New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1009602	89 (0.940)	5 (0.060)	5/260	NT	5.8%	coding (1759/2109 nt)	rlmL	fused 23S rRNA m(2)G2445 methyltransferase and 23S rRNA m(7)G2069 methyltransferase
	?	NC_000913	= 1009624	79 (0.880)					coding (1781/2109 nt)	rlmL	fused 23S rRNA m(2)G2445 methyltransferase and 23S rRNA m(7)G2069 methyltransferase

GATGAGCAAAGGCAAAGATTTCCTCAACCTGTTCTCTTATACCGGCAGCGCCACCGTGCATGCGGGATTAGGCGGTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1009448‑1009602 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgaATCAGGCGATGCGCACGCCCGGTCAGGCCATTCAGACGCAGGTTGCGTTCTGCCCATTCCAGATAAGTACGCGACATATCCACGGTGGTGGTGCTGCGTGCACCGCCTAATCCCGCATGCACGGTGGCGCTGCCGGTATAAGAGAACA  <  NC_000913/1009624‑1009477                                                                                                                                                                                                                                                                                                                 GATGAGCAAAGGCAAAGATTTCCTCAACCTGTTCTCTTATACCGGCAGCGCCACCGTGCATGCGGGATTAGGCGGTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGG                                                                                                                                                           >  1:1028439/1‑150   TGAGCAAAGGCAAAGATTTCCTCAACCTGTTCTCTTATACCGGCAGCGCCACCGTGCATGCGGGATTAGGCGGTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCC                                                                                                                                                         <  1:1254113/150‑1   TGAGCAAAGGCAAAGATTTCCTCAACCTGTTCTCTTATACCGGCAGCGCCACCGTGCATGCGGGATTAGGCGGTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCC                                                                                                                                                         >  1:299616/1‑150                                 TCTCTTATACCGGCAGCGCCACCGTGCATGCGGGATTAGGCGGTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTG‑ACCGGGCGATGCGCACGCCCGGTCAGGC                                                                                                                          <  1:1436408/150‑1                                        TACCGGCAGCGCCACCGTGCATGCGGGATTAGGCGGTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGAATCAGGCGATGCGCACGCCCGGTCAGGCCATTCA                                                                                                                    <  1:1455825/150‑1                                          CCGGCAGCGCCACCGTGCATGCGGGATTAGGCGGTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGAATCAGGCGATGCGCACGCCCGGTCAGGCCATTCAGA                                                                                                                  <  1:1378014/150‑1                                           CGGCAGCGCCACCGTGCATGCGGGATTAGGCGGTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGAATCAGGCGATGCGCACGCCCGGTCAGGCCATTCAGAC                                                                                                                 <  1:60913/150‑1                                                                             GCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGAATCAGGCGATGCGCACGCCCGGTCAGGCCATTCAGACGCAGGTTGCGTTCTGCCCATTCCAGATAAGTACG                                                                               <  2:624543/150‑1                                                                                                                                                     GGCCTGAATCAGGCGATGCGCACGCCCGGGCAGGCCATTCAGACGCAGGTTGCGTTCTGCCCATTCCAGATAAGTACGCGACATATCCACGGTGGTGGTGCTGCGTGCACCGCCTAATCCCGCATGCACGGTGGCGCTGCCGGTATAAGA       >  1:144891/1‑150                                                                                                                                                      GCCTGAATCAGGCGATGCGCACGCCCGGTCAGGCCATTCAGACGCAGGTTGCGTTCTGCCCATTCCAGATAAGTACGCGACATATCCACGGTGGTGGTGCTGCGTGCACCGCCTAATCCCGCATGCACGGTGGCGCTGCCGGTATAAGAG      <  1:1130263/150‑1                                                                                                                                                      GCCTGAATCAGGCGATGCGCACGCCCGGTCAGGCCATTCAGACGCAGGTTGCGTTCTGCCCATTCCAGATAAGTACGCGACATATCCACGGTGGTGGTGCTGCGTGCACCGCCTAATCCCGCATGCACCGTGGCGCTGCCGGTATAAGAG      <  2:1256925/150‑1                                                                                                                                                       CCTGAATCAGGCGATGCGCACGCCCGGTCAGGCCATTCAGACGCAGGTTGCGTTCTGCCCATTCCAGATAAGTACGCGACATATCCACGGTGGTGGTGCTGCGTGCACCGCCTAATCCCGCATGCACGGTGGCGCTGCCGGTATAAGAGA     >  1:6710/1‑150                                                                                                                                                         TGAATCAGGCGATGCGCACGCCCGGTCAGGCCATTCAGACGCAGGTTGCGTTCTGCCCATTCCAGATAAGTACGCGACATATCCACGGTGGTGGTGCTGCGTGCACCGCCTAATCCCGCATGCACGGTGGCGCTGCCGGTATAAGAGAAC   <  1:346168/150‑1                                                                                                                                                         TGAATCAGGCGATGCGCACGCCCGGTCAGGCCATTCAGACGCAGGTTGCGTTCTGCCCATTCCAGATAAGTACGCGACATATCCACGGTGGTGGTGCTGCGTGCACCGCCTAATCCCGCATGCACGGTGGCGCTGCCGGTATAAGAGAAC   <  2:139753/150‑1                                                                                                                                                          GAATCAGGCGATGCGCACGCCCGGTCAGGCCATTCAGACGCAGGTTGCGTTCTGCCCATTCCAGATAAGTACGCGACATATCCACGGTGGTGGTGCTGCGTGCACCGCCTAATCCCGCATGCACGGTGGCGCTGCCGGTATAAGAGAACA  <  1:543109/150‑1                                                                                                                                                          GAATCAGGCGATGCGCACAACCGGTAAGGCCATTCAGACGAAGTTTGAGTTATGACCATACAAGATAAGTACGCGACATATACACGGTGGTGGTGCTGCGTGCACCGCCTAATCCCGCATGCACGGTGGCGCTGCCGGTATAAGAGAACA  >  2:1260050/1‑150                                                                                                                                                                                                                                                                                                                 GATGAGCAAAGGCAAAGATTTCCTCAACCTGTTCTCTTATACCGGCAGCGCCACCGTGCATGCGGGATTAGGCGGTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1009448‑1009602 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgaATCAGGCGATGCGCACGCCCGGTCAGGCCATTCAGACGCAGGTTGCGTTCTGCCCATTCCAGATAAGTACGCGACATATCCACGGTGGTGGTGCTGCGTGCACCGCCTAATCCCGCATGCACGGTGGCGCTGCCGGTATAAGAGAACA  <  NC_000913/1009624‑1009477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.