| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2703241 = | 67 (0.700) | 5 (0.050) | 5/268 | NT | 6.8% | coding (146/906 nt) | era | 30S ribosomal subunit maturation GTPase Era |
| ? | NC_000913 | 2703278 = | 71 (0.760) | coding (109/906 nt) | era | 30S ribosomal subunit maturation GTPase Era | |||||
CTGGAATGAGCATCGATAAAAGTTACTGCGGATTTATTGCCATCGTCGGACGTCCGAACGTTGGCAAATCCACATTGTTGAACAAACTGCTGGGGCAGAAAATCTCCATCACTTCCCGCAAGGCGCAGACAACTCGTCACCGCATTGT‑GGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2703391‑2703241‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCGACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCC > NC_000913/2703278‑2703425 CTGGAATGAGCATCGATAAAAGTTACTGCGGATTTATTGCCATCGTCGGACGTCCGAACGTTGGCAAATCCACATTGTTGAACAAACTGCTGGGGCAGAAAATCTCCATCACTTCCCGCAAGGCGCAGACAACTCGTCACCGCATTGT‑GG < 2:777022/150‑1 AGAAAATCTCCATCACTTCCCGCAAGGCGCAGACAACTCGTCACCGCATTGT‑GGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCGACGATGGCAATAAATCCGCAGTAACTT > 2:1027183/1‑150 AAAATATCCATCACTTACCGCAAGGCGCAGACAACTCGTCACCGCATTGTGGGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCGACGATGGCAATAAATCCGCAGTAACTTT > 2:522946/1‑150 CTCCATCACTTCCCGCAAGGCGCAGACAACTCGTCACCGCATTGT‑GGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCGACGATGGCAATAAATCCGCAGTAACTTTTATCGA > 1:734055/1‑150 CCATCACTTCCCGCAAGGCGCAGACAACTCGTCACCGCATTGT‑GGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCGACGATGGCAATAAATCCGCAGTAACTTTTATCGATG > 2:1653864/1‑150 CTTCCCGCAAGGCGCAGACAACTCGTCACCGCATTGT‑GGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCGACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATT > 1:1372225/1‑150 ATTGT‑GGGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCGACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCG < 1:1027183/150‑1 GGAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCGACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCC < 1:1364493/150‑1 CTGGAATGAGCATCGATAAAAGTTACTGCGGATTTATTGCCATCGTCGGACGTCCGAACGTTGGCAAATCCACATTGTTGAACAAACTGCTGGGGCAGAAAATCTCCATCACTTCCCGCAAGGCGCAGACAACTCGTCACCGCATTGT‑GGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2703391‑2703241‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggAAGTGATGGAGATTTTCTGCCCCAGCAGTTTGTTCAACAATGTGGATTTGCCAACGTTCGGACGTCCGACGATGGCAATAAATCCGCAGTAACTTTTATCGATGCTCATTCCAGCTCCAGTTTTTTCAACGCCTGTTCGGCGGCAGCC > NC_000913/2703278‑2703425 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |