| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,056,548 | C→T | 5.8% | intergenic (‑209/+77) | glnL ← / ← glnA | sensory histidine kinase NtrB/glutamine synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,056,548 | 0 | C | T | 5.8% | 188.6 / 2.4 | 69 | intergenic (‑209/+77) | glnL/glnA | sensory histidine kinase NtrB/glutamine synthetase |
| Reads supporting (aligned to +/- strand): ref base C (31/34); new base T (2/2); total (33/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.40e-01 | |||||||||||
AGCATCAGAGAATTGACGGAGAAAAAAGCCCATGCAGAGATGGGCTACAGATAGCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGCAACTAAAACACTTAGACGCTGTAGTACAGCTCAAACTCTACCGGATGCGGAGTCATACGCACGCGGTCATCTTCTTC > NC_000913/4056407‑4056690 | aGCATCAGAGAATTGACGGAGAAAAAAGCCCATGCAGAGATGGGCTACAGATAGCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCa > 1:503581/1‑143 (MQ=255)aGCATCAGAGAATTGACGGAGAAAAAAGCCCATGCAGAGATGGGCTACAGATAGCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCa > 1:914481/1‑143 (MQ=255) aTCAGAGAATTGACGGAGAAAAAAGCCCATGCAGAGATGGGCTACATTGAGCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATcc > 1:397954/1‑143 (MQ=255) agagAATTGACGGAGAAAAAAGCCCATGCAGAGATGGGCTACAGAAAAAAAAATTTAATTGCTTTTGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGc < 1:686065/143‑1 (MQ=255) aaTTGCCGGAGAAAAAAGCCCACGCAGAGATGGGCTACAGATGGCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGa < 1:79268/143‑1 (MQ=255) aaTTGACGGCGAAAAAATCCGATGCAGAGATGGGCTACAGATAGCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGa < 2:532131/143‑1 (MQ=255) aaTTGACGGAGAAAAAAGCCCATGCAGAGATGGGCTACAGATAGCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATCAGACGCATTTGCGTCGCATCCGGCGTGa > 2:422705/1‑143 (MQ=255) cgttcctgagaAAAAAGCCCATGAAAAGATGGGCTACAGCTAGCTGACCCCGCTTGCGTTGGAGAACGACTGACCTGCTCCGGCCGACCGCATCCTCCGCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGAt < 2:152454/136‑1 (MQ=255) tGACGGAGAAAAAAGCCCATGCAGAGATGGGCTACAGATAGCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATGCGACGCAAATGCGTCTTATCCGGcctacacg < 1:42411/143‑8 (MQ=37) tGACGGAGAAAAAAGCCCATGCAGAGATGGGCTACAGATAGCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATGCGACGCAAATGCGTCTTATCCGGcctacacg < 2:848941/143‑8 (MQ=37) acgcggaACAAAGCCCATGGATGGACGGGCTACAGATAGCTGACAAACTTCACGTTGGAGAGCGACTCGCCTGCTCCGGCCTACCACAGCGTCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGc < 2:352216/138‑1 (MQ=255) ggAGAAAAAAGCCCATGCAGAGATGGGCTACAGATAGCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCtt < 1:498703/143‑1 (MQ=255) gatgagaaaGCCGATGGAGAGATGGGCTACAGATAGCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACAGCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTg < 2:297797/137‑1 (MQ=255) agaAAAAAGCCCATGCAGAGATGGGCTACAGATAGCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGc > 1:412560/1‑143 (MQ=255) aaaaaaGCCCATGCAGAGATGGGCTACAGATAGCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCa > 1:236621/1‑143 (MQ=255) aaaaaaGCCCATGCAGAGATGGGCTACAGATAGCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCa < 1:656122/143‑1 (MQ=255) aaaaaaGCCCATGCAGAGAGGGCCTACAGATAGCTGCCAAACTTCACGTTGGAGAGCGCCTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCa < 2:300902/143‑1 (MQ=255) ccATGCAGAGATGGGCTACAGATAGCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTCGCCCGGATAAGACGCATCTGCGCCGCATCCCCCGAGATGTACCTGCCACCGAcccc > 2:611398/1‑143 (MQ=255) cATGCAGAGATGGGCGACAGATAGCTGACAAACTTCACGTTGGAGAGCGACTCACCCGCTCCGGCCTACCACATCATAACCGCGTAGGCCGGATAAGACGCCCTTGCGGCGCATCCGGCGTGATGCGCCGGCCACCGAccccc > 2:794796/1‑142 (MQ=255) agtgaTGCGCTACATCTCGCTGCCAACCTTCACGGTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGGATGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCt < 2:756220/140‑1 (MQ=255) gggCTACGGATAGCGGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCATgagaga < 2:382240/143‑6 (MQ=255) gggCTACAGATAGCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCaga < 1:382099/143‑1 (MQ=255) gggCTACAGATAGCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCaga < 2:270645/143‑1 (MQ=255) tAGCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGCTCCCAGGCGTGCCAGATACAGGCGaa > 1:842462/1‑143 (MQ=255) gCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCGCATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGaaaa < 2:832110/143‑1 (MQ=255) gCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGaaaa < 1:278382/143‑1 (MQ=255) tGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGGGACAGGCGAagagc > 1:105134/1‑142 (MQ=255) tGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGAGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGt > 2:90613/1‑143 (MQ=255) acagagctCACGGTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGttt < 1:835302/136‑1 (MQ=255) aaaCTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATGTGCGTCCCATCCGGCGTGACGTGCTTGCCCCCGGTCCCAGGCCTGGCACAGACAGGCGAAAAGCTTcg > 2:51352/1‑142 (MQ=255) agccgcACGTCGGCGAGCGGCGCACCTGCTCCGGCCTACCAAATCATCACCGTGTAGGCCGGATAAGACGCATTCCCGGCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCa < 1:901632/138‑1 (MQ=255) aaCTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCa > 1:296721/1‑143 (MQ=255) aCTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCAGCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCAc < 1:11256/143‑1 (MQ=255) cTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAACAGTCCCCACg > 2:405742/1‑143 (MQ=255) tCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGc < 1:163600/143‑1 (MQ=255) ccGTTGGAGAGCGACGCACCTGCGCCGGCCTACCACATCAGCACCGTGTAGGCTCGTTATTACACATTTGCGTCTCATCCGGCGTGATGTGCTTGCCACCGATCCCCTGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGCaa < 2:108394/142‑1 (MQ=255) cGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCCGCGAGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAACAGTTTCCACGGCAAc > 2:765636/1‑143 (MQ=255) ttGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTCTCCACGGCaaatg > 1:745307/1‑140 (MQ=255) ggAGAGCGACGCACCTGCTCCGGCCTACCACACCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGCAACTaaa < 2:437860/143‑1 (MQ=255) agagCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAGAAGGTTCCACGGCAACTaaacc > 2:722066/1‑141 (MQ=255) cgccTCGCCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGCAACTAAAACACtt < 1:241862/140‑1 (MQ=255) gACTCACCTGCTCCGGCCTACCACGTCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATGCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCTGTGTCAAACCAAAACTTTCCACGGCAACTAAAACACTTa < 2:924857/143‑1 (MQ=255) gACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGCTCCCAGGCCTGCCAGAGACAGGCGCCACGTTTCCACGGCCACTAAAACACtaa > 1:451731/1‑141 (MQ=255) tCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGCAACTAAAACACTTAGAc > 1:531607/1‑143 (MQ=255) tCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGAGAAAACTTTCCACGGCAACTAAAACACTAAGAc > 2:580988/1‑143 (MQ=255) cACCTGCTCCAGCCAATCACGTCTGCGCCGTGTAGGCCGGAGAAGACGCAGTTGCGTCGCTTCCGGCGTGATGCGCTTGCCACCGCGCCCAGGCCTGCCAGAGACAGGCGAAGAGTTTCCACGGCAACTAAAACACTTAGACg < 2:861913/143‑1 (MQ=255) aCCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCCTCAGGCGTGATGTGCTTGCCACCGATCGCAGGCCTGCCCGACACAGGGGGAACGATGCCACGGCACCTGACACACTTAAACGc > 2:504330/1‑143 (MQ=255) cGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACCGGCGACAAGTTTCCCCGGCAACTACAACACTTAGACGCCGTAGTAc > 2:924006/1‑143 (MQ=255) cGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGCAACTAAAACACTTAGACGCTGTAGTAc > 1:906249/1‑143 (MQ=255) gCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGCAACCAAAACACTTAGACGCCGTAGTACAg > 2:49046/1‑143 (MQ=255) tcatcaCCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGGGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGGTTCCACGGCAACTAAAACACTTAGACGCTGTAGTACAGCTCAAActct > 1:829680/1‑143 (MQ=255) tcaCCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGCAACTCAACCACTTCGCCGCCGTCGTCCAGCTCAACCTCTAcc > 1:64163/1‑143 (MQ=255) gtgtAGGCCGGATCAGACGCATTTGCGCCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGCAACTAAAACACTTAGACGCTGTAGTACAGCTCAAACTCTACCGGATg < 2:84053/143‑1 (MQ=255) aGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGCAACTAAAACACTTAGACGCTGTAGTACAGCTCAAACTCTACCGGATGCGGa < 1:316858/143‑1 (MQ=255) ggCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAACGTTTCCACGGCAACTAAAACACTTAGACGCTGTCGTACAGCTCAAAGTCTACCGGATGCGGac > 2:713853/1‑142 (MQ=255) ggCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGCAACTAAAACACTTAGACGCTGTAGTACAGCTCAAACTCTACCGGATGCGGAg < 1:191197/143‑1 (MQ=255) cgCCGGATGCGACGCAAAGGCGTCTTATCCGGCGTGATGTGATTGCCAACGATCCCAGGCCTGAGAGAGGGGGGCGAAAGGTGTCCACGGCAACTAAAACACTTAGACGCTGTAGTAGAGCTGAAACTCTACCGGACGCGGAg > 1:132266/2‑143 (MQ=255) gCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGCAACTAAAACACTTAGACGCTGTAGTACAGCTCAAACTCTACCGGATGCGGAGt > 1:277198/1‑143 (MQ=255) gCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGCAACTAAAACACTTAGACGCTGTAGTACAGCTCAAACTCTACCGGATGCGGAGt < 2:800049/143‑1 (MQ=255) ccGGATGCGACGCAAATGCGTCTTATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGCAACTAAAACACTTAGACGCTGTAGTACAGCTCAAACTCAACCGGATGCGGAGTc > 2:224905/1‑143 (MQ=255) ccGGATAAGTCGCAGTTGCGTCGCATACGGCGTGATGTTCTTGCCATTGATCTCAGGCCTGTCAGAGACAGGCGAAAAGTTTCCACGGCAACTAAAACACTTAGACGCTGTAGTACAGCTCAAACTCTACCGGATGCGGAGTc < 1:719765/143‑1 (MQ=255) ccGGATAAGACGCGTTTGCGTCGCATCCGGCGTGAGGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGCAACTAAAACACTTAGACGCTGTAGTACAGCTCAAACTCTACCGGATGCGGAGTc < 2:741028/143‑1 (MQ=255) gACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGCAACTAAAACACTTAGACGCTGTAGTACAGCTCAAACTCTACCGGATGCGGAGTCATacgcac > 1:230409/1‑143 (MQ=255) aCGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGCAACTAAACCACCTAGACGCTGTAGCACAGCTCAAACCCTAACGGATCCGGAGACATacgcacg > 2:384261/1‑143 (MQ=255) gCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCAGCAGACCCAGTCCGGCCAGAGACAGGCGAAAAGTTTCCACGGCAACTAAAACACTTAGACGCTGTAGTACAGCTCAAACTCTACCGGATGCGGAGTCATACGCAcgcg < 2:914481/143‑1 (MQ=255) gCATTTGCGTCGCATCCGGCGTGATGTGCTCGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGTCAACTAAAACACTTAGACGCTGTAGTACAGCTCAAACTCTACCGGATGCGGAGTCATACGCAcgcg < 2:503581/143‑1 (MQ=255) gCATTTGCGTCGCATCCGGCGTGAAGTGCTTGCCACCGATCCCAGGCCTGCCACAGACAGGCGAACAGTTTCCACGGCAACTAAAACACTCAGACGCTGAAGCACAGCCCAAACTCTACCGGATGCGGAGTCAAACGCCcgcg > 2:443015/1‑143 (MQ=255) gCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGCAACTAAAACACTTAGACGCTGTAGTACAGCTCAAACTCTACCGGATGCGGAGTCATACGCACGCGGTCAtc < 1:230847/143‑1 (MQ=255) gCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGCAACTAAAACACTTAGACGCTGTAGTACAGCTCAAACTCTACCGGATGCGGAGTCATACGCACGCGGTCATcttctt < 2:236621/143‑1 (MQ=255) cATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTCTCCACGGCAACTAAAACACTTAGACGCTGTAGTACAGCTCCAACTCTCCCGCGTGCGGAGTCATACGCCCGCGGCCATCttcgtc > 2:503390/1‑143 (MQ=255) | AGCATCAGAGAATTGACGGAGAAAAAAGCCCATGCAGAGATGGGCTACAGATAGCTGACAAACTTCACGTTGGAGAGCGACTCACCTGCTCCGGCCTACCACATCATCACCGTGTAGGCCGGATAAGACGCATTTGCGTCGCATCCGGCGTGATGTGCTTGCCACCGATCCCAGGCCTGCCAGAGACAGGCGAAAAGTTTCCACGGCAACTAAAACACTTAGACGCTGTAGTACAGCTCAAACTCTACCGGATGCGGAGTCATACGCACGCGGTCATCTTCTTC > NC_000913/4056407‑4056690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |