| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1799166 | 114 (1.200) | 6 (0.070) | 5/256 | NT | 5.3% | intergenic (‑224/+60) | pheS/pheM | phenylalanine‑‑tRNA ligase subunit alpha/pheST‑ihfA operon leader peptide |
| ? | NC_000913 | = 1799170 | 109 (1.230) | intergenic (‑228/+56) | pheS/pheM | phenylalanine‑‑tRNA ligase subunit alpha/pheST‑ihfA operon leader peptide | |||||
ACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1799012‑1799166‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagcctccCAGTGGAGGCTTTTTTTGTATGCGCGTTTTGAAAAATAAAAAGCCTGTCTCATCAGGTGTAATTGTCGCAGCCAGACTGGACACGGCCAGCGCGGAGAAACCGGAGCGTATTTAAGTACGTGAGAATTTCGAGCACAGCCCGGGACCAA < NC_000913/1799170‑1799022 ACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTAGTCCTGATGAGACATGCTTTTTATTTTTCAAAACTCTCATACAAAAAAAG < 2:528980/150‑1ACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAG < 1:167121/150‑1 CTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGC > 2:814896/1‑150 TTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCC < 1:146174/150‑1 TTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCC > 1:158298/1‑150 TTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCC < 1:504117/150‑1 CCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCC < 2:1094518/150‑1 GTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCCAGTGGAG > 2:670639/1‑150 CTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACTATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCCAGTGGAGGCTTTTTT < 2:490269/150‑1 CTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCCAGTGGAGGCTTTTTT < 1:670639/150‑1 TCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCCAGTGGAGGCTTTTTTTGTATGCGCGTTTTGAAAAATAAAAAGCCTGTC > 1:875718/1‑150 GTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCCAGTGGAGGCTTTTTTTGTATGCGCGTTTTGAAAAATAAAAAGCCTGTCTCATCAGGTGTAATTGTCGCA < 2:875718/150‑1 TCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCCAGTGGAGGCTTTTTTTGTATGCGCGTTTTGAAAAATAAAAAGCCTGTCTCATCAGGTGTAATTGTCGCAGCC < 2:718348/150‑1 GCCTCCCAGTGGAGGCTTTTTTTGTATGCGCGTTTTGAAAAATAAAAAGCCTGTCTCATCAGGTGTAATTGTCGCAGCCAGACTGGACACGGCCAGCGCGGAGAAACCGGAGCGTATTTAAGTACGTGAGAATTTCGAGCACAGCCCGGG < 1:1356332/150‑1 GCCTCCCAGTGGAGGCTTTTTTTGTATGCGCGTTTTGAAAAATAAAAAGCCTGTCTCATCAGGTGTAATTGTCGCAGCCAGACTGGACACGGCCAGCGCGGAGAAACCGGAGCGTATTTAAGTACGTGAGAATTTCGAGCACAGCCCGGG < 2:859686/150‑1 CTCCCAGTGGAGGCTTTTTTTGTATGCGCGTTTTGAAAAATAAAAAGCCTGTCTCATCAGGTGTAATTGTCGCAGCCAGACTGGACACGGCCAGCGCGGAGAAACCGGAGCGTATTTAAGTACGTGAGAATTTCGAGCACAGCCCGGGAC > 2:748748/1‑150 CTCCCAGTGGAGGCTTTTTTTGTATGCGCGTTTTGAAAAATAAAAAGCCTGTCTCATCAGGTGTAATTGTCGCAGCCAGACTGGACACGGCCAGCGCGGAGAAACCGGAGCGTATTTAAGTACGTGAGAATTTCGAGCACAGCCCGGGAC < 2:1647054/150‑1 CCCAGTGGAGGCTTTTTTTGTATGCGCGTTTTGAAAAATAAAAAGCCTGTCTCATCAGGTGTAATTGTCGCAGCCAGACTGGACACGGCCAGCGCGGAGAAACCGGAGCGTATTTAAGTACGTGAGAATTTCGAGCACAGCCCGGGACCA > 1:1203974/1‑150 CCAGTGGAGGCTTTTTTTGTATGCGCGTTTTGAAAAATAAAAAGCCTGTCTCATCAGGTGTAATTGTCGCAGCCAGACTGGACACGGCCAGCGCGGAGAAACCGGAGCGTATTTAAGTACGTGAGAATTTCGAGCACAGCCCGGGACCAA < 2:269680/150‑1 ACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1799012‑1799166‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagcctccCAGTGGAGGCTTTTTTTGTATGCGCGTTTTGAAAAATAAAAAGCCTGTCTCATCAGGTGTAATTGTCGCAGCCAGACTGGACACGGCCAGCGCGGAGAAACCGGAGCGTATTTAAGTACGTGAGAATTTCGAGCACAGCCCGGGACCAA < NC_000913/1799170‑1799022 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |