACCCATATCGATCAGACGTTTGTATAAATCTTCCGCACTGACGTGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCg < 1:99377/143‑1 (MQ=255) ccAGACCAATTTCTTCACCCATATCGATCAGACGTTTGTATAAATCTTCCGCACTGACGTGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTACGCGTTACTCTCAGGCCAGCTTTCTTTAGGGCGGTa > 2:888699/1‑143 (MQ=255) aCCAATTTCTTCACCCATATCGATCAGACGTTTGTATAAATCTTCCGCACTGACGTGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTGGGGCGGTATTGt > 1:116339/1‑143 (MQ=255) aCCAATTTCTTCACCCATATCGATCAGACGTTTGTATAAATCTTCCGCACTCACGTGATGGTTGTCCGGCTCCTGAAGAACTTCCCGGATTTTTAAGCGAGTAACCGTTACTTTCAGGACCGCTTTCTCTAGAGCGGAATTGt > 2:451933/1‑143 (MQ=255) aaTTTCCTCACCCATGTCGATCAGACGTTTGTATAAATCTTCCGCACTGACGGGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTAt < 2:136856/143‑1 (MQ=255) gttcttcACCCGTATCGATCAGACGTTTGTATAAATCTTCCGCACTGTCGTGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCa < 2:141539/142‑1 (MQ=255) aCCCATATCGATCAGACGTTTGTATAAATCTTCCGCACTGACGTGATGGTTGTCCGGCTCCTGAAGAACTTCCCGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGc > 1:921629/1‑143 (MQ=255) ccATATCGATCAGACGTTTGTATAAATCTTCCGCACTGACGTGATGGTTGTCCGGCTCCTGAAGAACATCCAGGCTTTTTAAACGAGTAAGCGTTACTTTCAGGCCAACTTTCTTTAGGGCGGTATTGTTATCAGTCATGCgg > 2:418041/1‑143 (MQ=255) gACGTTTGTATAAATCTTCCGCACTGACGTGATGGTTGTCCGGCTCCTGAAGACCTCCCAGGCTTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGCGCGGTACTGTTATGCGTCATGCGGAATCGGTCCTgc > 2:591421/1‑142 (MQ=255) gACGTTTGTATAAATCTTCCGCACTGACGAGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCGGTCATGCGGAATCTGTCCTgc > 2:591431/1‑142 (MQ=255) tttGTATAAATCTTCCGCACTGACGTGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTACGGGGAACGGTCAGGCGGGGTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGTCCTGtgatg > 2:451049/1‑139 (MQ=255) tGTATAAATCTTCCGCACTGACGTGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGTCCTGTTACTaa < 2:237959/143‑1 (MQ=255) tGTATAAATCTTCCCCACTGACGGGAGGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGTCCTGTTACTaa < 2:487045/143‑1 (MQ=255) ttCCGCACTGACGTGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGTCCTGTTACTAGGCGGTTCACt > 1:208368/1‑143 (MQ=255) ttCCGCACTGACGTGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGTCCTGTTACTACGCGGTTCACt > 1:301752/1‑143 (MQ=255) cACTGACGTGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCATCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGTCCTGTTACTAAGCGGTTCACTTCAtt > 1:845288/1‑143 (MQ=255) aCTGACGTGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGATTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGTCCTGTTACTAAGCGGTTCACTTCATTa < 1:563570/143‑1 (MQ=255) gTGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGCATCTGTCCTGCTACTAAACGGTCAACTTCATTaaaagca > 2:433775/1‑141 (MQ=255) gTGATGGTTGTCCGGCTCCTGAAGAACTACCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGACATCAGGTTTTAATAGTGTTACTAAGCGGTTCACTTCATTAgaagaa > 2:913738/1‑143 (MQ=255) gATGGTTGTCCCGCTCCTGAATGACTTCCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGTGCGGTATCGTTATCAGTCATGCGGAATCTGTCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGt < 2:299855/143‑1 (MQ=255) ggTTGTCCGGCTCCTGAAGAAATTACAGGAATATTAAACGAGTAAGCGTTACTTTCAGGCCAGCATTGTTTAGGGCGGTATTGTTATCAATCATGCGGAATCTGTCCTGATACTAAGCGGTTCACTTGATTAGAAGAAGAGAc > 2:115214/1‑143 (MQ=255) tCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGTCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAAt > 1:619361/1‑143 (MQ=255) ccGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGTCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAAtt < 2:869371/143‑1 (MQ=255) ttCCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGTCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGCGATAATg > 1:269802/1‑143 (MQ=255) ttCCAGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGTCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATg > 1:745339/1‑143 (MQ=255) aGGATTTTTAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGTCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTa > 2:284164/1‑143 (MQ=255) tttttAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGTCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCAt > 1:418936/1‑143 (MQ=255) ttttAAACGAGTATGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGGCCTGGTACTATGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCAtt < 2:618119/143‑1 (MQ=255) tAAACGAGTAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGTCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATtata < 1:651818/143‑1 (MQ=255) | GTCGTCAAACTGGTTCAGTACGCGATATACCGTAGCCAGACCAATTTCTTCACCCATATCGATCAGACGTTTGTATAAATCTTCCGCACTGACGTGATGGTTGTCCGGCTCCTGAAGAACTTCCAGGATTTTTAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGTCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATTATA > NC_000913/710455‑710729 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |