New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2595619 =78 (0.820)4 (0.040) 4/264 NT 5.4% coding (241/2016 nt) tmcA tRNA(Met) cytidine acetyltransferase
?NC_000913 2595653 = 64 (0.700)coding (207/2016 nt) tmcA tRNA(Met) cytidine acetyltransferase

ACTGGCTGTGGATTTCGCCGCGGCCAGATGCTGAAAACCACTGTTCTCCCTCGGCACTACAAACTTTACTTGGGCGCGAGTTCCGGCATGCGGTATTCGACGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2595723‑2595619
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccAAGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGC  >  NC_000913/2595653‑2595801
                                                                                                                                                                                                                                                              
ACTGGCTGTGGATTTCGCCGCGGCCAGATGCTGAAAACCACTGTTCTCCCTCGGCACTACAAACTTTACTTGGGCGCGAGTTCCGGCATGCGGTATTCGACGCCCAAGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATC                                                                                                          <  2:856785/150‑1
                                                                   ACTTGGGCGCGAGTTCCGGCATGCGGTATTCGACGCCCAAGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCA                                                               <  1:388605/126‑1
                                                                   ACTTGGGCGCGAGTTCCGGCATGCGGTATTCGACGCCCAAGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCA                                                               >  2:388605/1‑126
                                                                    CTTGGGCGCGAGTTCCGGCATGCGGTATTCGACGCCCAAGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAAa                                      >  2:1103488/1‑149
                                                                                                       CCAAGTAAAGTTTGTAGTGCCGAGCGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGG   >  2:1212961/1‑150
                                                                                                        CAAGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGC  >  1:263635/1‑150
                                                                                                                                                                                                                                                              
ACTGGCTGTGGATTTCGCCGCGGCCAGATGCTGAAAACCACTGTTCTCCCTCGGCACTACAAACTTTACTTGGGCGCGAGTTCCGGCATGCGGTATTCGACGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2595723‑2595619
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccAAGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGC  >  NC_000913/2595653‑2595801

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.