| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,165,143 | C→T | 7.3% | intergenic (+145/‑46) | baeR → / → yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,165,143 | 0 | C | T | 7.3% | 290.1 / 8.3 | 95 | intergenic (+145/‑46) | baeR/yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| Reads supporting (aligned to +/- strand): ref base C (43/45); new base T (5/2); total (48/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.12e-01 | |||||||||||
TTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAGCGAGCTTTATACCTC > NC_000913/2164995‑2165292 | ttAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCAcc < 2:313444/150‑1 (MQ=255) gTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCttt < 2:1427409/150‑1 (MQ=255) aGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATg > 2:544504/1‑150 (MQ=255) attattTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCATCTTTAGATGCTGttt > 1:1578453/1‑150 (MQ=255) attattTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCATCTAAAGGTGCTGttt < 2:696311/150‑1 (MQ=255) ttattTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGttt‑t < 2:958255/150‑1 (MQ=255) ttattTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACAATATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGttt‑t > 2:1049462/1‑150 (MQ=255) tattTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCTCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑Tc < 1:50736/150‑1 (MQ=255) attTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCg > 2:1561225/1‑150 (MQ=255) attTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCg < 1:537892/150‑1 (MQ=255) ttttGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGa < 2:188455/150‑1 (MQ=255) tttGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACGGCACCTTTAGATGCTGTTT‑TCGAt > 2:181472/1‑150 (MQ=255) tttGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGAt < 1:302144/150‑1 (MQ=255) tttGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGAt < 1:699333/150‑1 (MQ=255) tttGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATC‑GAAAACAGCATCTAAAGGTGCTGtttaccgat < 1:1634230/150‑7 (MQ=255) gTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATaca > 1:146984/1‑150 (MQ=255) gTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATaca > 1:786752/1‑150 (MQ=255) gTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATaca > 1:121131/1‑150 (MQ=255) tAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATAcaca > 2:1356568/1‑150 (MQ=255) ccGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAAtt > 2:1290591/1‑150 (MQ=255) ggAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTtc < 1:628974/150‑1 (MQ=255) ggAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTtc < 1:623209/150‑1 (MQ=255) agaTGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTtcaa < 1:548156/150‑1 (MQ=255) agaTGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTtcaa < 2:973606/150‑1 (MQ=255) ggCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTtcaatcaa > 1:1563914/1‑150 (MQ=255) cGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAgg < 2:1643098/150‑1 (MQ=255) cGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAgg > 2:950256/1‑150 (MQ=255) gTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGa > 2:1316107/1‑150 (MQ=255) ttCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAg < 1:2993/150‑1 (MQ=255) aGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCa < 2:148237/150‑1 (MQ=255) gACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCAt > 1:90055/1‑150 (MQ=255) ccAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATAGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTa > 2:41390/1‑150 (MQ=255) aGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAATTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATg > 2:1567667/1‑150 (MQ=255) gATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATgg > 1:431283/1‑150 (MQ=255) gATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATAAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATAAAGGAATCATTATga > 2:709682/1‑149 (MQ=255) cGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCtgg < 1:635857/150‑1 (MQ=255) gCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGTACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCtggtt < 2:706553/150‑1 (MQ=255) cATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTggttggtt < 1:729972/150‑1 (MQ=255) ttATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTg < 1:857936/150‑1 (MQ=255) tCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAAc < 2:1526804/150‑1 (MQ=255) tCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAAc < 1:465984/150‑1 (MQ=255) cACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCa > 2:949133/1‑150 (MQ=255) cACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCa < 1:1595094/150‑1 (MQ=255) aCGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAg < 1:1426337/150‑1 (MQ=255) cATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTaa > 1:611441/1‑150 (MQ=255) cATCGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTaa > 2:1342543/1‑150 (MQ=255) cAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAg > 1:705443/1‑150 (MQ=255) aGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGt < 1:994712/150‑1 (MQ=255) cAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGCAAGAGCAGTGa < 2:1563914/150‑1 (MQ=255) tGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATc < 1:1376177/150‑1 (MQ=255) aCATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAg < 1:1290591/150‑1 (MQ=255) aCATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAg < 1:500416/150‑1 (MQ=255) cATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGt > 1:505311/1‑150 (MQ=255) aaTTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATAGGTAAACAGCACCTTTAGATTCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGt < 1:1102604/149‑1 (MQ=255) aTTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGtt > 2:62441/1‑150 (MQ=255) tATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTct < 1:709682/150‑2 (MQ=255) tATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTcc < 2:181486/150‑1 (MQ=255) tctctcCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCgg < 1:1356568/150‑1 (MQ=255) tctcCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCTCCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGt > 1:757532/1‑124 (MQ=255) tctcCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCTCCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGt < 2:757532/124‑1 (MQ=255) tctcCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGtt > 1:178973/1‑150 (MQ=255) ctcCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGttt > 2:621500/1‑150 (MQ=255) ctcCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATACTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGttt > 2:125955/1‑150 (MQ=255) cGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTtgtg < 1:41390/150‑1 (MQ=255) gCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGc > 1:138169/1‑150 (MQ=255) cTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTaa > 1:331699/1‑150 (MQ=255) ggcaTCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCgg > 2:846848/1‑150 (MQ=255) cAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAAt > 2:1233277/1‑150 (MQ=255) taaaaTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATgg < 1:1316107/149‑1 (MQ=255) gAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATgg > 2:134071/1‑150 (MQ=255) aaaTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTg < 2:1631469/150‑1 (MQ=255) aTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTgag < 1:950256/150‑1 (MQ=255) gCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACt > 2:13002/1‑150 (MQ=255) gCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACt > 2:19205/1‑150 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATcc > 1:1482295/1‑150 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATcc < 1:1582614/150‑1 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATcc < 2:178973/150‑1 (MQ=255) aTACATTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATcc > 1:1482297/1‑150 (MQ=255) cTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCtac > 2:176284/1‑148 (MQ=255) gtatcgaaaaCAGCATCTAAAGGTGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAg > 2:606147/8‑150 (MQ=255) tatcgaaaaCAGCATCTAAAGGTGCTGTTTACCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAg > 2:441901/7‑150 (MQ=38) atcgaaaaCAGCATCTAAAGGTGCTGTTT‑ACGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAGCg > 2:672589/6‑150 (MQ=255) cGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAGCGa > 1:1390485/1‑150 (MQ=255) cGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAAACAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAGCGa > 1:1084550/1‑150 (MQ=255) aaaaCAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAGCGAGCt < 2:1486858/149‑1 (MQ=255) aaaCAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCTGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAGCGAGCtt < 1:521925/150‑1 (MQ=255) aaaCAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAGCGAGCtt > 1:283162/1‑150 (MQ=255) aaaCAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAGCGAGCtt < 1:1567667/150‑1 (MQ=255) aaaCAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGGTCCGGGTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCCCCAGCGAGCtt < 2:1070329/150‑1 (MQ=255) aaCAGCATCTAAAGGTGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAGCGAGCttt > 2:1281218/1‑150 (MQ=255) aaCAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAGCGAGCttt < 1:1233277/150‑1 (MQ=255) cAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAGCGAGCTTtat > 2:685915/1‑150 (MQ=255) cAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAGCGAGCTTtat > 1:1550702/1‑150 (MQ=255) gCACCTTTAGATGCTCTTT‑TCGATACACAATATCAATCAAGCAGACATTATGGCTGGTAGCTATGAACTCAGAATGAGCAGTCATAAACAGTTCCGGTTTGTGCTAAAAGCGGGCATTCGACAGACTATCCTCACCACCGAGCTTTATAc > 2:1441286/1‑150 (MQ=255) gCACCTTTAGATACTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAGCGAGCTTTATAc < 1:125955/150‑1 (MQ=255) cACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGGCATTATGGCGGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGATCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAGCGAGCTTTATAcc < 1:767097/150‑1 (MQ=255) ccTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAGCGAGCTTTATACATc > 2:1447513/1‑150 (MQ=255) | TTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTT‑TCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAGCGAGCTTTATACCTC > NC_000913/2164995‑2165292 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |