Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 568,268 IS1 (–) +9 bp intergenic (+21/‑39) renD → / → emrE DLP12 prophage; protein RenD/multidrug/betaine/choline efflux transporter EmrE

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 291401NA (NA)197 (1.060) 106/186 0.3 78.8% noncoding (1/768 nt) IS1 repeat region
?NC_000913 568268 = 48 (0.280)intergenic (+21/‑47) renD/emrE DLP12 prophage; protein RenD/multidrug/betaine/choline efflux transporter EmrE
* ? NC_000913 = 56827648 (0.290)196 (1.060) 101/184 0.4 78.6% intergenic (+29/‑39) renD/emrE DLP12 prophage; protein RenD/multidrug/betaine/choline efflux transporter EmrE
?NC_000913 = 1050545 NA (NA)noncoding (768/768 nt) IS1 repeat region

Only 100 of 205 total aligned reads displayed.

GTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/568178‑568276
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGT  <  NC_000913/1050545‑1050446
                                                                                                                                                                                                       
GTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAG                                                                                                     <  1:2766350/100‑1
 TGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGG                                                                                                    <  1:1804400/100‑1
     GCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAAT                                                                                                <  1:2147969/100‑1
           GTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAG                                                                                                     <  2:1434218/89‑1
           GTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAG                                                                                                     <  2:1614878/89‑1
             GCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAA                                                                                        >  1:193277/1‑100
              CCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTA                                                                                                  <  2:805160/89‑1
                GCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAAT                                                                                                >  2:1952702/1‑89
                 CGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTA                                                                                    >  1:1972832/1‑100
                 CGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATG                                                                                               <  2:1119031/89‑1
                 CGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATG                                                                                               <  2:615220/89‑1
                    TGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACT                                                                                            <  2:968822/89‑1
                     GAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTC                                                                                           >  2:2815970/1‑89
                      AAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGAT                                                                               <  1:185688/100‑1
                      AAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCC                                                                                          >  2:4679070/1‑89
                         CGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAAC                                                                                       >  2:146384/1‑89
                         CGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAAC                                                                                       >  2:3378206/1‑89
                         CGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCC                                                                                          <  1:360997/86‑1
                         CGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCC                                                                                          >  2:360997/1‑86
                           GGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTT                                                                                     >  2:2622087/1‑89
                             TATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTAT                                                                                   >  2:2462771/1‑89
                              ATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATT                                                                                  <  2:2595329/89‑1
                              ATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATT                                                                                  <  2:1861720/89‑1
                                TGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGA                                                                                >  2:47886/1‑89
                                 GAGGGTATATAAAAGAACATCAATGGGGACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATG                                                                    >  1:3235294/1‑100
                                 GAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGAT                                                                               <  2:632604/89‑1
                                  AGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGT                                                                   <  1:3151175/100‑1
                                  AGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGT                                                                   >  1:2646400/1‑100
                                   GGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAG                                                                             >  2:4556836/1‑89
                                   GGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAG                                                                             <  2:484226/89‑1
                                       ATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGA                                                              <  1:2530908/100‑1
                                       ATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTT                                                                         >  2:3244996/1‑89
                                        TATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTT                                                                        <  2:3672838/89‑1
                                          TAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTA                                                                      >  2:1921090/1‑89
                                          TAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTA                                                                      >  2:886884/1‑89
                                          TAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTA                                                                      <  2:2181316/89‑1
                                          TAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTA                                                                      >  2:2704168/1‑89
                                          TAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTA                                                                      >  2:3035337/1‑89
                                           AAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTAT                                                                     >  2:3694255/1‑89
                                           AAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTAT                                                                     <  2:3515334/89‑1
                                            AAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATG                                                         >  1:106013/1‑100
                                            AAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATG                                                                    <  2:2517379/89‑1
                                             AAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGT                                                                   <  2:294143/89‑1
                                              AGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCC                                                       <  1:3779701/100‑1
                                              AGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTT                                                                  <  2:1247465/89‑1
                                              AGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTT                                                                  >  2:3496162/1‑89
                                               GAACATGAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTC                                                                 <  2:128057/89‑1
                                               GAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCC                                                      <  1:1749754/100‑1
                                                AACATCAATGGGGACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCA                                                                <  2:4343832/89‑1
                                                AACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCG                                                     <  1:2192906/100‑1
                                                AACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCG                                                     >  1:687656/1‑100
                                                 ACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAG                                                               <  2:4394075/89‑1
                                                  CATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGA                                                              <  2:289862/89‑1
                                                  CATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGA                                                              >  2:3178372/1‑89
                                                   ATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATG                                                  <  1:4170516/100‑1
                                                    TCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATA                                                            >  2:2410392/1‑89
                                                     CAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAA                                                           >  2:3704453/1‑89
                                                     CAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAA                                                           >  2:2347369/1‑89
                                                     CAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAA                                                           >  2:1701440/1‑89
                                                      AATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACT                                               >  1:3896180/1‑100
                                                      AATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAT                                                          <  2:4655170/89‑1
                                                       ATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTT                                              <  1:2390058/100‑1
                                                       ATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATG                                                         <  2:4284159/89‑1
                                                       ATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATG                                                         >  2:1503946/1‑89
                                                       ATGGGAACACAATGATGAAACAGGTGAGTTGAATACAAAATGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATG                                                         <  2:3058090/89‑1
                                                         GGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTG                                            >  1:3507239/1‑100
                                                         GGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCC                                                       <  2:207984/89‑1
                                                           GAACACAATGATGAAACAGGTTAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCG                                                     <  2:728896/89‑1
                                                           GAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCG                                                     <  2:3902704/89‑1
                                                            AACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCA                                         <  1:768315/100‑1
                                                            AACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCA                                         <  1:1299323/100‑1
                                                            AACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCA                                         <  1:135632/100‑1
                                                            AACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGA                                                    <  2:284490/89‑1
                                                             ACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGAT                                                   >  2:2273557/1‑89
                                                               ACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGC                                      <  1:472959/100‑1
                                                                CAATGATGAAACAGGTGAGTTGAGTTCAAANTGTAGGTAANGANTCCNACTTATNGATAGTGTTTTATGTTCAGATAATGCCCGATGAC                                                >  2:276994/1‑89
                                                                 AATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACT                                               <  2:605492/89‑1
                                                                   TGATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTT                                             >  2:1596537/1‑89
                                                                    GATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTG                                            <  2:584273/89‑1
                                                                     ATGAAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGT                                           <  2:1626227/89‑1
                                                                      TGAAACATGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCA                               >  1:2987005/1‑100
                                                                        AAACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCAT                                        <  2:1398678/89‑1
                                                                         AACAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATG                                       >  2:4037725/1‑89
                                                                           CAGGTGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGAT                          >  1:3958516/1‑100
                                                                               TGAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTC                                 >  2:452244/1‑89
                                                                                GAGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCC                                <  2:2058808/89‑1
                                                                                 AGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAG                    <  1:1678233/100‑1
                                                                                 AGTTGAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAG                    >  1:949161/1‑100
                                                                                     GAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACG                >  1:547415/1‑100
                                                                                     GAGTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACG                <  1:2815970/100‑1
                                                                                       GTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGAC              <  1:1733634/100‑1
                                                                                       GTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGAC              <  1:1124255/100‑1
                                                                                       GTTCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGAC              >  1:401559/1‑100
                                                                                         TCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTT                       >  2:3779534/1‑89
                                                                                         TCAAACTGTAGGTAATGACTCCAACTTATTGATAGTGTATTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAG            >  1:4711127/1‑100
                                                                                               TGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAAC                 >  2:4122270/1‑89
                                                                                                GTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTC     >  1:1883979/1‑100
                                                                                                   GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGT  >  1:4410522/1‑100
                                                                                                   GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACA             >  2:1762939/1‑89
                                                                                                   GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATACCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGACCGACA             >  2:1143626/1‑89
                                                                                                                                                                                                       
GTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/568178‑568276
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGT  <  NC_000913/1050545‑1050446

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.