New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 1084726 | NA (NA) | 3 (0.030) | 3/258 | NT | NA | intergenic (+79/‑266) | efeB/phoH | heme‑containing peroxidase/deferrochelatase/ATP‑binding protein PhoH |
? | NC_000913 | = 1084773 | NA (NA) | intergenic (+126/‑219) | efeB/phoH | heme‑containing peroxidase/deferrochelatase/ATP‑binding protein PhoH |
GGCGGCGGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1084570‑1084726 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcagtgcACGATCGCCGGATGCGGCGTGAACGCCTTATCCAGCCTACCAAACCCGCACTGATTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCT < NC_000913/1084773‑1084627 GGCGGCGGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAA > 2:1300630/1‑150 CGGCGGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATC < 1:827497/150‑1 GCGGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAG < 1:735697/150‑1 GCGGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAG < 2:1588881/150‑1 GGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTG > 2:1109852/1‑150 GGTTATTTTTTTGCGCGGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTG < 1:110590/150‑1 ATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCACG > 1:838621/1‑150 TATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCACGATCGCCGGATGCGGCGTGAACGCCTTATCCAGCCTACCAAACCCGCACTGATTG < 1:1672625/150‑1 TTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCACGATCGCCGGATGCGGCGTGAACGCCTTATCCAGCCTACCAAACCCGCACTGATTGTA < 2:838621/150‑1 GCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCACGATCGCCGGATGCGGCGTGAACGCCTTATCCAGCCTACCAAACCCGCACTGATTGTAGG < 1:261768/150‑1 TCAGTGCACGATCGCCGGATGCGGCGTGAACGCCTTATCCAGCCTACCAAACCAGCACTGATTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACG < 1:1195182/150‑1 CAGTGCACGATCGCCGGATGCGGCGTGAACGCCTTATCCAGCCTACCAAACCCGCACTGATTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGC > 2:380358/1‑150 GTGCACGATCGCCGGATGCGGCGTGAACGCCTTATCCAGCCTACCAAACCCGCACTGATTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGC > 1:180264/1‑150 TGCACGATCGCCGGATGCGGCGTGAACGCCTTATCCAGCCTACCAAACCCGCACTGATTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCT < 1:1283943/150‑1 TGCACGATCGCCGGATGCGGCGTGAACGCCTTATCCAGCCTACCAAACCCGCACTGATTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCT < 2:983855/150‑1 GGCGGCGGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1084570‑1084726 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcagtgcACGATCGCCGGATGCGGCGTGAACGCCTTATCCAGCCTACCAAACCCGCACTGATTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCT < NC_000913/1084773‑1084627 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |