Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,018,983 A→T 9.5% intergenic (+46/+30) matP → / ← ompA macrodomain Ter protein/outer membrane porin A

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,018,9830AT 9.5% 149.0 / 6.2 61intergenic (+46/+30)matP/ompAmacrodomain Ter protein/outer membrane porin A
Reads supporting (aligned to +/- strand):  ref base A (25/29);  new base T (4/2);  total (29/32)
Fisher's exact test for biased strand distribution p-value = 4.17e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.35e-01

CTGATTGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGTTTCACGTTGTCACAG  >  NC_000913/1018848‑1019124
                                                                                                                                       |                                                                                                                                             
cTGATTGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCCAACAAAACCCCGCAGCAGCgg                                                                                                                                        >  2:141032/1‑143 (MQ=255)
    ttGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATACCTGACGAAAGTCAGTTCAATTTACTAAAGGCAAACAAAACCCCGCAGCAGCGGGGtg                                                                                                                                    >  2:506203/1‑142 (MQ=255)
    ttGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCTGCTGCGGGGtt                                                                                                                                    <  1:176884/143‑1 (MQ=255)
    atGAAGGTGCGGAAAACAAAAAGAAATACGCGAATAAAATGTCTTCACTGAAGCAGGATCTGCAGGCATTGATGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGtt                                                                                                                                    <  2:851910/142‑1 (MQ=255)
        aGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTc                                                                                                                                >  1:454008/1‑143 (MQ=255)
          aTGCGGAGAGCAAAGGGAGATTCGCGAGTGACATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGCTCCGGAATAACTGACGAAAGTCAGTTCAATTTACTACAGGCAAAAAAAACCCCGCCGCAGCGGGGTTTTTCTa                                                                                                                              <  2:21599/143‑1 (MQ=255)
           tGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGATGGGCAACCAATAACTGACGCAAGTGAGATCAAGTTACTAAAGGCAAAAAAAACCCAGCAGCAGCCGCGTTTTGCTAc                                                                                                                             >  2:509929/1‑143 (MQ=255)
              ggAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATGGATGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTGTTCTACCAg                                                                                                                          >  2:343566/1‑143 (MQ=255)
               gAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGa                                                                                                                         <  2:165293/143‑1 (MQ=255)
                aaaaCAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGACTGTCTACCAGAc                                                                                                                        >  2:190489/1‑143 (MQ=255)
                      aaGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTCCCAGACGCGAAc                                                                                                                  <  1:943619/143‑1 (MQ=255)
                      aaGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAAc                                                                                                                  <  1:22142/143‑1 (MQ=255)
                           aaaTACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTacg                                                                                                             >  1:403811/1‑141 (MQ=255)
                                  cgcagtaaaTGTCTTCGCGGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCGGTGCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCgg                                                                                                      <  2:170064/137‑1 (MQ=255)
                                      tgatgcgtcgtcTTTGAAGCAGGTCCTGTGTGCATTGCTGGGTAATGAATAACTGTCGCAAGTCAGTGCAAGTTAGTAAAGGCAAAAAAAGCCCCGCAGCAGCGGGGTTTTTCTACCGGACGAGAACTTAAGCCTGCGGCTGa                                                                                                  <  2:778303/137‑1 (MQ=255)
                                      tagagtGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGa                                                                                                  <  2:772069/138‑1 (MQ=255)
                                      cacaaTGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGCTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGa                                                                                                  <  1:533618/140‑1 (MQ=255)
                                          aTGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGATCTGGCATCCCCACAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTa                                                                                              >  1:938074/1‑143 (MQ=255)
                                             tcttctCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGCGTGACaa                                                                                           >  1:701468/1‑143 (MQ=255)
                                               ttctCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGAGGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCGGAGTTACAACg                                                                                         >  2:66098/1‑143 (MQ=255)
                                                  tctGAAGCAGGATCTGCAGGCATTGCTGGGTAAGTAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAACCCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCt                                                                                      <  1:407566/143‑1 (MQ=255)
                                                    tGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCttt                                                                                    >  1:870669/1‑143 (MQ=255)
                                                         cAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATAc                                                                               >  1:422417/1‑143 (MQ=255)
                                                          aGGAGCGGCCGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAACCCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATAcc                                                                              <  1:124691/143‑1 (MQ=255)
                                                               cTGCAGGCATTGCTGGGTAAGGAAGAACTGACGAAAGTCAGTTCAAGTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTaa                                                                         <  1:850646/143‑1 (MQ=255)
                                                                 gCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAACCACCAAGACCAGCGGGGTTTTTCGACCAGACTATAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACt                                                                       <  1:217754/143‑1 (MQ=255)
                                                                  cAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGGTCAAGTTACTAAAGGCGAAAGAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTCATACCTTTAACtt                                                                      <  2:290519/143‑1 (MQ=255)
                                                                   aGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTc                                                                     <  2:830939/143‑1 (MQ=255)
                                                                      cATTGGTGGGGACGCAAGAACTGACGACAGTCAGTTCAATTTACTAAAGGCAAAAAAACCCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGAt                                                                  <  1:358514/143‑1 (MQ=255)
                                                                      cATGGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAACACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGAt                                                                  <  2:255996/143‑1 (MQ=255)
                                                                            aaggaaaGGAATAACAGACGAAAGTCAGTACAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTAc                                                            <  1:196663/138‑1 (MQ=255)
                                                                              ggTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTAcgc                                                          <  1:864667/143‑1 (MQ=255)
                                                                                tAAGGACTATCTGACGAAATTCAGTTCAATTTACTAAGGGCAAAAAAAACCCCGCAGCCGCGGTGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGcga                                                        <  2:77590/143‑1 (MQ=255)
                                                                                   ggAATAACTGACGAAAGTCGGGTCAATTTACTCCCGGCAGCAAATACCTCGCTGCAGCGGCGTTGTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGcgacga                                                     <  2:915220/143‑1 (MQ=255)
                                                                                         aCTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGa                                               >  2:93376/1‑143 (MQ=255)
                                                                                             aCGACAGTTAGTTCAGTTTCCTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTGTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCa                                           <  2:358217/143‑1 (MQ=255)
                                                                                                      aGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGa                                  <  1:42974/143‑1 (MQ=255)
                                                                                                        ttCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATCCCTTTATCTCCGAACACTACGACACCATCCGGAGCCAGGCACTCGATc                                >  2:914945/1‑143 (MQ=255)
                                                                                                         tCAATTTACTAAAGGCAAAAAAAGCCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCa                               <  2:181119/143‑1 (MQ=255)
                                                                                                         tCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGGCGATCCGGAGCCAGGCAGTCGCTCa                               >  1:246472/1‑143 (MQ=255)
                                                                                                         tCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTCTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCa                               <  1:66098/143‑1 (MQ=255)
                                                                                                          gaggttACTGAAGGCAAAAAGAGCCGCGCAGCAGCGGGGTTTTGCTACCAGACGAGGGCTGAAGCCTGCGGCGGGGGTACAACGGCTTTGATACCGGTAACTTCGGTCGCTACGCGACGATCCGGAGCCAGGCAGTCGATCAg                              <  2:216833/139‑1 (MQ=255)
                                                                                                          cAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGGTCCGGCGCCAGGCAGTCGATCAg                              >  1:877425/1‑143 (MQ=255)
                                                                                                          cAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAg                              >  1:399744/1‑143 (MQ=255)
                                                                                                           aaTTTACAAAAGGTAAAAAAAACCCCGCAGCAGCGGTGTTTTTCTACCAGACGAGAATTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGt                             <  1:551795/143‑1 (MQ=255)
                                                                                                            aTTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTg                            <  1:720098/143‑1 (MQ=255)
                                                                                                                       gCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGt                 >  1:518503/1‑143 (MQ=255)
                                                                                                                         aaaaaaagCCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGttt               <  1:883232/143‑1 (MQ=255)
                                                                                                                         aaaaaaaaCCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGTGTTTAAGCCTGAGGGTGTGTTACAACGTCTTTGATACCTTTCACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGttt               >  1:17866/1‑143 (MQ=255)
                                                                                                                         aaaaaaaaCCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGttt               <  2:302076/143‑1 (MQ=255)
                                                                                                                         aaaaaaaaCCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTATACGCGACGATCCGGAGCCAGGCAGTCGATCAGAGCAGCACGcaggtt               >  2:728669/1‑138 (MQ=255)
                                                                                                                          aaaaaaaCCCCGCAGCAGCGGGGATTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGTTTc              >  1:262482/1‑143 (MQ=255)
                                                                                                                           gaaaaaCCCCGCTGCTGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGGCTTTGATACCTTTAACTTCGATCTCTACGCGCCGATCCGGCTCCCGGCCGTCAATCAGTGCAGCGCGCAGTTTCa             >  2:31832/2‑143 (MQ=255)
                                                                                                                             aaaaCCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGTCTCACg           >  2:877825/1‑143 (MQ=255)
                                                                                                                              aaaCCCCGCTGCTGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTGTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCCGCCCGCTGTTTCCCGt          >  2:833988/1‑143 (MQ=255)
                                                                                                                                 ccccGCTGCTGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGGCGATCCGGAGCCAGGCAGTCGATCAGTCCAGCACGCTGTTTCACGTTGt       >  2:512642/1‑143 (MQ=255)
                                                                                                                                 ccccGCTGCTGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCCGTTTCACGTTGt       >  2:829991/1‑143 (MQ=255)
                                                                                                                                  cccGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGCTCCGGAGCCAGGCAGTCGATCAGTGCAGCGCGCTGTTTCACGTTGTc      >  1:531390/1‑143 (MQ=255)
                                                                                                                                   ccGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGGGTTACAACGTCTTTGATACCTTTAACTTCGCTCTCTACGCGCCGATCCGGAGCCAGGCAGTCGCTCAGTGCCGCACGCTGTTTCACGTTGTcc     >  1:408075/1‑142 (MQ=255)
                                                                                                                                   ccGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATAGATTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCAGTTTCACGTTGTca     >  2:331287/1‑143 (MQ=255)
                                                                                                                                    cGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGTTTCACGTTGTcac    <  1:758314/143‑1 (MQ=255)
                                                                                                                                      cagcagCGGGGTCTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGTTTCACGTTGTCACAg  <  2:142357/143‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                             
CTGATTGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGGCTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGTTTCACGTTGTCACAG  >  NC_000913/1018848‑1019124

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: