New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 837198 | 64 (0.570) | 8 (0.070) | 6/262 | NT | 11.3% | coding (848/1086 nt) | hcxB | hydroxycarboxylate dehydrogenase B |
? | NC_000913 | = 837221 | 65 (0.600) | coding (871/1086 nt) | hcxB | hydroxycarboxylate dehydrogenase B |
CGAACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/837046‑837198 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcggTCTGCGCGTTACAATCCGGCGCGCCGAAGAGTTCCGGGTTGATGATGATAGTGGTCATGCAGTTAAGAATGGCATCGGGACTGGTTTGTAACGTTTCCTGATGCGTCGTTTTACCGCCGGAAAGCGCCCCGCCAAGAATTTCACA < NC_000913/837221‑837077 CGAACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTT < 1:1665494/150‑1 GAACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTC > 2:142204/1‑150 ACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGG < 1:142204/150‑1 CATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGG < 1:256714/149‑1 CATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGG > 2:256714/1‑149 AGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGTCTGCG > 2:819558/1‑150 TACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGTCTGCGCGTT > 1:871020/1‑150 GAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGTCTGCGCGTTACAATCCGGCGCGCCGAAGAG < 2:871020/150‑1 AAATTCTTGGCGGGGCGCTTTCCGGCGGTAATACGACGCATCAGGAAAGGTTACAAACCATTCCCGATGCGATTCTTAACTTCATGACCAGTATCATCATCAACCCGGAACTCTTCGGTCTGCGCGTTACAATCCTGCGCGCCGAAGAGT < 2:1073497/150‑1 AAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGTCTGCGCGTTACAATCCGGCGCGCCGAAGAGT < 1:819558/150‑1 GCTTTCCGGCGGTAAAACGACGCAGCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCACCCCGGAACTCTGCGGTCTGCGCGTTACAATCCGGCGCGCCGAAGAGTTCCGGGTTGATGATGA < 1:1098006/150‑1 TCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGTCTGCGCGTTACAATCCGGCGCGCCGAAGAG > 1:716661/1‑129 TCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGTCTGCGCGTTACAATCCGGCGCGCCGAAGAG < 2:716661/129‑1 CTTCGGTCTGCGCGTTACAATCCGGCGCGCCGAAGAGTTCCGGGTTGATGATGATAGTGGTCATGCAGTTAAGAATGGCATCGGGACTGGTTTGTAACGTTTCCTGATGCGTCGTTTTACCGCCGGAAAGCGCCCCGCCAAGAATTTCAC > 2:1927184/1‑150 TTCGGTCTGCGCGTTACAATCCGGCGCGCCGAAGAGTTCCGGTTTGATGATGATAGTGGTCATGCAGTTAAGAATGGCATCGGGACTGGTTTGTAACGTTTCCTGATGCGTCGTTTTACCGCCGGAAAGCGCCCCGCCAAGAATTTCACA < 2:793909/150‑1 TTCGGTCTGCGCGTTACAATCCGGCGCGCCGAAGAGTTCCGGGTTGATGATGATAGTGGTCATGCAGTTAAGAATGGCATCGGGACTGGTTTGTAACGTTTCCTGATGCGTCGTTTTACCGCCGGAAAGCGCCCCGCCAAGAATTTCACA < 1:235964/150‑1 CGAACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/837046‑837198 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcggTCTGCGCGTTACAATCCGGCGCGCCGAAGAGTTCCGGGTTGATGATGATAGTGGTCATGCAGTTAAGAATGGCATCGGGACTGGTTTGTAACGTTTCCTGATGCGTCGTTTTACCGCCGGAAAGCGCCCCGCCAAGAATTTCACA < NC_000913/837221‑837077 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |