| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,648,353:1 | +T | 5.7% | intergenic (+12/‑155) | dicA → / → ydfA | DNA‑binding transcriptional dual regulator DicA/Qin prophage; DUF1391 domain‑containing protein YdfA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,648,353 | 1 | . | T | 5.7% | 635.5 / 31.2 | 157 | intergenic (+12/‑155) | dicA/ydfA | DNA‑binding transcriptional dual regulator DicA/Qin prophage; DUF1391 domain‑containing protein YdfA |
| Reads supporting (aligned to +/- strand): ref base . (72/76); new base T (5/4); total (77/80) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
Only 100 of 157 total aligned reads displayed.
GCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATG > NC_000913/1648206‑1648499 | gCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCACCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑Gt > 1:1265704/1‑150 (MQ=255) tCCTTTAGCTGTTTAATGCACTGCCATAATCAGAACAGTATACCCAGCTCGCAGAAATTCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTa < 2:620506/150‑1 (MQ=255) ccTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTAt > 1:322621/1‑150 (MQ=255) ccTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTAt > 1:316618/1‑150 (MQ=255) ccTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTAt > 1:484174/1‑150 (MQ=255) cTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTTAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTagg > 2:794989/1‑148 (MQ=255) tGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCtt > 1:1196181/1‑150 (MQ=255) tGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCtt < 1:1418544/150‑1 (MQ=255) gCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTa < 2:484174/150‑1 (MQ=255) gCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTa > 2:1602436/1‑150 (MQ=255) tGTTTAATGCACTGCCAGAATCCGAACAGGATACCCAGCTCGCCGATATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAAC‑TCATTGATGATGTTATCTTTTatt < 2:825504/150‑3 (MQ=255) tGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTAcc < 2:33032/150‑1 (MQ=255) gTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACca > 1:1527080/1‑150 (MQ=255) tttAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGATCTCTACTAAAAAACTTCAAAAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAAC‑TCATTGATGATGTTATCTTTTatttg < 1:1167506/150‑5 (MQ=38) tttAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACcac < 1:66450/150‑1 (MQ=255) tttAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAAC‑TCATTGATGATGTTATCTTTTatttg < 1:1475014/150‑5 (MQ=39) ttAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACcaca < 2:1320004/150‑1 (MQ=255) aTGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCa > 2:1619392/1‑150 (MQ=255) gCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAAt > 1:427640/1‑150 (MQ=255) gCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAAt < 2:351748/150‑1 (MQ=255) gCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAAt < 2:357735/150‑1 (MQ=255) cACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGTGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAAtt > 2:868871/1‑150 (MQ=255) aCTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTa < 1:1154418/150‑1 (MQ=255) gCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGt > 2:994146/1‑150 (MQ=255) aGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAg < 2:1196181/150‑1 (MQ=255) gAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGc > 2:588773/1‑150 (MQ=255) aaTCAGAACACTATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAAATACTAAAAGCCCGTCAGCGGACAAATAAAATATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCt < 1:1427588/150‑1 (MQ=255) cAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTTCTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCtata > 1:1609774/1‑150 (MQ=255) cAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCtata > 2:1028192/1‑150 (MQ=255) aaCAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGTATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCa < 2:1642175/150‑1 (MQ=255) ggATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACcac < 2:1022600/124‑1 (MQ=255) ggATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACcac > 1:1022600/1‑124 (MQ=255) cccAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATc < 1:313011/150‑1 (MQ=255) cccAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATc > 1:1124948/1‑150 (MQ=255) ccAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCa > 1:391142/1‑150 (MQ=255) ccAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCa > 2:1506850/1‑150 (MQ=255) ccAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCa < 2:628326/150‑1 (MQ=255) aGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACt > 1:1214107/1‑150 (MQ=255) gCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACtt < 2:1424533/150‑1 (MQ=255) ccGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCg > 2:531224/1‑150 (MQ=255) cGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGa > 2:1483759/1‑150 (MQ=255) gAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGat > 2:1424910/1‑150 (MQ=255) tGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGt < 2:1269055/150‑1 (MQ=255) gCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGtt < 2:193400/150‑1 (MQ=255) cGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATg < 1:588773/150‑1 (MQ=255) cGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATg < 1:1483759/150‑1 (MQ=255) cGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATg < 2:1584349/150‑1 (MQ=255) aaaaCTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATc < 1:1436699/150‑1 (MQ=255) cTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGc < 1:567841/141‑1 (MQ=255) cTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGc > 2:567841/1‑141 (MQ=255) cTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGt > 2:387309/1‑150 (MQ=255) ttCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGtt > 2:769382/1‑150 (MQ=255) tCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGttt > 2:73767/1‑150 (MQ=255) aaTAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGc > 1:38743/1‑150 (MQ=255) aTAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCa < 2:427640/150‑1 (MQ=255) aTAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCa < 1:1281487/150‑1 (MQ=255) tAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGGATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCAt > 1:1047055/1‑150 (MQ=255) tAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCAt < 2:316618/150‑1 (MQ=255) tAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCAt < 2:322621/150‑1 (MQ=255) tAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCAt < 1:116599/150‑1 (MQ=255) ctctTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCT‑ATCTTGTTTg < 2:574048/142‑1 (MQ=255) ctTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAacac > 1:181616/1‑150 (MQ=255) ttGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAacacac > 1:32790/1‑150 (MQ=255) aaTTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACg > 2:421355/1‑150 (MQ=255) aTTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATg < 2:848738/118‑1 (MQ=255) aTTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAAt < 1:375006/124‑1 (MQ=255) aTTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAAt > 2:375006/1‑124 (MQ=255) tACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTTGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGgtg > 2:1282432/1‑150 (MQ=255) tACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGgtg < 1:421355/150‑1 (MQ=255) aCTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGgtgt < 1:1571094/150‑1 (MQ=255) cTAAAAGACCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTAAGATACCTATAGCATACAAAATCACTTGACCGATATCTAAGACATGGCTAATCTTGCTTACATCAACAAACCCCACGGAGtt > 1:1584664/1‑150 (MQ=255) tAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTtc < 2:1124948/150‑1 (MQ=255) tAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTtc > 2:320814/1‑150 (MQ=255) tAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTtc < 1:531224/150‑1 (MQ=255) aaaaGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTtct > 2:930832/1‑150 (MQ=255) aaaaGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTtct > 1:662894/1‑150 (MQ=255) aaaGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTtctc < 1:169671/150‑1 (MQ=255) aaGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGTGCGgtgtgttga < 1:621019/150‑6 (MQ=255) aaGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGTGCGgtgtgttga < 2:391142/150‑6 (MQ=255) aGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAg < 1:1028192/150‑1 (MQ=255) aGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAg < 2:1356727/150‑1 (MQ=255) gCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGTGCGgtgtgttgatg < 1:907824/150‑8 (MQ=255) gCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGc > 1:757957/1‑150 (MQ=255) cccGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCa < 2:1185225/150‑1 (MQ=255) gTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAAc < 1:73767/150‑1 (MQ=255) ggtAAAAGATAAC‑TCATTGATGATGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAc > 2:496109/3‑150 (MQ=255) aaTAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAc > 2:1275623/1‑150 (MQ=255) aaTAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAc > 1:1635152/1‑150 (MQ=255) aaTAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAc > 2:1281596/1‑150 (MQ=255) gtAAAAGATAAC‑TCATTGATGATGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAcc > 2:105267/2‑150 (MQ=255) aTAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTTGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAcc < 1:1611542/150‑1 (MQ=255) aTAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAcc < 1:997925/150‑1 (MQ=255) aTAAAAGATAACATAATCAATGA‑GTTATCTTTTAACACATCAATTATGTTAGCTATAGCATACAAAATAAATTGACCGATATGTTAGTCATGGCTTATATTGTTTGCATCAACAAACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAcc > 2:1563426/1‑150 (MQ=255) aaaaGATAAC‑TCATTGATGATGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAcccc > 1:889349/1‑150 (MQ=255) aGATAACATCATCAATGA‑GTTATCTTTTACCCCATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTAATGGCTAATCTTGTTTGAATAAACACACCGCACGGTGTTCTAAGCAAACAGTTCCGCTACCCCAGc > 2:253336/1‑150 (MQ=255) aGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGc > 1:839294/1‑150 (MQ=255) aaCATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTcc > 2:1662996/1‑135 (MQ=255) tcatcaATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAggg < 2:893761/150‑1 (MQ=255) caATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGaaa > 2:1357489/1‑150 (MQ=255) aaTGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAAt > 1:1556193/1‑150 (MQ=255) | GCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATG > NC_000913/1648206‑1648499 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |