| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4289212 | 211 (1.870) | 16 (0.150) | 12/260 | NT | 7.7% | intergenic (+12/‑33) | nrfA/nrfB | cytochrome c552 nitrite reductase/periplasmic nitrite reductase penta‑heme c‑type cytochrome |
| ? | NC_000913 | = 4289220 | 181 (1.690) | intergenic (+20/‑25) | nrfA/nrfB | cytochrome c552 nitrite reductase/periplasmic nitrite reductase penta‑heme c‑type cytochrome | |||||
CCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4289057‑4289212‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttccgccCCTTGCGAGGCGGAACGGGGTTATTGGCTTAACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCTTT < NC_000913/4289220‑4289072 CCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATGAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGT > 1:1472562/1‑150 CGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTT < 2:1425614/150‑1 GGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTC < 1:498458/150‑1 TATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGC > 1:743416/1‑150 ATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATACCCCCGTTCCGCC < 1:1595699/150‑1 ATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCC > 2:1135046/1‑150 TCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCCCT < 2:651847/150‑1 GAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCCCTTGCGAGGCGGA > 2:892035/1‑150 GAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCG < 1:432226/134‑1 GAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCG > 2:432226/1‑134 AAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCCCTTGCGAGGCGGAAC < 1:1069751/150‑1 GCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCCCTTGCGAGGCGGAACGG < 1:892035/150‑1 CCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCCCTTGCGAGGCGGAACGGG < 2:1418457/150‑1 CCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCCCTTGCGAGGCGGAACGGGG < 1:453492/150‑1 CCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCCCTTGCGAGGCGGAACGGGG < 1:1239101/150‑1 CCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCCCTTGCGAGGCGGAACGGGG < 1:1008216/150‑1 CAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCCCTTGCGAGGCGGAACGGGGT < 1:1434881/150‑1 CAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCCCTTGCGAGGCGGAACGGGGT < 1:917782/150‑1 AATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACATAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCCCTTGCGAGGCGGAACGGGGTTATTG < 2:1186141/126‑1 AATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACATAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCCCTTGCGAGGCGGAACGGGGTTATTG > 1:1186141/1‑126 CAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCCCTTGCGAGGCGGAACGGGG > 2:553456/1‑93 CAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCCCTTGCGAGGCGGAACGGGG < 1:553456/93‑1 GCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCCCTTGCGAGGCGGAACGGGGTTATTGGCTTAACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTG > 1:1226963/1‑150 GGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCCCTTGCGAGGCGGAACGGGGTTATTGGCTTAACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGAT < 2:1226963/150‑1 ATAACCCCGTTCCGCCCCTTGCGAGGCGGAACGGGGTTATTGGCTTAACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTG > 1:540628/1‑150 TCCGCCCCTTGCGAGGCGGAACGGGGTTATTGGCTTAACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTC > 2:1287816/1‑150 TCCGCCCCTTGCGAGGCGGAACGGGGTTATTGGCTTAACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTC < 1:1765341/150‑1 CCGCCCCTTGCGAGGCGGAACGGGGTTATTGGCTTAACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGG > 2:1356969/1‑144 CCGCCCCTTGCGAGGCGGAACGGGGTTATTGGCTTAACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGG < 1:1356969/144‑1 GCCCCTTGCGAGGCGGAACGGGGTTATTGGCTTAACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCT > 1:1730450/1‑150 CCCTTGCGAGGCGGAACGGGGTTATTGGCTTAACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCgat < 1:923389/150‑4 CCCTTGCGAGGCGGAACGGGGTTATTGGCTTAACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCTTT < 1:452921/150‑1 CCCTTGCGAGGCGGAACGGGGTTATTGGCTTAACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCTTT < 1:332172/150‑1 CCCTTGCGAGGCGGAACGGGGTTATTGGCTTAACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCTTT > 2:245319/1‑150 CCCTTGCGAGGCGGAACGGGGTTATTGGCTTAACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCTTT < 1:1391159/150‑1 CCCTTGCGAGGCGGAACGGGGTTATTGGCTTAACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCTTT < 2:930212/150‑1 CCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4289057‑4289212‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttccgccCCTTGCGAGGCGGAACGGGGTTATTGGCTTAACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCTTT < NC_000913/4289220‑4289072 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |