| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1086080 | 100 (1.050) | 11 (0.120) | 8/260 | NT | 10.0% | intergenic (+24/+26) | phoH/pgaD | ATP‑binding protein PhoH/poly‑N‑acetyl‑D‑glucosamine synthase subunit PgaD |
| ? | NC_000913 | = 1086085 | 103 (1.140) | intergenic (+29/+21) | phoH/pgaD | ATP‑binding protein PhoH/poly‑N‑acetyl‑D‑glucosamine synthase subunit PgaD | |||||
CCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGTTCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1085935‑1086080‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcccggTTCGCCCGGGCTCTGCACCGATAACACACTTAACTGTAGGCATGCAGCGTACGTTGGCAAAGTGCCGAACGTACGCAGTCCTCTTTACCGAACCGGACGATCCCAACCATTTCATCTTCTTCGAAACGTTCCAGCGCGTCACTTAATCC < NC_000913/1086085‑1085937 CCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGTTCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGTTCG > 2:176759/1‑150 GACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGTTCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGTTCGCCCGGGCTCTG < 2:338898/150‑1 ACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGTTCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGTTCGCCCGGGCTCTGC < 1:176759/150‑1 GCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGTTCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGTTCGCCCGGGCTCTGCACCG < 2:121371/150‑1 GAAGAAGATGAAATGGTTGGGATCGTCCGGTTCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGTTCGCCCGGGCTCTG < 1:1531369/132‑1 GAAGAAGATGAAATGGTTGGGATCGTCCGGTTCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGTTCGCCCGGGCTCTG > 2:1531369/1‑132 GATCGTCCGGTTCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTATGTGTGTTATCTGTGCAGAGCCCGGTTCGCCCGGGCTCTGCACCTATAACACACTTAACTGTAGGCATGCAGCGTACG < 2:104340/150‑1 GCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGTTCGCCCGGGCTCTGCACCGAT > 1:1456837/1‑93 GCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGTTCGCCCGGGCTCTGCACCGAT > 1:1462526/1‑93 GCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGTTCGCCCGGGCTCTGCACCGAT < 2:1456837/93‑1 GCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGTTCGCCCGGGCTCTGCACCGAT < 2:1462526/93‑1 GTGCAGAGCCCGGTTCGCCCGGGCTCTGCACCGATAACACACTTAACTGTAGGCATGCAGCGTACGTTGGCAAAGTGCCGAACGTACGCAGTCCTCTTTACCGACCCGGACGATCCCACCCATTTCATCTTCTTCGAAACGTTCCAGCGC > 1:1327734/1‑150 AGCCCGGTTCGCCCGGGCTCTGCACCGATAACACACTTAACTGTAGGCATGCAGCGTACGTTGGCAAAGTGCCGAACGTACGCAGTCCTCTTTACCGAACCGGACGATCCCAACCATTTCATCTTCTTCGAAACGTTCCAGCGCGTCACT < 2:826914/150‑1 GCCCGGTTCGCCCGGGCTCTGCACCGATAACACACTTAACTGTAGGCATGCAGCGTACGTTGGCAAAGTGCCGAACGTACGCAGTCCTCTTTACCGAACCGGACGATCCCAACCATTTCATCTTCTTCGAAACGTTCCAGCGCGTCACTT < 1:1527858/150‑1 GCCCGGTTCGCCCGGGCTCTGCACCGATAACACACTTAACTGTAGGCATGCAGCGTACGTTGGCAAAGTGCCGAACGTACGCAGTCCTCTTTACCGAACCGGACGATCCCAACCATTTCATCTTCTTCGAAACGTTCCAGCGCGTCACTT < 1:1429432/150‑1 GCCCGGTTCGCCCGGGCTCTGCACCGATAACACACTTAACTGTAGGCATGCAGCGTACGTTGGCAAAGTGCCGAACGTACGCAGTCCTCTTTACCGAACCGGACGATCCCAACCATTTCATCTTCTTCGAAACGTTCCAGCGCGTCACTT < 1:1392272/150‑1 CCCGGTTCGCCCGGGCTCTGCACCGATAACACACTTAACTGTAGGCATGCAGCGTACGTTGGCAAAGTGCCGAACGTACGCAGTCCTCTTTACCGAACCGGACGATCCCAACCATTTCATCTTCTTCGAAACGTTCCAGCGCGTC > 1:239457/1‑145 CCCGGTTCGCCCGGGCTCTGCACCGATAACACACTTAACTGTAGGCATGCAGCGTACGTTGGCAAAGTGCCGAACGTACGCAGTCCTCTTTACCGAACCGGACGATCCCAACCATTTCATCTTCTTCGAAACGTTCCAGCGCGTC < 2:239457/145‑1 GTTCGCCCGGGCTCTGCACCGATAACACACTTAACTGTAGGCATGCAGCGTACGTTGGCAAAGTGCCGAACGTACGCAGTCCTCTTTACCGAACCGGACGATCCCAACCATTTCATCTTCTTCGAAACGTTCCAGCGCGTCACTTAATCC < 2:575674/150‑1 CCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGTTCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1085935‑1086080‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcccggTTCGCCCGGGCTCTGCACCGATAACACACTTAACTGTAGGCATGCAGCGTACGTTGGCAAAGTGCCGAACGTACGCAGTCCTCTTTACCGAACCGGACGATCCCAACCATTTCATCTTCTTCGAAACGTTCCAGCGCGTCACTTAATCC < NC_000913/1086085‑1085937 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |