New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1691563	NA (NA)	4 (0.040)	4/252	NT	NA	intergenic (+203/+23)	ydgA/uidC	conserved protein YdgA/outer membrane porin family protein
	?	NC_000913	= 1691569	NA (NA)					intergenic (+209/+17)	ydgA/uidC	conserved protein YdgA/outer membrane porin family protein

TGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCTGAAACGCCGGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1691406‑1691563 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacgccggagaGAAAAATCTCCGGCGTTTCAGATTGTTGACAAAGTGCGCGTTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACAAAAACTCATAAATTCAAAGTGTTGCAGGAAAAGGTAGGCCTGATAAGCGTAGCGCATCAGGCA  <  NC_000913/1691569‑1691424                                                                                                                                                                                                                                                                                                                  TGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCTGAAAC                                                                                                                                                            >  1:79316/1‑150   AAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCTGAAACGC                                                                                                                                                          <  2:333661/150‑1        AAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCTGAAACGCCGGAG                                                                                                                                                     >  1:412680/1‑150                       TGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGTGCACTTTGTCAACAATCTGAAACGCCGGAGAGAAAAATCTCCGGC                                                                                                                                      <  2:290496/150‑1                                       TCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCTGAAACGCCGGAGAGAAAAATCTCCGGCGTTTCAGATTGTTGAC                                                                                                                      <  1:1631921/150‑1                                        CAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCTGAAACGCCGGAGAGAAAAATCTCCGGCGTTTCAGATTGTTGACA                                                                                                                     <  1:892060/150‑1                                                                     ATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCTGAAACGCCGGAGAGAAAAATCTCCGGCGTTTCAGATTGTTGACAAAGTGCGCGTTTTTTATGCCGGATGCGGC                                                                                        <  2:1898920/150‑1                                                                                                                                                    AACGCCGGAGAGAAAAATCTCCGGCGTTTCAGATTGTTGACAAAGTGCGCGTTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACAAAAACTCATAAATTCAAAGTGTTGCAGGAAAAGGTAGGCCTGATAAGCGTAGCGCA         <  1:1117650/150‑1                                                                                                                                                    AACGCCGGAGAGAAAAATCTCCGGCGTTTCAGATTGTTGACAAAGTGCGCGTTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACAAAAACTCATAAATTCAAAGTGTTGCAGGAAAAGGTAGGCCTGATAAGCGTAGCGCA         <  2:903413/150‑1                                                                                                                                                     ACGCCGGAGAGAAAAATCTCCGGCGTTTCAGATTGTTGACAAAGTGCGCGTTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACAAAAACTCATAAATTCAAAGTGTTGCAGGAAAAGGTAGG                           <  1:157659/131‑1                                                                                                                                                     ACGCCGGAGAGAAAAATCTCCGGCGTTTCAGATTGTTGACAAAGTGCGCGTTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACAAAAACTCATAAATTCAAAGTGTTGCAGGAAAAGGTAGG                           >  2:157659/1‑131                                                                                                                                                      CGCCGGAGAGAAAAATCTCCGGCGTTTCAGATTGTTGACAAAGTGCGCGTTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACAAAAACTCATAAATTCAAAGTGTTGCAGGAAAAGGTAGGCCTGATAAGCGTAGCGCATC       >  1:1412513/1‑150                                                                                                                                                       GCCGGAGAGAAAAATCTCCGGCGTTTCAGATTGTTGACAAAGTGCGCGTTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACAAAAACTCATAAATTCAAAGTGTTGCAGGAAAAGGTAGGCCTGATAAGCGTAGCGCATCA      <  1:463248/150‑1                                                                                                                                                       GCCGGAGAGAAAAATCTCCGGCGTTTCAGATTGTTGACAAAGTGCGCGTTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACAAAAACTCATAAATTCAAAGTGTTGCAGGAAAAGGTAGGCCTGATAAGCGTAGCGCATCA      <  1:1509998/150‑1                                                                                                                                                        CCGGAGAGAAAAATCTCCGGCGTTTCAGATTGTTGACAAAGTGCGCGTTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACAAAAACTCATAAATTCAAAGTGTTGCAGGAAAAGGTAGGCCTGA                      <  1:934148/133‑1                                                                                                                                                        CCGGAGAGAAAAATCTCCGGCGTTTCAGATTGTTGACAAAGTGCGCGTTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACAAAAACTCATAAATTCAAAGTGTTGCAGGAAAAGGTAGGCCTGA                      >  2:934148/1‑133                                                                                                                                                           GAGAGAAAAATCTCCGGCGTTTCAGATTGTTGACAAAGTGCGCGTTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACAAAAACTCATAAATTCAAAGTGTTGCAGGAAAAGGTAGGCCTGATAAGCGTAGCGCATCAGGCA  <  2:1741270/150‑1                                                                                                                                                                                                                                                                                                                  TGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCTGAAACGCCGGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1691406‑1691563 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacgccggagaGAAAAATCTCCGGCGTTTCAGATTGTTGACAAAGTGCGCGTTTTTTATGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACAAAAACTCATAAATTCAAAGTGTTGCAGGAAAAGGTAGGCCTGATAAGCGTAGCGCATCAGGCA  <  NC_000913/1691569‑1691424

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.