| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,552,271 | T→C | 10.7% | intergenic (+280/+127) | fdnI → / ← yddM | formate dehydrogenase N subunit gamma/putative DNA‑binding transcriptional regulator YddM |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,552,271 | 0 | T | C | 10.7% | 239.2 / 16.4 | 90 | intergenic (+280/+127) | fdnI/yddM | formate dehydrogenase N subunit gamma/putative DNA‑binding transcriptional regulator YddM |
| Reads supporting (aligned to +/- strand): ref base T (43/36); new base C (7/2); total (50/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.15e-01 | |||||||||||
TAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTA > NC_000913/1552122‑1552420 | tAGATTGCAGTGAACGTGTTGGACTTATAACCGTAGCGCATGAGGCAATGTTTCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCtt < 2:821155/150‑1 (MQ=21) gCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCgg < 1:793010/150‑1 (MQ=255) cactGAACGTGTAGTCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTGCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGc < 2:548135/147‑1 (MQ=255) cAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTGATATTGTAGACTACGTAGGCTTTTTTCATTCCGGATGCGGCGTGAACGCCTTATCCGGc < 2:1519933/150‑1 (MQ=255) aGTGAACGTGTAGGCCTGATAAGCGTATCGCATCAGGCAATGTTGTGTTTTTTATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCa < 2:756241/150‑1 (MQ=255) ttaaCGTCTAGGACTCATAACGTTACCGCATCAGTCAATGTTTCTTTTTTATTCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATg < 2:94871/148‑1 (MQ=9) tgcaCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCTGATGCGGCGTGAACGCCTTATCCGGAATg < 2:84601/147‑1 (MQ=255) tGAACGTGTAGTCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTTTCATCAGTTTAAAATGGCTCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTTTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATg < 2:1387178/150‑1 (MQ=21) aaCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTGTAAAAGGAGACATTTTAATATTGGAGCAAACGTAGACATTGTTCATGCCGGATGCGGAGGGAACGGCTTAAGCTGCATGa‑‑a > 2:767213/1‑150 (MQ=18) gtgtAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAAc < 2:428464/150‑1 (MQ=255) tAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCt > 2:855834/1‑150 (MQ=255) aGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGAGTCATTTTAATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGGGTGAACGGCTTATACGGCATGA‑‑AAACCCtt > 2:132678/1‑150 (MQ=21) ggCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTc < 2:128593/150‑1 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGAGTCATTTTGTTATTGTATACAACGTAGGCTTTGTTAATGCCGGATGCGGCGTGAACGACTTATAAGGAATGA‑‑AAACCCTTCaa > 2:1255273/1‑150 (MQ=21) ccTGATAACCGTAGCGCATCAGGCAATGTGGCGTTTTTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCaa < 2:168516/150‑1 (MQ=255) cTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCTTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCaaa > 1:1610179/1‑150 (MQ=255) tGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAAt < 2:1273770/150‑1 (MQ=255) tGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTGTAAAAGGAGACATTTTAATATTGAATAAAAAGTAGGCTTTGTTCATACCCGATCCGGAGTGAACGCCTTATACTGCATGA‑‑AAACACTTCaaaa > 2:1338806/1‑149 (MQ=21) gATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAAcc > 2:72725/1‑141 (MQ=255) gATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAAcc < 1:72725/141‑1 (MQ=255) aTAAGCGTAGCGCATCAGGCAATGTTGCGTGTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATcc < 2:769128/150‑1 (MQ=255) cgtatatcATCAGGGAATGTTGATTTTGTCATCAGTTTGAAATGGCTCTGTAAAAGGCGTCATTTTCATATTGTAGTCAAGGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGTAATGA‑‑AAACCCTTCAAATCCAATAg < 2:1095988/143‑1 (MQ=17) cGTAGCTCATCATGCAATGTTGCGTTTTTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAg < 2:914816/150‑1 (MQ=255) cATCAGGCAATGTTGCCTTTGTCATCAGTTTCAAATGGCGCTGTAAAATTTTTCATTTTAATATTGTAGACAACTTAGGCTTTGTTCATGACTGATTAGGCGTTAACGCCTTTTCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAg < 2:592217/150‑1 (MQ=17) tCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTg < 1:855834/150‑1 (MQ=255) ggCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTGATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCAATATACGGCATGA‑‑AAACCCTTAAAATCCAATAGATTGCAGTGAAc > 1:1370665/1‑150 (MQ=17) tGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATa < 2:237990/150‑1 (MQ=255) tcatcaGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAg > 2:686734/1‑150 (MQ=40) catcaGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGc > 1:403751/1‑150 (MQ=40) catcaGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGc > 2:1364911/1‑150 (MQ=40) catcaGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTACCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGc > 2:1110895/1‑150 (MQ=255) caGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTa > 2:256519/1‑150 (MQ=38) caGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTa > 2:891233/1‑150 (MQ=38) caGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCATTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTa > 2:1656982/1‑150 (MQ=38) caGTTTCAAATGGAGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCTTGAACGCCTTAACCGGCATGA‑‑AAAACCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTa > 2:1656984/1‑150 (MQ=255) gTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGt < 1:360095/147‑1 (MQ=35) gTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGt > 2:360095/1‑147 (MQ=35) cAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCAt > 2:337398/1‑150 (MQ=32) cAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCAt > 2:1110026/1‑150 (MQ=32) aaTGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGGAGCGCCTCa > 2:1055424/1‑150 (MQ=17) gcgcTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:41284/1‑150 (MQ=32) cgcTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGAAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 2:224984/1‑150 (MQ=17) gTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGa‑‑a < 1:643402/82‑1 (MQ=33) gTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGtt > 2:1201375/1‑150 (MQ=32) gTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGtt > 2:857891/1‑150 (MQ=32) tAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTg > 1:202420/1‑150 (MQ=32) aGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGtt < 1:1110026/150‑1 (MQ=32) atatTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCt > 1:2954/1‑150 (MQ=31) tatTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTa > 1:1113155/1‑150 (MQ=32) atTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTaa > 2:389975/1‑150 (MQ=32) atTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTaa > 2:142999/1‑150 (MQ=32) aGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGgc > 2:1550894/1‑150 (MQ=34) aaCGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCtt > 2:467500/1‑150 (MQ=35) cGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTta > 2:807201/1‑150 (MQ=37) attAGGCTTTTTTCATTCAGTATCGTTCGTTAAGGCGTTATGCGGATTTA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTta < 1:219377/148‑1 (MQ=11) cTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGt < 1:224984/150‑1 (MQ=255) tCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCAtt > 1:1336621/1‑150 (MQ=255) tCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCAtt > 1:1263604/1‑150 (MQ=255) tCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCACTTTATAAAGCGCCAtt < 1:584202/150‑1 (MQ=255) cATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCAttt > 1:1229766/1‑150 (MQ=14) cATGCCCGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCACTTTATAAAGCGCCAttt < 1:847702/150‑1 (MQ=255) aTGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCAtt > 1:1602438/1‑150 (MQ=14) aTGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑ACACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCAtttt > 1:692295/1‑150 (MQ=14) aTGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCAtttt > 2:1389195/1‑150 (MQ=14) tGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCAttttt > 2:234942/1‑150 (MQ=14) gCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCAtttttt < 2:1215816/150‑1 (MQ=255) gCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑ACACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCAtttttt < 2:692295/150‑1 (MQ=17) gCCGGACGCGGCTTGATCTCCTAATCAGGCCTGA‑‑CAACCCTTCATTTTCACTTGACTGCAGTGCAGCCGTCGGCCCTACCTCCCTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCAtttttt < 1:1069937/150‑1 (MQ=12) ccGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTTTATAAAGAGACAttttaat > 2:899209/1‑147 (MQ=11) ccGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCAttttttt > 1:728877/1‑150 (MQ=17) aTGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTg < 2:64660/150‑1 (MQ=255) gcggcgTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCg < 1:132678/150‑1 (MQ=255) gcggcgGGAACGCCTTATCCGGCATGA‑‑AAACCCTTCCACTCCACTAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCg < 1:767213/150‑1 (MQ=255) aaggcgTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCg > 1:225541/3‑150 (MQ=255) ggcgTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCACTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTa > 2:1659685/1‑150 (MQ=255) gcgTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTaa > 1:189823/1‑150 (MQ=255) gcgTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTaa > 2:1551534/1‑150 (MQ=255) gcgTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTaa > 1:1558661/1‑150 (MQ=255) cgTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAAc > 2:427420/1‑150 (MQ=255) cgTGAACGCCTTATCCCGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAAc < 1:1255273/150‑1 (MQ=255) gTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAAcc < 1:807201/150‑1 (MQ=255) gTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAAcc < 1:1550894/150‑1 (MQ=255) tGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTa > 1:1476997/1‑139 (MQ=255) tGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTa < 2:1476997/139‑1 (MQ=255) tGAACGCCTAATCCCTCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGAAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCa < 1:968908/150‑1 (MQ=255) gAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAg > 1:1102480/1‑150 (MQ=255) aaCGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGa < 1:337398/150‑1 (MQ=255) cTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCg < 1:1289111/150‑1 (MQ=255) cTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCg < 2:41284/150‑1 (MQ=255) cTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCg < 1:899209/150‑1 (MQ=255) cTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGAAGGCg > 1:1091792/1‑150 (MQ=255) tATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTa > 1:474814/1‑150 (MQ=255) | TAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTA > NC_000913/1552122‑1552420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |