New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1286594 =NA (NA)11 (0.120) 8/260 NT NA intergenic (+68/‑115) narI/ychS nitrate reductase A subunit gamma/putative uncharacterized protein YchS
?NC_000913 1286619 = NA (NA)noncoding (25/29 nt) other REPv108a

CTCGCGTCTGATACACATCTGGAGCGTACCGGTGGAGTATCTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGC  >  NC_000913/1286448‑1286742
                                                                                                                                                  |                                                                                                                                                    
gcaacgacccgaagggcgaagcgcgcagcgctgagtaatccttcccccaccaccatcgcttccttaaataatcaaaacctgttactccgagctaattttgcccgatggcaccacgtttaccgggcctacaatatcctcccctgtagGTCg                                                                                                                                                   >  1:1064272‑M1/147‑150 (MQ=255)
gcaacgacccgaagggcgaagcgcgcagcgctgagtaatccttcccccaccaccatcgcttccttaaataatcaaaacctgttactccgagctaattttgcccgatggcaccacgtttaccgggcatacaatatcctcccctgtagGTCg                                                                                                                                                   <  2:1163669‑M1/4‑1 (MQ=255)
ctcGCGTCTGATGCACATCTGGAGCGTACCGGTGGAGTATCTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCg                                                                                                                                                   <  2:1085511/150‑1 (MQ=255)
 caacgacccgaagggcgaagcgcgcagcgctgagtaatccttcccccaccaccatcgcttccttaaataatcaaaacctgttactccgagctaattttgcccgatggcaccacgtttaccgggcctacaatatcctcccctgtagGTCgg                                                                                                                                                  >  2:1434019‑M1/146‑150 (MQ=255)
   gcgTCTGATACACATCTGGAGCGTACCGGTGGAGTATCTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGAt                                                                                                                                                >  1:1041425/1‑150 (MQ=255)
   acgacccgaagggcgaagcgcgcagcgctgagtaatccttcccccaccaccatcgcttccttaaataatcaaaacctgttactccgagctaattttgcccgatggcaccacgtttaccgggcctacaatatcctcccctgtagGTCGGAt                                                                                                                                                >  2:179649‑M1/144‑150 (MQ=255)
   acgacccgaagggcgaagcgcgcagcgctgagtaatccttcccccaccaccatcgcttccttaaataatcaaaacctgttactccgagctaattttgcccgatggcaccacgtttaccgggcctacaatatcctcccctgtagGTCGGAt                                                                                                                                                <  1:981358‑M1/7‑1 (MQ=255)
      tCTGATACACATCTGGAGCGTACCGGTGGAGTATCTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATgcg                                                                                                                                             >  2:1137881/1‑150 (MQ=255)
       cTGATACACATCTGGAGCGTACCGGTGGAGTATCTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATgcgc                                                                                                                                            <  1:964813/150‑1 (MQ=255)
        tGATACACAACTGGAGCGTACCGGTGTAGTATATGAAACGTAAGTAACAGCTCCTGCGCGCTCGACACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGcgct                                                                                                                                           >  2:415707/1‑150 (MQ=255)
         cgaagggcgaagcgcgcagcgctgagtaatccttcccccaccaccatcgcttccttaaataatcaaaacctgttactccgagctaattttgcccgatggcaccacgtttaccgggcctacaatatcctcccctgtagGTCGGATGcgctt                                                                                                                                          <  2:1457641‑M1/13‑1 (MQ=255)
            acacATCTGGAGCGTACCGGTGGAGTATCTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGcgcttcgc                                                                                                                                       <  1:159893/150‑1 (MQ=255)
             cacaTCTGGAGCGTACCGGTGGAGTATCTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGcgcttcgct                                                                                                                                      >  2:368939/1‑150 (MQ=255)
             cacaTCTGGAGCGTACCGGTGGAGTATATGAAACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAACCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTATTTTATGGGAACGGTGCGGGGTGACTTGTCGGATGcgcttcgct                                                                                                                                      >  2:775182/1‑150 (MQ=255)
               caTCTGGAGCGTACCGGTGGAGTATCTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTa                                                                                                                                    >  1:615982/1‑150 (MQ=255)
               caTCTGGAGCGTACCGGTGGAGTATCTGACACGTAAGTACCAGCTGGTGCGCGCTCGTAACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTa                                                                                                                                    >  2:1393044/1‑150 (MQ=255)
                  cTGGAGCGTACCGGTGGAGTATCTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATcc                                                                                                                                 <  1:1392561/150‑1 (MQ=255)
                   agcgcgcagcgctgagtaatccttcccccaccaccatcgcttccttaaataatcaaaacctgttactccgagctaattttgcccgatggcaccacgtttaccgggcctacaatatcctcccctgtagGTCGGATGCGCTTCGCTTATCCg                                                                                                                                >  2:1408960‑M1/128‑150 (MQ=255)
                    ggAGCGTACCGGTGGAGTATCTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGa                                                                                                                               >  1:854878/1‑150 (MQ=255)
                    ggAGCGTACCGGTGGAGTATCTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGCGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGa                                                                                                                               >  2:999550/1‑150 (MQ=255)
                     cgcgcagcgctgagtaatccttcccccaccaccatcgcttccttaaataatcaaaacctgttactccgagctaattttgcccgatggcaccacgtttaccgggcctacaatatcctcccctgtagGTCGGATGCGCTTCGCTTATCCGAc                                                                                                                              >  1:912265‑M1/126‑150 (MQ=255)
                      gcggagcgctgagtaatccttcccccaccaccatcgcttccttaaataatcaaaacctgttactccgagctaattttgcccgatggcaccacgtttaccgggcctacaatatcctcccctgtagGTCGGATGCGCTTCGCTTATCCGAcc                                                                                                                             >  2:603234‑M1/125‑150 (MQ=255)
                      gcgcagcgctgagtaatccttcccccaccaccatcgcttccttaaataatcaaaacctgttactccgagctaattttgcccgatggcaccacgtttaccgggcctacaatatcctcccctgtagGTCGGATGCGCTTCGCTTATCCGAcc                                                                                                                             >  1:1457641‑M1/125‑150 (MQ=255)
                      gcgcagcgctgagtaatccttcccccaccaccatcgcttccttaaataatcaaaacctgttactccgagctaattttgcccgatggcaccacgtttaccgggcctacaatatcctcccctgtagGTCGGATGCGCTTCGCTTATCCGAcc                                                                                                                             >  1:448146‑M1/125‑150 (MQ=255)
                      gcgcagcgctgagtaatccttcccccaccaccatcgcttccttaaataatcaaaacctgttactccgagctaattttgcccgatggcaccacgtttaccgggcctacaatatcctcccctgtagGTCGGATGCGCTTCGCTTATCCGAcc                                                                                                                             >  1:420326‑M1/125‑150 (MQ=255)
                      aGCGTACCGGTGGAGTATCTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATGCGAcc                                                                                                                             >  1:355151/1‑150 (MQ=255)
                      aGCGTACCGGTGGAGTATCTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGGTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGAcc                                                                                                                             >  2:1091406/1‑150 (MQ=255)
                       cgcagcgctgagtaatccttcccccaccaccatcgcttccttaaataatcaaaacctgttactccgagctaattttgcccgatggcaccacgtttaccgggcctacaatatcctcccctgtagGTCGGATGCGCTTCGCTTATCCGACCt                                                                                                                            >  1:856122‑M1/124‑150 (MQ=255)
                          tACCGGTGGAGTATCTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACa                                                                                                                         >  1:1421549/1‑150 (MQ=255)
                                 ggAGTATCTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGggagg                                                                                                                  <  2:1041425/150‑1 (MQ=255)
                                   aGTATCTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGat                                                                                                                >  2:1080057/1‑150 (MQ=255)
                                       ccttcccccaccaccatcgcttccttaaataatcaaaacctgttactccgagctaattttgcccgatggcaccacgtttaccgggcctacaatatcctcccctgtagGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATGTTg                                                                                                            >  1:439090‑M1/108‑150 (MQ=255)
                                        cTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGt                                                                                                           >  2:581643/1‑150 (MQ=255)
                                        cTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGt                                                                                                           >  1:374324/1‑150 (MQ=255)
                                        cTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGt                                                                                                           >  2:1028978/1‑150 (MQ=255)
                                         tGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTa                                                                                                          <  1:420277/150‑1 (MQ=255)
                                          gACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAg                                                                                                         >  2:500024/1‑150 (MQ=255)
                                            ccccaccaccatcgcttccttaaataatcaaaacctgttactccgagctaattttgcccgatggcaccacgtttaccgggcctacaatatcctcccctgtagGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGata                                                                                                               <  1:1099332‑M1/40‑1 (MQ=255)
                                            ccccaccaccatcgcttccttaaataatcaaaacctgttactccgagctaattttgcccgatggcaccacgtttaccgggcctacaatatcctcccctgtagGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGata                                                                                                               >  2:1099332‑M1/103‑142 (MQ=255)
                                            cacGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGc                                                                                                       <  2:1310671/150‑1 (MQ=255)
                                              cGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGccc                                                                                                     <  2:955898/150‑1 (MQ=255)
                                                  aGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTa                                                                                                          <  1:967979/141‑1 (MQ=255)
                                                  aGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTa                                                                                                          >  2:967979/1‑141 (MQ=255)
                                                     aCCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAAc                                                                                              >  2:578151/1‑150 (MQ=255)
                                                       cAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACgt                                                                                            >  1:233579/1‑150 (MQ=255)
                                                         gCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACgtgg                                                                                          <  1:1635214/150‑1 (MQ=255)
                                                               gcgcgcTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCAt                                                                                    >  2:1028299/1‑150 (MQ=255)
                                                                cgcgcTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATc                                                                                   >  1:369893/1‑150 (MQ=255)
                                                                  cgcTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCgg                                                                                 >  1:1238249/1‑150 (MQ=255)
                                                                   gcTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCggg                                                                                <  1:500024/150‑1 (MQ=255)
                                                                   gcTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCggg                                                                                <  1:120494/150‑1 (MQ=255)
                                                                    cTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGc                                                                               >  1:1009706/1‑150 (MQ=255)
                                                                     tCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCa                                                                              <  2:1254930/150‑1 (MQ=255)
                                                                      cGTCACTAAGCGAGTTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCaa                                                                             >  2:304018/1‑150 (MQ=255)
                                                                        tCACTAAGCGAATTTTAGTTCACATAGACGCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCaaaa                                                                           <  1:1330362/150‑1 (MQ=255)
                                                                             aaGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGc                                                                      <  1:1230761/150‑1 (MQ=255)
                                                                             aaGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATACGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGc                                                                      >  2:1487298/1‑150 (MQ=255)
                                                                              aGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCt                                                                     >  2:428231/1‑150 (MQ=255)
                                                                              aGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCt                                                                     >  1:861246/1‑150 (MQ=255)
                                                                                 gAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCgg                                                                  <  1:368939/150‑1 (MQ=255)
                                                                                 gAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCgg                                                                  <  1:434638/150‑1 (MQ=255)
                                                                                 gAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCgg                                                                  <  1:1612503/150‑1 (MQ=255)
                                                                                   aTTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAg                                                                <  1:1080057/150‑1 (MQ=255)
                                                                                           tCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGt                                                        >  1:639266/1‑150 (MQ=255)
                                                                                             acaTAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGt                                                               <  2:933685/141‑1 (MQ=255)
                                                                                             acaTAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGt                                                               >  1:933685/1‑141 (MQ=255)
                                                                                             acaTAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGttt                                                      <  2:724905/150‑1 (MQ=255)
                                                                                              caTAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGtttt                                                     >  1:709821/1‑150 (MQ=255)
                                                                                                tAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGa                                                   >  2:804518/1‑150 (MQ=255)
                                                                                                 aGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGat                                                  <  2:258388/150‑1 (MQ=255)
                                                                                                         cTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAg                                          <  2:1351279/150‑1 (MQ=255)
                                                                                                         cTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAg                                          <  1:581643/150‑1 (MQ=255)
                                                                                                            cggcggGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGaa                                       >  1:271201/1‑150 (MQ=255)
                                                                                                               cggGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCg                                    >  2:341782/1‑150 (MQ=255)
                                                                                                                ggggTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGa                                   <  2:1238249/150‑1 (MQ=255)
                                                                                                                ggggTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGa                                   >  1:117917/1‑150 (MQ=255)
                                                                                                                  ggTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGAtg                                 >  2:784906/1‑150 (MQ=255)
                                                                                                                        tttATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGAtggtggtg                           >  1:460088/1‑150 (MQ=255)
                                                                                                                        tttATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGAtggtggtg                           >  1:1272669/1‑150 (MQ=255)
                                                                                                                          tATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGATGGTGGTggg                         >  1:513187/1‑150 (MQ=255)
                                                                                                                          tATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGATGGTGGTggg                         <  2:233579/150‑1 (MQ=255)
                                                                                                                           aTGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGATGGTGGTgggg                        <  1:1028299/150‑1 (MQ=255)
                                                                                                                            tGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGATGGTGGTggggg                       >  2:749671/1‑150 (MQ=255)
                                                                                                                              ggCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGATGGTGGTGGGGGaa                     >  2:981358/1‑150 (MQ=255)
                                                                                                                               gCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGATGGTGGTGGGGGAAg                    <  2:477233/150‑1 (MQ=255)
                                                                                                                                cACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCGTATCCGACCTAGAGGGGAGGATATTGTAGGCCCGGTAATCGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGATGGTGGTGGGGGAAgg                   <  2:694953/150‑1 (MQ=255)
                                                                                                                                 aCGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGATGGTGGTGGGGGAAGGa                  <  2:615982/150‑1 (MQ=255)
                                                                                                                                     tGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGATGGTGGTGGGGGAAGGATTAc              <  2:821308/150‑1 (MQ=255)
                                                                                                                                      gCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGATGGTGGTGGGGGAAGGATTACt             <  1:775182/150‑1 (MQ=255)
                                                                                                                                         gggTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGATGGTGGTGGGGGAAGGATTACTCAg          <  1:1614831/150‑1 (MQ=255)
                                                                                                                                            tGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGATGGTGGTGGGGGAAGGATTACTCAgcgc       <  2:1421549/150‑1 (MQ=255)
                                                                                                                                               gTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGATGGTGGTGGGGGAAGGATTACTCAGCGCTgc    <  1:415707/150‑1 (MQ=255)
                                                                                                                                               gTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGATGGTGGTGGGGGAAGGATTACTCAGCGCTgc    <  1:1028978/150‑1 (MQ=255)
                                                                                                                                                 tGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGATGGTGGTGGGGGAAGGATTACTCAGCGCTgcgc  <  2:266992/150‑1 (MQ=255)
                                                                                                                                                 tGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGATGGTGGTGGGGGAAGGATTACTCAGCGCTgcgc  <  2:369893/150‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
CTCGCGTCTGATACACATCTGGAGCGTACCGGTGGAGTATCTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAAGCGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTCGGATGCGCTTCGCTTATCCGACCTACAGGGGAGGATATTGTAGGCCCGGTAAACGTGGTGCCATCGGGCAAAATTAGCTCGGAGTAACAGGTTTTGATTATTTAAGGAAGCGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGC  >  NC_000913/1286448‑1286742

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.