Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,374,899 T→A 5.4% L11I (TTA→ATA) ‡ dcuD → putative transporter DcuD

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,374,8990TA 5.4% 426.4 / 7.6 131L11I (TTA→ATA) ‡dcuDputative transporter DcuD
Reads supporting (aligned to +/- strand):  ref base T (41/82);  new base A (5/3);  total (46/85)
Fisher's exact test for biased strand distribution p-value = 1.28e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 145 total aligned reads displayed.

CACCTACAATTAAAAACACGACATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATCCCACCAAAAGCAGCGGCTACTTGATCGTCGAT  >  NC_000913/3374750‑3375048
                                                                                                                                                       |                                                                                                                                                     
cacctACAATTAAAAACACGACATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTat                                                                                                                                                       >  1:1620182/1‑150 (MQ=255)
  cctACAATTAAAAACACGACATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTatta                                                                                                                                                     <  1:1901762/150‑1 (MQ=255)
  cctACAATTAAAAACACGACATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGACGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTatta                                                                                                                                                     >  1:468108/1‑150 (MQ=255)
    tACAATTAAAAACACGACATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTattaat                                                                                                                                                   >  1:785421/1‑150 (MQ=255)
     aCAATTAAAAACACGACATCCGCACCATAAATAGCCTTTCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGTAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGtaattaat                                                                                                                                                   <  2:1484561/150‑1 (MQ=255)
      cAATTAAAAACACGACATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTattaatta                                                                                                                                                 <  2:952242/150‑1 (MQ=255)
      cAATTAAAAACACGACATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTattaatta                                                                                                                                                 <  1:1478120/150‑1 (MQ=255)
      cAATTAAAAACACGACATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTattaatta                                                                                                                                                 >  2:1384628/1‑150 (MQ=255)
       aaTTAAAAACACGACATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTAc                                                                                                                                                <  2:710400/150‑1 (MQ=255)
       aaTTAAAAACACGACATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTAc                                                                                                                                                <  1:635218/150‑1 (MQ=255)
       aaTTAAAAACACGACATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTAc                                                                                                                                                >  2:759801/1‑150 (MQ=255)
       aaTTAAAAACACGACATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTAc                                                                                                                                                >  1:1749183/1‑150 (MQ=255)
        aTTAAAAACACGACATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACg                                                                                                                                               >  1:1712944/1‑150 (MQ=255)
           aaaaaCACGACATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATg                                                                                                                                            <  2:451988/150‑1 (MQ=255)
           aaaaaCACGACATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATg                                                                                                                                            >  2:563437/1‑150 (MQ=255)
           aaaaaCACGACATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATg                                                                                                                                            <  1:339013/150‑1 (MQ=255)
             aaaCACGACATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATggg                                                                                                                                          <  1:14021/150‑1 (MQ=255)
              aaCACTACATCAGCACCATAAATATCGTTGCAAAAAATATTAGTTCGTTGTTTTAAATCTGCCGTTTATGGGATTGAACGTTTTCTTTTGACACGGAGTTAATCAATGTTATTCATAATTATATCTGTCATCGTATTAATTACGATGGGc                                                                                                                                         <  2:524799/150‑1 (MQ=255)
              aaCACGACATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGc                                                                                                                                         <  1:1914539/150‑1 (MQ=255)
                     cATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCt                                                                                                                                        <  2:871090/144‑1 (MQ=255)
                     cATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCt                                                                                                                                        >  1:871090/1‑144 (MQ=255)
                     cATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGa                                                                                                                                  >  2:1688361/1‑150 (MQ=255)
                      aTCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGAt                                                                                                                                 <  2:138715/150‑1 (MQ=255)
                      aTCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGAt                                                                                                                                 <  1:387228/150‑1 (MQ=255)
                       tCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATc                                                                                                                                >  1:23200/1‑150 (MQ=255)
                        ccGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATcc                                                                                                                               <  1:679216/150‑1 (MQ=255)
                        ccGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATcc                                                                                                                               <  1:1933245/150‑1 (MQ=255)
                        ccGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATcc                                                                                                                               <  1:1418505/150‑1 (MQ=255)
                             ccATAAATAGCCTTGCAAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGaa                                                                                                                           <  1:1266008/150‑1 (MQ=255)
                             acATAAATAGCCTTGCAAAAAATATAACATCCTTGTTTTAAATCTGCCGTTTATGGTATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGTGCTATTTGATCCTGaaa                                                                                                                          <  2:270937/149‑1 (MQ=255)
                              cATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGaaaa                                                                                                                         >  1:1635344/1‑150 (MQ=255)
                                 aaaTAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACt                                                                                                                      >  1:1102104/1‑150 (MQ=255)
                                  aaTAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTa                                                                                                                     <  2:1970044/150‑1 (MQ=255)
                                   aTAGCCTTTCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTAc                                                                                                                    <  2:463443/150‑1 (MQ=255)
                                   aTAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTAc                                                                                                                    <  2:1984787/150‑1 (MQ=255)
                                    tAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACa                                                                                                                   <  2:1643605/150‑1 (MQ=255)
                                        cTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAAcc                                                                                                               <  2:364891/150‑1 (MQ=255)
                                        cTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAAcc                                                                                                               >  1:671653/1‑150 (MQ=255)
                                           gCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCa                                                                                                            >  2:1220232/1‑150 (MQ=255)
                                              aaaaaaTATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAgg                                                                                                          >  2:1540874/1‑150 (MQ=255)
                                                aaaaTATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAggtg                                                                                                        <  2:819448/150‑1 (MQ=255)
                                                aaaaTATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAggtg                                                                                                        <  2:1807855/150‑1 (MQ=255)
                                                  aaTATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAggtggt                                                                                                      <  1:234346/150‑1 (MQ=255)
                                                    tataACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTgc                                                                                                    <  1:759801/150‑1 (MQ=255)
                                                     ataACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTgct                                                                                                   <  2:671653/150‑1 (MQ=255)
                                                        aCATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTgctggc                                                                                                <  2:1635344/150‑1 (MQ=255)
                                                         cATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTgctggct                                                                                               <  1:1220232/150‑1 (MQ=255)
                                                         cATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTgctggct                                                                                               >  1:1012698/1‑150 (MQ=255)
                                                          aTCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTgctggctg                                                                                              <  1:563437/150‑1 (MQ=255)
                                                              ttgttTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGc                                                                                          >  1:957098/1‑150 (MQ=255)
                                                              ttgttTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGc                                                                                          <  1:612142/150‑1 (MQ=255)
                                                               tgttTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCa                                                                                         >  1:273175/1‑150 (MQ=255)
                                                                 ttttCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAgg                                                                                       <  2:120290/150‑1 (MQ=255)
                                                                  tttCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTATAAAcc                                                                                                               <  2:311757/125‑1 (MQ=255)
                                                                  tttCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTATAAAcc                                                                                                               >  1:311757/1‑125 (MQ=255)
                                                                  tttCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGt                                                                                      <  2:149421/150‑1 (MQ=255)
                                                                  tttCAATCTGACGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGt                                                                                      <  2:468108/150‑1 (MQ=255)
                                                                     cAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATc                                                                                   <  1:1357572/150‑1 (MQ=255)
                                                                     cAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATc                                                                                   <  1:1543051/150‑1 (MQ=255)
                                                                     cAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATc                                                                                   <  1:1550373/150‑1 (MQ=255)
                                                                         cTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTcc                                                                               <  1:1037841/150‑1 (MQ=255)
                                                                          tGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCt                                                                              >  1:185395/1‑150 (MQ=255)
                                                                          tGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCt                                                                              <  1:481012/150‑1 (MQ=255)
                                                                             cGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCtgat                                                                           >  1:1748267/1‑150 (MQ=255)
                                                                                 tATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGatgatg                                                                       <  2:1930029/150‑1 (MQ=255)
                                                                                 tATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGatgatg                                                                       >  1:1571253/1‑150 (MQ=255)
                                                                                  aTGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGAtgt                                                                      <  1:699471/150‑1 (MQ=255)
                                                                                    gggATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGc                                                                    <  1:414775/150‑1 (MQ=255)
                                                                                            ccGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTg                                                            >  2:1083923/1‑150 (MQ=255)
                                                                                              gTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTattaat                                                                                                                                                   >  1:509220/1‑61 (MQ=255)
                                                                                              gTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTattaat                                                                                                                                                   <  2:509220/61‑1 (MQ=255)
                                                                                               ttttCTTTTGACACTGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGtt                                                         >  1:49888/1‑150 (MQ=255)
                                                                                               ttttCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGtt                                                         <  1:575821/150‑1 (MQ=255)
                                                                                                   cTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAggg                                                     <  2:856256/150‑1 (MQ=255)
                                                                                                   cTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAggg                                                     <  2:1102104/150‑1 (MQ=255)
                                                                                                        gACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCgg                                                >  1:902850/1‑150 (MQ=255)
                                                                                                            cGGAGTTCAACAATGGTCGGCATAATTATATCTGTCATCGTAATAATTACGATGGGGTATTTGATCCTGAAAAACTAAAAACCTCAGGGGGTGATGGCTGCCGCAGGTATCGTCCTGATGATGTGCGGTGTCTCGTTAGTCTTCggtggg                                            >  2:430605/1‑149 (MQ=255)
                                                                                                             ggAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTTCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGgtggtg                                           <  2:1343803/150‑1 (MQ=255)
                                                                                                             ggAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGgtggtg                                           <  1:1578232/150‑1 (MQ=255)
                                                                                                              gAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGgtgt                                          <  2:1298796/150‑1 (MQ=255)
                                                                                                                 ttCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACt                                       <  1:1384628/150‑1 (MQ=255)
                                                                                                                      caaTGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATc                                  <  1:409380/150‑1 (MQ=255)
                                                                                                                        aTGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGGTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATccc                                >  2:876030/1‑150 (MQ=255)
                                                                                                                              ggCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATCCCACCaaa                          >  1:159539/1‑150 (MQ=255)
                                                                                                                                  tAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATCCCACCAAAagca                      <  2:395322/150‑1 (MQ=255)
                                                                                                                                   aaTTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATCCCACCAAAagcag                     >  2:932497/1‑150 (MQ=255)
                                                                                                                                   aaTTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATCCCACCAAAagcag                     <  2:1712944/150‑1 (MQ=255)
                                                                                                                                    aTTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATCCCACCAAAagcagc                    >  1:975944/1‑150 (MQ=255)
                                                                                                                                         atagcccATCGTAATTAATACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATCCCACCAAAAGCAGCGGCTa               >  1:1025624/7‑150 (MQ=255)
                                                                                                                                           cTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGAAGATGTGCGGTGTCTGGTTAggg                                                     >  2:1572997/1‑110 (MQ=255)
                                                                                                                                           cTGTCATCGTATTAATTACGATGGGCTATTTGATCCAGAAAAACTAAAAACCTCAGGTGGTGCTGGCTGCCGCAGGGATCTTCCTGATGATGTGCGGTGTCTGGTTATGGTTCGGTGGTGTACTCGATCCCACCAAAAGCCGCGGCGAca             >  2:340802/1‑149 (MQ=255)
                                                                                                                                           agcccATCGTAATTAATACGATGGGCTAGTTGATCCTGAAAAACTACAAACATCAGGTGGAGCAGGCTCCCGCAGGAATCTTCCTGATGCTGTGAGGTCGCTGCTTAGGGTTCGGTGGTGTACTCGATCCCCCAAAAACCAGCGGCTACt             >  2:1309345/5‑150 (MQ=255)
                                                                                                                                            gcccATCGTAATTAATACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATCCCACCAAAAGCAGCGGCTACtt            >  1:1428228/4‑150 (MQ=255)
                                                                                                                                             gTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATCCCACCAAAAGCAGCGGCTACTTg           >  2:407399/1‑150 (MQ=255)
                                                                                                                                              ccATCGTAATTAATACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATCCCCCCAAAAGCCGCGGCTACTTGa          >  2:1630029/2‑150 (MQ=255)
                                                                                                                                                aTCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATCCCACCAAAAGCAGCGGCTACTTGAtc        >  1:294686/1‑150 (MQ=255)
                                                                                                                                                    tATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATCCCACCAAAAGCAGCGGCTACTTGAtcgtcg    <  2:49888/150‑1 (MQ=255)
                                                                                                                                                    tATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATCCCACCAAAAGCAGCGGCTACTTGAtcgtcg    <  1:523653/150‑1 (MQ=255)
                                                                                                                                                      attaattaCGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATCCCACCAAAAGCAGCGGCTACTTGATCGTCGa   <  1:1083923/150‑1 (MQ=255)
                                                                                                                                                       ttaattaCGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATCCCACCAAAAGCAGCGGCTACTTGATCGTCGat  <  2:273175/150‑1 (MQ=255)
                                                                                                                                                       |                                                                                                                                                     
CACCTACAATTAAAAACACGACATCCGCACCATAAATAGCCTTGCAAAAAATATAACATCGTTGTTTTCAATCTGCCGTTTATGGGATTGACCGTTTTCTTTTGACACGGAGTTCAACAATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATCCCACCAAAAGCAGCGGCTACTTGATCGTCGAT  >  NC_000913/3374750‑3375048

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: