New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 227009671 (0.630)6 (0.060) 6/254 NT 7.3% coding (118/567 nt) mepS peptidoglycan DD‑endopeptidase/peptidoglycan LD‑carboxypeptidase
?NC_000913 = 2270134 86 (0.820)coding (156/567 nt) mepS peptidoglycan DD‑endopeptidase/peptidoglycan LD‑carboxypeptidase

CGTTAAGGACTTCAAGGGAAAACAAACAACATGGTCAAATCTCAACCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGAAAGGCGTACGTTATCGTCTGGGCGGCAGCACT  >  NC_000913/2269949‑2270242
                                                                                                                                                   |                                                                                                                                                  
cGTTAAGGACTTCAAGGGAAAACAAACAACATGGTCAAATCTCAACCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGaca                                                                                                                                                  >  1:457540/1‑150 (MQ=255)
    aaGGACTTCAAGGGAAAACAAACAACATGGTCAAATCTCAACCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTg                                                                                                                                              >  2:892791/1‑150 (MQ=255)
    aaGGACTTCAAGGGAAAACAAACAACATGGTCAAATCTCAACCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTg                                                                                                                                              <  2:1369310/150‑1 (MQ=255)
    aaGGACTTCAAGGGAAAACAAACAACATGGTCAAATCTCAACCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTg                                                                                                                                              >  2:513137/1‑150 (MQ=255)
    aaGGACTTCAAGGGAAAACAAACAACATGGTCAAATCTCAACCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTg                                                                                                                                              >  1:1808860/1‑150 (MQ=255)
           tCAAGGGAAAACAAACAACATGGTCAAATCTCAACCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTggg                                                                                                                                       >  2:829467/1‑150 (MQ=255)
                  aaaaCAAACAACATGGTCAAATCTCAACCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGGTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGaa                                                                                                                                <  2:813329/150‑1 (MQ=255)
                  aaaaCAAACAACATGGTCAAATCTCAACCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGaa                                                                                                                                >  1:244752/1‑150 (MQ=255)
                  aaaaCAAACAACATGGTCAAATCTCAACCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGaa                                                                                                                                >  2:1989294/1‑150 (MQ=255)
                    aacaaacaACATGGTCAAATCTCAACCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAAc                                                                                                                              <  2:1100879/150‑1 (MQ=255)
                    aacaaacaACATGGTCAAATCTCAACCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAAc                                                                                                                              <  1:1681989/150‑1 (MQ=255)
                     acaaacaaCATGGTCAAATCTCAACCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAAca                                                                                                                             <  1:824279/150‑1 (MQ=255)
                      caaacaaCATGGTCAAATCTCAACCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGAagcttgcagtgatgatgtttcact                                                                                                                            >  2:662726‑M1/1‑126 (MQ=255)
                      caaacaaCATGGTCAAATCTCAACCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAAcat                                                                                                                            >  1:1030883/1‑150 (MQ=255)
                                ggTCAAATCTCAACCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTCCAGTAGCGGTTCAGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCa                                                                                                                  >  1:1852218/1‑150 (MQ=255)
                                        ctcAACCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTtctc                                                                                                          >  1:1989294‑M2/1‑146 (MQ=255)
                                            aCCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTtctcagga                                                                                                      >  1:473371‑M2/1‑142 (MQ=255)
                                             ccGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGAagcttgcagtgatgatgtttcactacccactgcacgtgtctcaggat                                                                                                     <  1:662726‑M1/150‑48 (MQ=255)
                                             ccGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTtctcaggat                                                                                                     >  1:829467‑M2/1‑141 (MQ=255)
                                              cGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGAagcttgcagtgatgatgtttcactacccactgcacgtgtctcaggatg                                                                                                    <  2:1895265‑M1/150‑49 (MQ=255)
                                              cGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTtctcaggatg                                                                                                    <  1:296498‑M2/150‑11 (MQ=255)
                                                   ttGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGAagcttgcagtgatgatgtttcactacccactgcacgtgtctcaggatgcatat                                                                                               <  2:1031592‑M1/150‑54 (MQ=255)
                                                   ttGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTtctcagga                                                                                                      <  1:712504‑M2/143‑9 (MQ=255)
                                                   ttGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTtctcagga                                                                                                      >  2:712504‑M2/1‑135 (MQ=255)
                                                      agaTATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGaa                                                                                            <  2:244752/150‑1 (MQ=255)
                                                         tatatCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAAc                                                                                         >  1:1346192/1‑150 (MQ=255)
                                                         tatatCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAAc                                                                                         <  2:87263/150‑1 (MQ=255)
                                                          atatCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAAcc                                                                                        <  2:1488211/150‑1 (MQ=255)
                                                             tCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTgg                                                                                     >  2:157163/1‑150 (MQ=255)
                                                              cTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGAcacgtgcagtgatgatgtttcactacccactgcacgt                                                                                                               >  2:1184115‑M1/1‑86 (MQ=255)
                                                              cTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGAcacgtgcagtgatgatgtttcactacccactgcacgt                                                                                                               <  1:1184115‑M1/123‑38 (MQ=255)
                                                              cTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGt                                                                                    >  1:752174/1‑150 (MQ=255)
                                                                 gcgcGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCg                                                                                 >  1:327617/1‑150 (MQ=255)
                                                                  cgcgGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGt                                                                                <  2:544248/150‑1 (MQ=255)
                                                                   gcgGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTa                                                                               <  1:283832/150‑1 (MQ=255)
                                                                    cgGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTaa                                                                              <  2:101278/150‑1 (MQ=255)
                                                                       gATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGt                                                                           <  1:157163/150‑1 (MQ=255)
                                                                        aTTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTc                                                                          <  2:828986/150‑1 (MQ=255)
                                                                         ttCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCg                                                                         <  1:1484025/150‑1 (MQ=255)
                                                                              gcgATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTa                                                                    <  1:252917/150‑1 (MQ=255)
                                                                                   tGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATc                                                               >  1:625733/1‑150 (MQ=255)
                                                                                    gCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACGGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATcg                                                              >  2:363333/1‑150 (MQ=255)
                                                                                        tAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGaa                                                          >  2:1852575/1‑150 (MQ=255)
                                                                                          cccgTTCTCCTTTCTTCATGTACTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGGACTGCGTATATAAACATCATCCCTTCAAGCCTCTCAGGATGAATTTCAAAACGTGGTTCGTAATGTCGACGTAAAATCGCGAttt                                                        <  2:382108/147‑1 (MQ=255)
                                                                                            ggTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTAt                                                      >  2:229237/1‑150 (MQ=255)
                                                                                             gTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATg                                                     <  2:1346192/150‑1 (MQ=255)
                                                                                             gTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATg                                                     >  2:1070730/1‑150 (MQ=255)
                                                                                              ttCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATgg                                                    >  2:1133196/1‑150 (MQ=255)
                                                                                                cTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGAt                                                  <  1:1490169/150‑1 (MQ=255)
                                                                                                 tGCTTTCTGCATGTAGAGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATc                                                 <  1:83139/150‑1 (MQ=255)
                                                                                                  gCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATc                                                 <  1:757517/149‑1 (MQ=255)
                                                                                                  gCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATc                                                 >  2:757517/1‑149 (MQ=255)
                                                                                                  gCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCa                                                >  1:726010/1‑150 (MQ=255)
                                                                                                  gCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCa                                                >  2:1407321/1‑150 (MQ=255)
                                                                                                  gCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATCGATCa                                                >  1:1677401/1‑150 (MQ=255)
                                                                                                     ttCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTa                                             <  2:716207/150‑1 (MQ=255)
                                                                                                     ttCTGCATGTAGTGCAAATAACACCGCAAAAAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTa                                             <  2:688084/150‑1 (MQ=255)
                                                                                                      tCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTAt                                            <  1:892791/150‑1 (MQ=255)
                                                                                                       cTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATg                                           <  2:57111/150‑1 (MQ=255)
                                                                                                        tGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGc                                          <  2:1767198/150‑1 (MQ=255)
                                                                                                         gCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTtctcag                                                                                                        >  2:917079‑M2/1‑81 (MQ=255)
                                                                                                         gCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTtctcag                                                                                                        <  1:917079‑M2/87‑7 (MQ=255)
                                                                                                         gCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCt                                         >  2:451514/1‑150 (MQ=255)
                                                                                                          cATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTg                                        <  2:457540/150‑1 (MQ=255)
                                                                                                           aggTAGTGCAAAAAACACCGCAAATAATATGCATCCTTATACACTTGCAGTGGGTAGTTAAACATCATAACTGCAAGATTGTAAGGATTAATTTGAAACCTGGTTCTTAATGTCGACGTAAAATCGCGAATTATGGATAATTATGCTGAc                                      <  2:1452248/148‑1 (MQ=255)
                                                                                                               aGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTgg                                   >  1:665194/1‑150 (MQ=255)
                                                                                                               aGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACATGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTgg                                   >  1:718692/1‑150 (MQ=255)
                                                                                                                gTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGa                                  >  2:221680/1‑150 (MQ=255)
                                                                                                                 tGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGaa                                 >  2:44303/1‑150 (MQ=255)
                                                                                                                  gCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGaaa                                >  1:1103570/1‑150 (MQ=255)
                                                                                                                  gCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGaaa                                >  1:1112826/1‑150 (MQ=255)
                                                                                                                  gCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGaaa                                >  1:1561301/1‑150 (MQ=255)
                                                                                                                   cAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGAAAg                               <  2:817981/150‑1 (MQ=255)
                                                                                                                   cAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGAAAg                               <  2:327617/150‑1 (MQ=255)
                                                                                                                    aaaTAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGAAAgg                              <  1:1547173/150‑1 (MQ=255)
                                                                                                                    aaaTAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGCGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTc                                                                          <  1:114673/106‑1 (MQ=255)
                                                                                                                    aaaTAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGAGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTc                                                                          >  2:114673/1‑106 (MQ=255)
                                                                                                                     aaTAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGAAAGGc                             <  2:1934743/150‑1 (MQ=255)
                                                                                                                     aaTAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGAAAGGc                             >  1:1201070/1‑150 (MQ=255)
                                                                                                                      aTAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGAAAGGCg                            <  1:1852575/150‑1 (MQ=255)
                                                                                                                         acacCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGAAAGGCGTAc                         >  2:1851571/1‑150 (MQ=255)
                                                                                                                                aaaGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGAAAGGCGTACGTTATCg                  <  2:275249/150‑1 (MQ=255)
                                                                                                                                aaaGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGAAAGGCGTACGTTATCg                  <  2:1808860/150‑1 (MQ=255)
                                                                                                                                     atatGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTtctcaggatgcatattctttgcggtgttatttgcactacatgcagaaagcagaaccgctactgcaatcgcgggaatcccgcgcaagatatatctcaa             <  2:1031592‑M2/150‑98 (MQ=255)
                                                                                                                                      tatGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGAAAGGCg                            >  1:1001325/1‑134 (MQ=255)
                                                                                                                                      tatGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGAAAGGCg                            <  2:1001325/134‑1 (MQ=255)
                                                                                                                                          cATCCTGAGAagcttgcagtgatgatgtttcactacccactgcacgtgtctcaggatgcatattctttgcggtgttatttgcactacatgcagaaagcagaaccgctactgcaatcgcgggaatcccgcgcaagatatatctcaaaatcg        <  1:296498‑M1/150‑141 (MQ=255)
                                                                                                                                          cATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTtctcaggatgcatattctttgcggtgttatttgcactacatgcagaaagcagaaccgctactgcaatcgcgggaatcccgcgcaagatatatctcaaaatcg        <  2:1895265‑M2/150‑103 (MQ=255)
                                                                                                                                           aTCCTGAGAagcttgcagtgatgatgtttcactacccactgcacgtgtctcaggatgcatattctttgcggtgttatttgcactacatgcagaaagcagaaccgctactgcaatcgcgggaatcccgcgcaagatatatctcaaaatcgg       >  1:829467‑M1/1‑9 (MQ=255)
                                                                                                                                           aTCCTGAGACACGTGCAGTTGGTAGTGAAACATCATCACTTAAAGCTTCTCAGGATGAATTTGAAAACCTTTTTCGTAATGTAGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGAAAGTCGTACGTTTTCGTCTGTGCGgca       <  2:1975397/150‑1 (MQ=255)
                                                                                                                                           aTCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTtctcaggatgcatattctttgcggtgttatttgcactacatgcagaaagcagaaccgctactgcaatcgcgggaatcccgcgcaagatatatctcaaaatcgg       <  1:662726‑M2/150‑104 (MQ=255)
                                                                                                                                            tCCTGAGAagcttgcagtgatgatgtttcactacccactgcacgtgtctcaggatgcatattctttgcggtgttatttgcactacatgcagaaagcagaaccgctactgcaatcgcgggaatcccgcgcaagatatatctcaaaatcggt      >  1:473371‑M1/1‑8 (MQ=255)
                                                                                                                                            tCCTGAGAagcttgcagtgatgatgtttcactacccactgcacgtgtctcaggatgcatattctttgcggtgttatttgcactacatgcagaaagcagaaccgctactgcaatcgcgggaatcccgcgcaagatatatctcaa             >  2:712504‑M1/1‑8 (MQ=255)
                                                                                                                                            tCCTGAGAagcttgcagtgatgatgtttcactacccactgcacgtgtctcaggatgcatattctttgcggtgttatttgcactacatgcagaaagcagaaccgctactgcaatcgcgggaatcccgcgcaagatatatctcaa             <  1:712504‑M1/143‑136 (MQ=255)
                                                                                                                                              cTGAGAagcttgcagtgatgatgtttcactacccactgcacgtgtctcaggatgcatattctttgcggtgttatttgcactacatgc                                                                   <  1:917079‑M1/87‑82 (MQ=255)
                                                                                                                                              cTGAGAagcttgcagtgatgatgtttcactacccactgcacgtgtctcaggatgcatattctttgcggtgttatttgcactacatgc                                                                   >  2:917079‑M1/1‑6 (MQ=255)
                                                                                                                                               tGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGAAAGGCGTACGTTATCGTCTGGGCGGCAGCAc   <  1:1133196/150‑1 (MQ=255)
                                                                                                                                                gagaagcttgcagtgatgatgtttcactacccactgcacgtgtctcaggatgcatattctttgcggtgttatttgcactacatgcagaaagcagaaccgctactgcaatcgcgggaatcccgcgcaagatatatctcaaaatcggttgag  >  1:1989294‑M1/1‑4 (MQ=255)
                                                                                                                                                gagaCACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGAAAGGCGTACGTTATCGTCTGGGCGGCAGCACt  <  1:1550416/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
CGTTAAGGACTTCAAGGGAAAACAAACAACATGGTCAAATCTCAACCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGAAAGGCGTACGTTATCGTCTGGGCGGCAGCACT  >  NC_000913/2269949‑2270242

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.