| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,648,349 | A→G | 5.8% | intergenic (+8/‑159) | dicA → / → ydfA | DNA‑binding transcriptional dual regulator DicA/Qin prophage; DUF1391 domain‑containing protein YdfA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,648,349 | 0 | A | G | 5.8% | 482.9 / 12.8 | 155 | intergenic (+8/‑159) | dicA/ydfA | DNA‑binding transcriptional dual regulator DicA/Qin prophage; DUF1391 domain‑containing protein YdfA |
| Reads supporting (aligned to +/- strand): ref base A (71/75); new base G (5/4); total (76/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 161 total aligned reads displayed.
TAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAAT > NC_000913/1648202‑1648498 | tAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCTGACAAATAAAAGATAACATCATAAAt > 2:721707/1‑150 (MQ=255) agagCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATg < 1:651820/150‑1 (MQ=255) agagCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATg > 1:1424533/1‑150 (MQ=255) gCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑Gt < 1:707705/150‑1 (MQ=255) tCCTTTAGCTGTTTAATGCACTGCCATAATCAGAACAGTATACCCAGCTCGCAGAAATTCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTa < 2:620506/150‑1 (MQ=255) ccTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTAt > 1:316618/1‑150 (MQ=255) ccTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTAt > 1:484174/1‑150 (MQ=255) cTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTTAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTagg > 2:794989/1‑148 (MQ=255) tGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCtt > 1:1196181/1‑150 (MQ=255) tGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCtt < 1:1418544/150‑1 (MQ=255) gCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTa < 2:484174/150‑1 (MQ=255) tGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTAcc < 2:33032/150‑1 (MQ=255) gTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCaa < 1:849316/133‑1 (MQ=255) gTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACca > 1:1527080/1‑150 (MQ=255) tttAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGATCTCTACTAAAAAACTTCAAAAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAAC‑TCATTGATGATGTTATCTTTTatttg < 1:1167506/150‑5 (MQ=38) ttAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACcaca < 2:1320004/150‑1 (MQ=255) aaTGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAAC‑TCATTGATGATGTTATCTTTTatttgtcc < 2:739734/150‑8 (MQ=38) aTGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCa > 2:1619392/1‑150 (MQ=255) gCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAAt > 1:427640/1‑150 (MQ=255) gCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAAt < 2:357735/150‑1 (MQ=255) cACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGTGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAAtt > 2:868871/1‑150 (MQ=255) cACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAAtt < 2:382660/150‑1 (MQ=255) tGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATg < 2:78807/150‑1 (MQ=255) gCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGt > 2:994146/1‑150 (MQ=255) gCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGt > 2:1431370/1‑150 (MQ=255) aGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAg < 2:1196181/150‑1 (MQ=255) gAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGc > 2:588773/1‑150 (MQ=255) cAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCtata > 2:1028192/1‑150 (MQ=255) gAACAGGATACCCATCTCGCCGAAATGCTATCTCGAGTAAAAAAATTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGTACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGc < 2:343265/150‑1 (MQ=255) ggATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACcac > 1:1022600/1‑124 (MQ=255) ggATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACcac < 2:1022600/124‑1 (MQ=255) aTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACaaa < 1:1228548/150‑1 (MQ=255) cccAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATc > 1:1124948/1‑150 (MQ=255) ccAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCa > 1:391142/1‑150 (MQ=255) ccAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCa < 2:628326/150‑1 (MQ=255) cAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCAc < 2:21486/150‑1 (MQ=255) aGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACt > 1:1214107/1‑150 (MQ=255) aGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACt < 2:838095/150‑1 (MQ=255) gCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACtt < 2:1424533/150‑1 (MQ=255) ccGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCg > 2:531224/1‑150 (MQ=255) cGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGa > 2:1483759/1‑150 (MQ=255) gAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGACAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGat < 2:37266/150‑1 (MQ=255) aaTGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGatat < 2:270952/150‑1 (MQ=255) tGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGt < 2:1269055/150‑1 (MQ=255) gCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGtt < 2:193400/150‑1 (MQ=255) gCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTc > 1:214690/1‑150 (MQ=255) cGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATg < 2:1584349/150‑1 (MQ=255) gAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATgg > 1:393866/1‑150 (MQ=255) aGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGc < 2:322177/150‑1 (MQ=255) aaaaCTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATc < 1:1436699/150‑1 (MQ=255) cTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGc < 1:567841/141‑1 (MQ=255) ttCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGtt < 2:1656551/150‑1 (MQ=255) tCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGttt < 1:1606444/150‑1 (MQ=255) aTAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCa < 2:427640/150‑1 (MQ=255) aTAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCa < 1:1281487/150‑1 (MQ=255) tAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGGATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCAt > 1:1047055/1‑150 (MQ=255) tAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCAt < 2:316618/150‑1 (MQ=255) tAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCAt < 1:116599/150‑1 (MQ=255) aCTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCaa < 2:393866/150‑1 (MQ=255) ctctTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCT‑ATCTTGTTTg < 2:574048/142‑1 (MQ=255) ctctTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCT‑ATCTTGTTTg > 1:574048/1‑142 (MQ=255) ctTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAacac > 2:1571094/1‑150 (MQ=255) ctTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAacac > 1:181616/1‑150 (MQ=255) ttGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAacacac > 1:32790/1‑150 (MQ=255) tGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACAcc < 1:1475242/150‑1 (MQ=255) aTTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATg < 2:848738/118‑1 (MQ=255) aTTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATg > 1:848738/1‑118 (MQ=255) aTTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAAt < 1:375006/124‑1 (MQ=255) ttACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGgt > 1:1486138/1‑150 (MQ=255) tACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGGTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGgtg > 2:1288489/1‑150 (MQ=255) aCTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGgtgt < 1:1571094/150‑1 (MQ=255) tAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTtc < 2:1124948/150‑1 (MQ=255) tAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTtc < 1:531224/150‑1 (MQ=255) aaaaGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTtct > 2:930832/1‑150 (MQ=255) aaaaGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTtct > 1:662894/1‑150 (MQ=255) aaGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGTGCGgtgtgttga < 1:621019/150‑6 (MQ=255) aaGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGTGCGgtgtgttga < 2:391142/150‑6 (MQ=255) aGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAg < 1:1028192/150‑1 (MQ=255) aGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAg < 2:1356727/150‑1 (MQ=255) gCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGTGCGgtgtgttgatg < 1:387309/150‑8 (MQ=255) gCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGTGCGgtgtgttgatg < 1:907824/150‑8 (MQ=255) gCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGc > 1:757957/1‑150 (MQ=255) cccGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCa < 2:1185225/150‑1 (MQ=255) ccGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCaa < 1:320814/150‑1 (MQ=255) ggACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTcc < 1:1431370/150‑1 (MQ=255) tgtggtAAAAGATAAC‑TCATTGATGATGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGc > 1:82109/6‑150 (MQ=38) aCAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGc < 1:1619392/150‑1 (MQ=255) cAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGATATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCCCACGGTGTTGACAGCAAACAGATCCGCt > 2:1609610/1‑150 (MQ=255) ggtAAAAGATAAC‑TCATTGATGATGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAc > 2:496109/3‑150 (MQ=255) aaTAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAc > 2:1275623/1‑150 (MQ=255) aaTAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAc > 2:1281596/1‑150 (MQ=255) gtAAAAGATAAC‑TCATTGATGATGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAcc > 2:105267/2‑150 (MQ=255) aTAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTTGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAcc < 1:1611542/150‑1 (MQ=255) aTAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAcc < 1:997925/150‑1 (MQ=255) aaaGATAAC‑TCATTGATGATGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTAATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAccccc > 1:1558848/1‑149 (MQ=255) aTAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGt < 2:1527080/150‑1 (MQ=255) aaCATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTcc < 1:1662996/135‑1 (MQ=255) tcatcaATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAggg < 2:893761/150‑1 (MQ=255) catcaATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAgggg > 2:566016/1‑150 (MQ=255) caATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGaaa > 2:1357489/1‑150 (MQ=255) | TAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGA‑GTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAAT > NC_000913/1648202‑1648498 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |