| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1999548 | 89 (0.790) | 5 (0.050) | 4/258 | NT | 5.7% | intergenic (‑68/+37) | dcyD/tcyJ | D‑cysteine desulfhydrase/cystine ABC transporter periplasmic binding protein |
| ? | NC_000913 | = 1999563 | 82 (0.770) | intergenic (‑83/+22) | dcyD/tcyJ | D‑cysteine desulfhydrase/cystine ABC transporter periplasmic binding protein | |||||
ATCAGAAAAGCGCGGCAGATATTCGAGCGGCGTTGGCGCGCCGATAAACTCCAGCCGTGGAAAACGGGTTAAATTATGCAGTGGCATAACAGCCTCCGATGTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAAAAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1999394‑1999548‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaaaggGCGCTTTCACTAGCGCCTTTTTTATTTACGCGTTTTCAGCGTGCATAATAAGAAAATCACAACAACACACATCGGAGGCTGTTATGCCACTGCATAATTTAACCCGTTTTCCACGGCTGGAGTTTATCGGCGCGCCAACGCCGCTCGAA < NC_000913/1999563‑1999415 ATCAGAAAAGCGCGGCAGATATTCGAGCGGCGTTGGCGCGCCGATAAACTCCAGCCGTGGAAAACGGGTTAAATTATGCAGTGGCATAACAGCCTCCGATGTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAA > 1:1469460/1‑150ATCAGAAAAGCGCGGCAGATATTCGAGCGGCGTTGGCGCGCCGATAAACTCCAGCCGTGGAAAACGGGTTAAATTATGCAGTGGCATAACAGCCTCCGATGTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAA > 1:1996567/1‑150ATCAGAAAAGCGCGGCAGATATTCGAGCGGCGTTGGCGCGCCGATAAACTCCAGCCGTGGAAAACGGGTTAAATTATGCAGTGGCATAACAGCCTCCGATGTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAA < 2:660730/150‑1 CAGAAAAGCGCGGCAGATATTCGAGCGGCGTTGGCGCGCCGATAAACTCCAGCCGTGGAAAACGGGTTAAATTATGCAGTGGCATAACAGCCTCCGATGTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAAAA > 1:1158461/1‑150 AGAAAAGCGCGGCAGATATTCGAGCGGCGTTGGCGCGCCGATAAACTCCAGCCGTGGAAAACGGGTTAAATTATGCAGTGGCATAACAGCCTCCGATGTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAAAAA > 2:428831/1‑150 GAAAAGCGCGGCAGATATTCGAGCGGCGTTGGCGCGCCGATAAACTCCAGCCGTGGAAAACGGGTTAAATTATGCAGTGGCATAACAGCCTCCGATGTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAAAAAG < 2:1998328/150‑1 GTTGGCGCGCCGATAAACTCCAGCCGTGGAAAACGGGTTAAATTATGCAGTGGCATAACAGCCTCCGATGTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAAAAAGGGCGCTTTCACTAGCGCCTTTTTTATT < 1:397474/150‑1 GTTGGCGCGCCGATAAACTCCAGCCGTGGAAAACGGGTTAAATTATGCAGTGGCATAACAGCCTCCGATGTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAAAAAGGGCGCTTTCACTAGCGCCTTTTTTATT < 2:501973/150‑1 GCGCGCCGATAAACTCCAGGCGTGGAAAACGGGTTAAATTATGCAGTGGCATAACAGCCTCCGATGTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAATCGCGTAAATAAAAAAGGGCGCTTTCACTAGCGCCTTTTTTATTTACG < 2:183845/150‑1 CGCGCCGATAAACTCCAGCCGTGGAAAACGGGTTAAATTATGCAGTGGCATAACAGCCTCCGATGTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAAAAAGGGCGCTTTCACTAGCGCCTTTTTTATTTACGC < 2:1225645/150‑1 ACTCCAGCCGTGGAAAACGGGTTAAATTATGCAGTGGCATAACAGCCTCCGATGTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAAAAAGGGCGCTTTCACTAGCGCCTTTTTTATTTACGCGTTTTCAGCGT < 2:1404488/150‑1 AAAAAGGGCGCTTTCACTAGCGCCTTTTTTATTTACGCGTTTTCAGCGTGCATAATAAGAAAATCACAACAACACACATCGGAGGCTGTTATGACACTGCATAATTTAACCCGTTTTCCACGGCTGGAGTTTATCGGCGCGCCAACGCCG > 2:857381/1‑150 GGCGCTTTCACTAGCGCCTTTTTTATTTACGCGTTTTCAGCGTGCATAATAAGAAAATCACAACAACACACATCGGAGGCTGTTATGCCACTGCATAATTTAACCCGTTTTCCACGGCTGGAGTTTATCGGCGCGCCAACGCCGCTCGAA > 1:1048744/1‑150 GGCGCTTTCACTAGCGCCTTTTTTATTTACGCGTTTTCAGCGTGCATAATAAGAAAATCACAACAACACACATCGGAGGCTGTTATGCCACTGCATAATTTAACCCGTTTTCCACGGCTGGAGTTTATCGGCGCGCCAACGCCGCTCGAA < 2:1756000/150‑1 ATCAGAAAAGCGCGGCAGATATTCGAGCGGCGTTGGCGCGCCGATAAACTCCAGCCGTGGAAAACGGGTTAAATTATGCAGTGGCATAACAGCCTCCGATGTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAAAAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1999394‑1999548‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaaaggGCGCTTTCACTAGCGCCTTTTTTATTTACGCGTTTTCAGCGTGCATAATAAGAAAATCACAACAACACACATCGGAGGCTGTTATGCCACTGCATAATTTAACCCGTTTTCCACGGCTGGAGTTTATCGGCGCGCCAACGCCGCTCGAA < NC_000913/1999563‑1999415 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |