New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3233036 =	92 (0.810)	5 (0.050)	5/264	NT	5.1%	coding (1372/2019 nt)	fadH	2,4‑dienoyl‑CoA reductase
	?	NC_000913	3233100 =	96 (0.880)					coding (1436/2019 nt)	fadH	2,4‑dienoyl‑CoA reductase

CAAAACCAATCCCGCCACAACCGATGATGGCAACTTTGTTGCCAACCGGCGCTTTGTCGCGCAGTACATCGAGATAACTCAATACCTTCGGATGATCGATCCCGTCGATGGGCGGAGTGCGCGGCACGATCCCACTGGCGAGGATCGTTTCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3233189‑3233036 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcatcCGAAGGTATTGAGTTATCTCGATGTACTGCGCGACAAAGCGCCGGTTGGCAACAAAGTTGCCATCATCGGTTGTGGCGGGATTGGTTTTGATACGGCGATGTATTTAAGTCAGCCGGGCGAATCCACCAGCCAGAATATCGCCGGGTT  >  NC_000913/3233100‑3233247                                                                                                                                                                                                                                                                                                                CAAAACCAATCCCGCCACAACCGATGATGGCAACTTTGTTGCCAACCGGCGCTTTGTCGCGCAGTACATCGAGATAACTCAATACCTTCGGATGATCGATCCCGTCGATGGGCGGAGTGCGCGGCACGATCCCACTGGCGAGGATCGTTT                                                                                                                                                          <  1:1908201/150‑1  AAAACCAATCCCGCCACAACCGATGATGGCAACTTTGGTGCCAACCGGCGCTTTGTCGCGCAGTACATCGAGATAACTCAATACCTTCGGATGATCGATCCCGTCGATTGGCGGAGTGCGCGGCACGATCCCACTGGCGAGGATCGTTTC                                                                                                                                                         <  1:888059/150‑1                                                                      CGAGATAACTCAATACCTTCGGATGATCGATCCCGTCGATGGGCGGAGTGCGCGGCACGATCCCACTGGCGAGGATCGTTTCATCCGAAGGTATTGAGTTATCTCGATGTACTGCGCGACAAAGCGCCGGTTGGCAACAAAGTTGCCATC                                                                                     >  2:1412730/1‑150                                                                                         CGGATGATCGATCCCGTCGATGGGCGGAGTGCGCGGCACGATCCCACTGGCGAGGATCGTTTCATCCGAAGGTATTGAGTTATCTCGATGTACTGCGCGACAAAGCGCCGGTTGGCAACAAAGTTGCCATCATCGGTTGTGGCGGGAGTG                                                                  >  2:574796/1‑150                                                                                          GGATGATCGATCCCGTCGATGGGCGGAGTGCGCGGCACGATCCCACTGGTGAGGATCGTTTCATCCGAAGGTATTGAGTTATCTCGATGTACTGCGCGACAAAGCGCCGGTTGGCAACAAAGTTGCCATCATCGGTTGTGGCGGGATTGG                                                                 >  1:733422/1‑150                                                                                           GATGATCGATCCCGTCGATGGGCGGAGTGCGCGGCACGATCCCACTGGCGAGGATCGTTTCATCCGAAGGTATTGAGTTATCTCGATGTACTGCGCGACAAAGCGCCGGTTGGCAACAAAGTTGCCATCATCGGTTGTGGCGGGATTGGT                                                                >  1:1216639/1‑150                                                                                               ATCGATCCCGTCGATGGGCGGAGTGCGCGGCACGATCCCACTGGCGAGGATCG‑ATCATCCGAAGGTATTGAGTTATCTCGATGTACTGCGCGACAAAGCGCCGGTTGGCAACAAAGTTGCCATCATCGGTTGTGGCGGGATTGGTTTTGA                                                           >  1:75347/1‑150                                                                                                                                                      TCATCCGAAGGTATTGAGTTATCTCGATGTACTGCGCGACAAAGCGCCGGTTGGCAACAAAGTTGCCATCATCGGTTGTGGCGGGATTGGTTTTGATACGGCGATGTATTTAATTCAGCCGGGCGAATCCACCAGCCAGAATATCGCCGG     <  2:1914084/150‑1                                                                                                                                                      TCATCCGAAGGTATTGAGTTATCTCGATGTACTGCGCGACAAAGCGCCGGTTGGCAACAAAGTTGCCATCATCGGTTGTGGCGGGATTGGTTTTGATACGGCGATGTATTTAAGTCAGCCGGGCGAATCCACCAGCCAGAATATCGCCGG     <  2:784651/150‑1                                                                                                                                                        ATCCGAAGGTATTGAGTTATCTCGATGTACTGCGCGACAAAGCGCCGGTTGGCAACAAAGTTGCCATCATCGGTTGTGGCGGGATTGGTTTTGATACGGCGATGTATTTAAGTCAGCCGGGCGAATCCACCAGCCAGAATATCGCCGGGT   <  2:1216639/150‑1                                                                                                                                                         TCCGAAGGTATTGAGTTATCTCGATGTACTGCGCGACAAAGCGCCGGTTGGCAACAAAGTTGCCATCATCGGTTGTGGCGGGATTGGTTTTGATACGGCGATGTATTTAAGTCAGCCGGGCGAATCCACCAGCCAGAATATCGCCGGGTT  <  1:202382/150‑1                                                                                                                                                         TCCGAAGGTATTGAGTTATCTCGATGTACTGCGCGACAAAGCGCCGGTTGGCAACAAAGTTGCCATCATCGGTTGTGGCGGGATTGGTTTTGATACGGCGATGTATTTAAGTCAGCCGGGCGAATCCACCAGCCAGAATATCGCCGGGTT  >  2:1407320/1‑150                                                                                                                                                         TCCGAAGGTATTGAGTTATCTCGATGTACTGCGCGACAAAGCGCCGGTTGGCAACAAAGTTGCCATCATCGGTTGTGGCGGGATTGGTTTTGATACGGCGATGT                                                >  1:450374/1‑104                                                                                                                                                         TCCGAAGGTATTGAGTTATCTCGATGTACTGCGCGACAAAGCGCCGGTTGGCAACAAAGTTGCCATCATCGGTTGTGGCGGGATTGGTTTTGATACGGCGATGT                                                <  2:450374/104‑1                                                                                                                                                                                                                                                                                                                CAAAACCAATCCCGCCACAACCGATGATGGCAACTTTGTTGCCAACCGGCGCTTTGTCGCGCAGTACATCGAGATAACTCAATACCTTCGGATGATCGATCCCGTCGATGGGCGGAGTGCGCGGCACGATCCCACTGGCGAGGATCGTTTCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3233189‑3233036 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcatcCGAAGGTATTGAGTTATCTCGATGTACTGCGCGACAAAGCGCCGGTTGGCAACAAAGTTGCCATCATCGGTTGTGGCGGGATTGGTTTTGATACGGCGATGTATTTAAGTCAGCCGGGCGAATCCACCAGCCAGAATATCGCCGGGTT  >  NC_000913/3233100‑3233247

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.