New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3227830	82 (0.730)	5 (0.050)	5/258	NT	5.8%	coding (30/1071 nt)	ygjJ	protein YgjJ
	?	NC_000913	= 3227835	84 (0.790)					coding (35/1071 nt)	ygjJ	protein YgjJ

TAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3227674‑3227830 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagagcaAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGGGAAAATGCCT  <  NC_000913/3227835‑3227689                                                                                                                                                                                                                                                                                                                  TAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATG                                                                                                                                                            >  2:984684/1‑150  AATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGC                                                                                                                                                           <  2:398721/150‑1   ATAAAAAATTATCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCA                                                                                                                                                          <  2:1998261/150‑1   ATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCA                                                                                                                                                          >  2:1314120/1‑150    TAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAG                                                                                                                                                         <  1:1980599/150‑1      AAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAG                                                                                                                                                       >  2:439037/1‑150                         CCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCAAGTAATGCTCTGCATGG                                                                                                                                    <  1:403044/150‑1                                                GAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGT                                                                                                             <  1:1170905/150‑1                                                                                  CAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAA                                                                                             >  1:1140614/1‑132                                                                                  CAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAA                                                                                             <  2:1140614/132‑1                                                                                                                                          TCACTGCACCATGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAG                   >  1:439037/1‑150                                                                                                                                                      GCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGGGAAAA       <  1:1830307/150‑1                                                                                                                                                         GAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGGGAAAATGC    >  2:1729378/1‑150                                                                                                                                                          AGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGGGAAAATGCC   <  1:1478013/150‑1                                                                                                                                                          AGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGGGAAAATGCC   <  2:246130/150‑1                                                                                                                                                           GCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGGGAAAATGCCT  >  2:510775/1‑150                                                                                                                                                                                                                                                                                                                  TAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3227674‑3227830 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagagcaAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGGGAAAATGCCT  <  NC_000913/3227835‑3227689

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.