| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4013089 | 226 (2.000) | 13 (0.120) | 10/262 | NT | 5.7% | coding (37/2262 nt) | metE | cobalamin‑independent homocysteine transmethylase |
| ? | NC_000913 | = 4013100 | 216 (2.000) | coding (48/2262 nt) | metE | cobalamin‑independent homocysteine transmethylase | |||||
TTGGCTGCGTTTCTCCACCCCGGTCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4012935‑4013089‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcgcgACGCAGGCCAACGCGAGGGAAACCGAGGGTGTGATTCAATATTGTCATTTTTTCTTCCTCTAATTATATGTAAATCCTATGGATTTTGAATTTAGGGAAGGCGGCAAGTTTATTCATCCCCGGGAGCTTACTGAAGTAAGTGACCGGGG < NC_000913/4013100‑4012952 TTGGCTGCGTTTCTCCACCCCGGTCACTTACTTCAGTAAGCTCCCGGGGCTGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCC < 2:1033107/150‑1TTGGCTGCGTTTCTCCACCCCGGTCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCC < 1:443561/150‑1TTGGCTGCGTTTCTCCACCCCGGTCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCC < 1:27372/150‑1TTGGCTGCGTTTCTCCACCCCGGTCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCC < 2:62843/150‑1 TGGCTGCGTTTCTCCACCCCGGTCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCT < 2:746649/150‑1 GGCTGCGTTTCTCCACCCCGGTCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTC < 1:452763/150‑1 GGCTGCGTTTCTCCACCCCGGTCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTC < 2:1019614/150‑1 GCTGCGTTTCTCCACCCCGGTCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCt < 2:926646/150‑2 CTGCGTTTCTCCACCCCGGTCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGC > 2:527780/1‑150 CTGCGTTTCTCCACCCCGGTCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGC > 1:999769/1‑150 CTGCGTTTCTCCACCCCGGTCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGC > 1:119078/1‑150 TGCGTTTCTCCACCCCGGTCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGCG < 2:545145/150‑1 TGCGTTTCTCCACCCCGGTCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGCG < 2:686446/150‑1 TGCGTTTCTCCACCCCGGTCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGCG < 1:404561/150‑1 TGCGTTTCTCCACCCCGGTCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGCG > 1:1090389/1‑150 TGCGTTTCTCCACCCCGGTCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGCG < 1:466722/150‑1 GTCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGCGACGCAGGCCAACGCGAG < 1:1070713/150‑1 TCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGCGACGCAGGCCAACGCGAGG < 2:1587446/150‑1 TCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGCGACGCAGGCCAACGCGAGG < 2:1594366/150‑1 TCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGCGACGCAGGCCAACGCGAGG < 2:1968469/150‑1 CACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGCGACGCAGGCCAACGCGAGGG < 1:1052670/150‑1 CACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGCGACGCAGGCCAACGCGAGGG < 1:1243780/150‑1 ACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGCGACGCAGGCCAACGCGAGGGA < 1:1669056/150‑1 CTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGCGACGCAGGCCAACGCGAGGGAA < 1:1408654/150‑1 TTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGCGACGCAGGCCAACGCGAGGGAAA < 2:1139561/150‑1 ACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGCGACGCAGGCCAACGCGAGGGAAACC < 1:1583216/150‑1 GCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGCGACGCAGGCCAACGCGAGGGAAACCGAGGGTGTGA < 1:1954857/150‑1 CTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGCGACGCAGGCCAACGCGAGGGAAACCGAGGGTGTGAT < 2:1599981/150‑1 CGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGCGACGCAGGCCAACGCGAGGGAAACCGAGGGTGTGATTCAATATTGTCATTTTTTCTTCC < 2:1567405/150‑1 CTCGCGACGCAGGCCAACGCGAGGGAAACCGAGGGTGTGATTCAATATTGTCATTTTTTCTTCCTCTAATTATATGTAAATCCTATGGATTTTGAATTTAGGGAAGGCGGCAAGTTTATTCATCCCCGGGAGCTTACTGAAGTAAGTGAC > 2:1865981/1‑150 CGCGACGCAGGCCAACGCGAGGGAAACCGAGGGTGTGATTCAATATTGTCATTTTTTCTTCCTCTAATTATATGTAAATCCTATGGATTTTGAATTTAGGGAAGGCGGCAAGTTTATTCATCCCCGGGAGCTTGCTGAAGTAAGTGACCG > 2:968261/1‑150 CGCGACGCAGGCCAACGCGAGGGAAACCGAGGGTGTGATTCAATATTGTCATTTTTTCTTCCTCTAATTATATGTAAATCCTATGGATTTTGAATTTAGGGAAGGCGGCAAGTTTATTCATCCCCGGGAGCTTACTGAAGTAAGTGACCG > 1:138931/1‑150 CGCGACGCAGGCCAACGCGAGGGAAACCGAGGGTGTGATTCAATATTGTCATTTTTTCTTCCTCTAATTATATGTAAATCCTATGGATTTTGAATTTAGGGAAGGCGGCAAGTTTATTCATCCCCGGGAGCTTACTGAAGTAAGTGACCG > 2:1645413/1‑150 CGCGACGCAGGCCAACGCGAGGGAAACCGAGGGTGTGATTCAATATTGTCATTTTTTCTTCCTCTAATTATATGTAAATCCTATGGATTTTGAATTTAGGGAAGGCGGCAAGTTTATTCATCCCCGGGAGCTTACTGAAGTAAGTGACCG > 2:1130388/1‑150 CGCGACGCAGGACAACGCGAGGGAAACCTAGGGTGTGATTCAATATTGTCATTTTTTCTTCCTCTAATTATATGTAAATCCTATGGATTTTGAATTTAGGGAAGGCGGCAAGTTTATTCATCCCCGGGAGCTTACTGAAGTAAGTGACCG > 2:1652310/1‑150 GCGACGCAGGCCAACGCGAGGGAAACCGAGGGTGTGATTCAATATTGTCATTTTTTCTTCCTCTAATTATATGTAAATCCTATGGATTTTGAATTTAGGGAAGGCGGCAAGTTTATTCATCCCCGGTCACTTACTTCAGTAAGctcccgg < 1:1368889/150‑8 GCGACGCAGGCCAACGCGAGGGAAACCGAGGGTGTGATTCAATATTGTCATTTTTTCTTCCTCTAATTATATGTAAATCCTATGGATTTTGAATTTAGGGAAGGCGGCAAGTTTATTCATCCCCGGGAGCTTACTGAAGTAAGTGACCGG > 1:1496103/1‑150 CGACGCAGGCCAACGCGAGGGAAACCGAGGGTGTGATTCAATATTGTCATTTTTTCTTCCTCTAATTATATGTAAATCCTATGGATTTTGAATTTAGGGAAGGCGGCAAGTTTATTCATCCCCGGGAGCTTACTGAAGTAAGTGACCGGG > 2:29963/1‑150 GACGCAGGCCAACGCGAGGGAAACCGAGGGTGTGATTCAATATTGTCATTTTTTCTTCCTCTAATTATATGTAAATCCTATGGATTTTGAATTTAGGGAAGGCGGCAAGTTTATTCATCCCCGGGAGCTTACTGAAGTAAGTGACCGGGG > 2:1624171/1‑150 TTGGCTGCGTTTCTCCACCCCGGTCACTTACTTCAGTAAGCTCCCGGGGATGAATAAACTTGCCGCCTTCCCTAAATTCAAAATCCATAGGATTTACATATAATTAGAGGAAGAAAAAATGACAATATTGAATCACACCCTCGGTTTCCCTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4012935‑4013089‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcgcgACGCAGGCCAACGCGAGGGAAACCGAGGGTGTGATTCAATATTGTCATTTTTTCTTCCTCTAATTATATGTAAATCCTATGGATTTTGAATTTAGGGAAGGCGGCAAGTTTATTCATCCCCGGGAGCTTACTGAAGTAAGTGACCGGGG < NC_000913/4013100‑4012952 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |